BLASTX nr result

ID: Glycyrrhiza23_contig00028882 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00028882
         (560 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003536978.1| PREDICTED: uncharacterized protein LOC100807...   101   9e-20
ref|XP_003606513.1| CCR4-NOT transcription complex subunit [Medi...    69   5e-10
ref|XP_003539741.1| PREDICTED: uncharacterized protein LOC100801...    66   3e-09
ref|XP_003539106.1| PREDICTED: uncharacterized protein LOC100813...    66   3e-09
ref|XP_002314205.1| predicted protein [Populus trichocarpa] gi|2...    64   2e-08

>ref|XP_003536978.1| PREDICTED: uncharacterized protein LOC100807521 [Glycine max]
          Length = 896

 Score =  101 bits (251), Expect = 9e-20
 Identities = 50/61 (81%), Positives = 53/61 (86%)
 Frame = -3

Query: 558 QSDSYRISSRFLDQFQSNTPSIYEQLHSQQFSSNFLASNNQWGGLNDAKYFSGLSMSEVL 379
           Q+DSYRISSRFLDQF  N+PSIYEQLHSQQFSSN L SNNQWGG NDAK FS LS+SE L
Sbjct: 771 QNDSYRISSRFLDQFPPNSPSIYEQLHSQQFSSNTLPSNNQWGGWNDAKNFSDLSISENL 830

Query: 378 N 376
           N
Sbjct: 831 N 831


>ref|XP_003606513.1| CCR4-NOT transcription complex subunit [Medicago truncatula]
            gi|355507568|gb|AES88710.1| CCR4-NOT transcription
            complex subunit [Medicago truncatula]
          Length = 1223

 Score = 68.9 bits (167), Expect = 5e-10
 Identities = 39/85 (45%), Positives = 53/85 (62%)
 Frame = -3

Query: 552  DSYRISSRFLDQFQSNTPSIYEQLHSQQFSSNFLASNNQWGGLNDAKYFSGLSMSEVLNN 373
            DSY +SSR LDQ Q +  + Y QL  QQ S+N + SN QW G N+ +  +GL ++E+L N
Sbjct: 977  DSYGVSSR-LDQSQVSNLAPYPQLSMQQ-STNAILSNGQWNGWNEVQSGNGLGVAELLRN 1034

Query: 372  ERGGFNNFMPSYGNIKF*APAWTDL 298
            ER GFN F P Y + K+  P   D+
Sbjct: 1035 ERLGFNKFYPGYDDSKYRMPNSGDI 1059


>ref|XP_003539741.1| PREDICTED: uncharacterized protein LOC100801880 [Glycine max]
          Length = 1022

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 39/85 (45%), Positives = 52/85 (61%)
 Frame = -3

Query: 552  DSYRISSRFLDQFQSNTPSIYEQLHSQQFSSNFLASNNQWGGLNDAKYFSGLSMSEVLNN 373
            DSY +SSR LDQ Q +    ++QL  QQ S+N + SN QW G N+ +  +GL ++E+L N
Sbjct: 933  DSYAVSSR-LDQSQVSNLGPFQQLSLQQ-STNAVLSNGQWDGWNEVQSGNGLGVAELLRN 990

Query: 372  ERGGFNNFMPSYGNIKF*APAWTDL 298
            ER GFN F   Y + KF  P   DL
Sbjct: 991  ERLGFNKFYSGYDDSKFRMPNSGDL 1015


>ref|XP_003539106.1| PREDICTED: uncharacterized protein LOC100813427 [Glycine max]
          Length = 1023

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 39/85 (45%), Positives = 52/85 (61%)
 Frame = -3

Query: 552  DSYRISSRFLDQFQSNTPSIYEQLHSQQFSSNFLASNNQWGGLNDAKYFSGLSMSEVLNN 373
            DSY +SSR LDQ Q +    ++QL  QQ S+N + SN QW G N+ +  +GL ++E+L N
Sbjct: 934  DSYAVSSR-LDQSQVSNLGPFQQLSLQQ-STNAVLSNGQWDGWNEVQSGNGLGVAELLRN 991

Query: 372  ERGGFNNFMPSYGNIKF*APAWTDL 298
            ER GFN F   Y + KF  P   DL
Sbjct: 992  ERLGFNKFYSGYDDSKFRMPNSGDL 1016


>ref|XP_002314205.1| predicted protein [Populus trichocarpa] gi|222850613|gb|EEE88160.1|
           predicted protein [Populus trichocarpa]
          Length = 378

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 40/87 (45%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
 Frame = -3

Query: 555 SDSYRISSRFLDQFQSNTPSIYEQLHSQQFSSNFLASNNQWGGLNDAKYFSGLSMSEVLN 376
           +DS+ ISSR +DQ Q +  S Y QL  QQ S N L  N +W G N+ +  + L M+E+L 
Sbjct: 286 NDSFGISSRLVDQSQISGLSPYAQLSLQQ-SRNGLVPNGRWDGWNEVQGGNSLRMTELLR 344

Query: 375 NERGGFNNFMPS-YGNIKF*APAWTDL 298
           NER GFN F  S Y + KF  P+  DL
Sbjct: 345 NERVGFNKFYTSGYEDSKFRMPSSDDL 371


Top