BLASTX nr result

ID: Glycyrrhiza23_contig00028878 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00028878
         (548 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK40144.1| unknown [Lotus japonicus]                              263   2e-68
ref|XP_003628965.1| Actin-related protein 2/3 complex subunit [M...   256   2e-67
ref|XP_003531940.1| PREDICTED: actin-related protein 2/3 complex...   256   1e-66
gb|ACU16394.1| unknown [Glycine max]                                  255   4e-66
ref|XP_003547807.1| PREDICTED: actin-related protein 2/3 complex...   248   6e-64

>gb|AFK40144.1| unknown [Lotus japonicus]
          Length = 324

 Score =  263 bits (671), Expect = 2e-68
 Identities = 133/154 (86%), Positives = 139/154 (90%)
 Frame = -2

Query: 463 MILLQSHSRFLLQSLLNRVQNLEKGVELDHHWVEFDDVRYHIQVSMKNPHIXXXXXXXXX 284
           MILLQSHSRFLLQ+LLNR QN+EKGVELDHHWVEFDDVRYHIQVSMKNPHI         
Sbjct: 1   MILLQSHSRFLLQTLLNRAQNIEKGVELDHHWVEFDDVRYHIQVSMKNPHILLLSVSLPT 60

Query: 283 XXSETIFVNGLPFGAIEAIKAAYGGLVQILDPPRDGFNLTLKINLSKIPANQEPRHSFLV 104
             SETIFV GLPFGAIEAIKA YGG+VQILDPP+DGFNLTLKINLSKIPANQE RH+FLV
Sbjct: 61  PSSETIFVCGLPFGAIEAIKATYGGIVQILDPPKDGFNLTLKINLSKIPANQEQRHAFLV 120

Query: 103 KVASVREVVLGAPLRVILKHLASRTVAPDMDPLV 2
           KVASVREVVLGAPLRVILKHLASRTVAPDMDP+V
Sbjct: 121 KVASVREVVLGAPLRVILKHLASRTVAPDMDPVV 154


>ref|XP_003628965.1| Actin-related protein 2/3 complex subunit [Medicago truncatula]
           gi|355522987|gb|AET03441.1| Actin-related protein 2/3
           complex subunit [Medicago truncatula]
          Length = 375

 Score =  256 bits (655), Expect(2) = 2e-67
 Identities = 132/155 (85%), Positives = 138/155 (89%)
 Frame = -2

Query: 466 SMILLQSHSRFLLQSLLNRVQNLEKGVELDHHWVEFDDVRYHIQVSMKNPHIXXXXXXXX 287
           SMILLQSHSRFLLQ+LLNR+QN+EKGVELDHHWVEFDDVRYHIQVSMKNP+I        
Sbjct: 51  SMILLQSHSRFLLQTLLNRLQNIEKGVELDHHWVEFDDVRYHIQVSMKNPNIFLLSVSLP 110

Query: 286 XXXSETIFVNGLPFGAIEAIKAAYGGLVQILDPPRDGFNLTLKINLSKIPANQEPRHSFL 107
              SETIFV GLPFGAIEAIKAAYG LVQILDPPRDGFNLTLKINLSK+PANQE R + L
Sbjct: 111 TPSSETIFVCGLPFGAIEAIKAAYGSLVQILDPPRDGFNLTLKINLSKVPANQEQRQALL 170

Query: 106 VKVASVREVVLGAPLRVILKHLASRTVAPDMDPLV 2
           VKVASVREVVLGAPLRVILKHLASR VAPDMDPLV
Sbjct: 171 VKVASVREVVLGAPLRVILKHLASRNVAPDMDPLV 205



 Score = 24.6 bits (52), Expect(2) = 2e-67
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -3

Query: 546 KKRIALDLKPSINQYHQYHHQAER 475
           KKRI LDL    N ++  HH  ++
Sbjct: 7   KKRIGLDLSECNNTHNHNHHHHQK 30


>ref|XP_003531940.1| PREDICTED: actin-related protein 2/3 complex subunit 2-like
           [Glycine max]
          Length = 324

 Score =  256 bits (655), Expect = 1e-66
 Identities = 130/154 (84%), Positives = 138/154 (89%)
 Frame = -2

Query: 463 MILLQSHSRFLLQSLLNRVQNLEKGVELDHHWVEFDDVRYHIQVSMKNPHIXXXXXXXXX 284
           MILLQSHSRFLLQ+LLNR QNLEKGVELDHHWVEFDDVRYHIQVSMKNPH+         
Sbjct: 1   MILLQSHSRFLLQTLLNRAQNLEKGVELDHHWVEFDDVRYHIQVSMKNPHVLLLSVSLPT 60

Query: 283 XXSETIFVNGLPFGAIEAIKAAYGGLVQILDPPRDGFNLTLKINLSKIPANQEPRHSFLV 104
             SETIFV GLPFGAIEAIKAAYG LVQILDPPRDGFNLTLKINLSK+PANQE +H+FLV
Sbjct: 61  PSSETIFVCGLPFGAIEAIKAAYGNLVQILDPPRDGFNLTLKINLSKLPANQEQKHAFLV 120

Query: 103 KVASVREVVLGAPLRVILKHLASRTVAPDMDPLV 2
           KVAS+REVVLGAPLRVIL+HLA+RTVA DMDPLV
Sbjct: 121 KVASIREVVLGAPLRVILEHLAARTVALDMDPLV 154


>gb|ACU16394.1| unknown [Glycine max]
          Length = 194

 Score =  255 bits (651), Expect = 4e-66
 Identities = 128/154 (83%), Positives = 137/154 (88%)
 Frame = -2

Query: 463 MILLQSHSRFLLQSLLNRVQNLEKGVELDHHWVEFDDVRYHIQVSMKNPHIXXXXXXXXX 284
           MILLQSHSRFL Q+LLNR QNLEKGVELDHHWVEFDDVRYHIQVSMKNPH+         
Sbjct: 1   MILLQSHSRFLFQTLLNRAQNLEKGVELDHHWVEFDDVRYHIQVSMKNPHVLLLSVSLPT 60

Query: 283 XXSETIFVNGLPFGAIEAIKAAYGGLVQILDPPRDGFNLTLKINLSKIPANQEPRHSFLV 104
             SETIFV G PFGAIEAIKAAYG LVQILDPPRDGFNLTLKINLSK+PANQE +H+FLV
Sbjct: 61  PSSETIFVCGPPFGAIEAIKAAYGNLVQILDPPRDGFNLTLKINLSKLPANQEQKHAFLV 120

Query: 103 KVASVREVVLGAPLRVILKHLASRTVAPDMDPLV 2
           KVAS+REVVLGAPLRVIL+HLA+RTVAPD+DPLV
Sbjct: 121 KVASIREVVLGAPLRVILEHLAARTVAPDLDPLV 154


>ref|XP_003547807.1| PREDICTED: actin-related protein 2/3 complex subunit 2 [Glycine
           max]
          Length = 320

 Score =  248 bits (632), Expect = 6e-64
 Identities = 126/154 (81%), Positives = 134/154 (87%)
 Frame = -2

Query: 463 MILLQSHSRFLLQSLLNRVQNLEKGVELDHHWVEFDDVRYHIQVSMKNPHIXXXXXXXXX 284
           MILLQSH RFL Q LL   QNLEKGVELDHHWVEFDDVRYHIQVSMKNPH+         
Sbjct: 1   MILLQSHFRFLFQPLLIGPQNLEKGVELDHHWVEFDDVRYHIQVSMKNPHVLLLSVSLPT 60

Query: 283 XXSETIFVNGLPFGAIEAIKAAYGGLVQILDPPRDGFNLTLKINLSKIPANQEPRHSFLV 104
             SETIFV GLPFGAIEAIKAAYG LVQILDPPRDGFNLTLKINLSK+PANQE +H+FLV
Sbjct: 61  PSSETIFVCGLPFGAIEAIKAAYGNLVQILDPPRDGFNLTLKINLSKLPANQEQKHAFLV 120

Query: 103 KVASVREVVLGAPLRVILKHLASRTVAPDMDPLV 2
           KVAS+REVVLGAPLRVIL+HLA+RTVAPD+DPLV
Sbjct: 121 KVASIREVVLGAPLRVILEHLAARTVAPDLDPLV 154


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