BLASTX nr result

ID: Glycyrrhiza23_contig00028875 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00028875
         (627 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001239882.1| uncharacterized protein LOC100815663 [Glycin...   129   6e-28
ref|XP_002273649.1| PREDICTED: NAC domain-containing protein 68 ...    86   4e-15
ref|XP_002328928.1| NAC domain protein, IPR003441 [Populus trich...    83   5e-14
ref|XP_002298652.1| NAC domain protein, IPR003441 [Populus trich...    82   6e-14
ref|XP_002512886.1| transcription factor, putative [Ricinus comm...    82   8e-14

>ref|NP_001239882.1| uncharacterized protein LOC100815663 [Glycine max]
           gi|255642301|gb|ACU21415.1| unknown [Glycine max]
          Length = 217

 Score =  129 bits (323), Expect = 6e-28
 Identities = 76/136 (55%), Positives = 92/136 (67%)
 Frame = +2

Query: 23  KRHAGSGYWKSIGKDKQIVASSGRSNQVIGMRKTLVFWKGGKGLSHETRTRWVMHELRLV 202
           KR AGSG WKS+GK+KQI+ S   SNQVIGM++TL F KG    SHETRT+WVMHELRLV
Sbjct: 80  KRPAGSGCWKSVGKEKQIIHSE--SNQVIGMKETLFFCKG----SHETRTQWVMHELRLV 133

Query: 203 SSGVTSDPCQMPWEDFAVYRIFQNXXXXXXXXXXPNQRFSSSREVRRVDDDIKASFIDFK 382
           +    S PCQMP  DFAVYRIFQ             ++ SSS +++R+  D+KASF DF 
Sbjct: 134 A----SYPCQMPVADFAVYRIFQKNKMKTRRSH--GKKPSSSSKLQRL-VDVKASFFDFT 186

Query: 383 VEEFDDNTGTPPPCSP 430
           V+   D+ G P PCSP
Sbjct: 187 VDFNHDDIGPPTPCSP 202


>ref|XP_002273649.1| PREDICTED: NAC domain-containing protein 68 [Vitis vinifera]
           gi|147820260|emb|CAN71479.1| hypothetical protein
           VITISV_038623 [Vitis vinifera]
          Length = 241

 Score = 86.3 bits (212), Expect = 4e-15
 Identities = 59/141 (41%), Positives = 77/141 (54%), Gaps = 3/141 (2%)
 Frame = +2

Query: 23  KRHAGSGYWKSIGKDKQIVASSGRSNQVIGMRKTLVFWKGGKGLSHETRTRWVMHELRLV 202
           +R  G GYWK+IGKD QIVAS   S++ +GM++TLVF++G  G    TRT+WVMHE RLV
Sbjct: 82  RRVTGCGYWKAIGKDIQIVASG--SSRAVGMKRTLVFYEGKLGAG--TRTQWVMHEYRLV 137

Query: 203 SSGV---TSDPCQMPWEDFAVYRIFQNXXXXXXXXXXPNQRFSSSREVRRVDDDIKASFI 373
             G    ++  C    ED+ VYR+FQ           P +   SS+      ++   S I
Sbjct: 138 GLGTAPSSTQKCVEEMEDWVVYRMFQK-------RRRPKRHGVSSQP---STNNKAQSII 187

Query: 374 DFKVEEFDDNTGTPPPCSPMS 436
           D  VE   D  G P P SP S
Sbjct: 188 DLVVENSSD-PGPPQPYSPSS 207


>ref|XP_002328928.1| NAC domain protein, IPR003441 [Populus trichocarpa]
           gi|222839358|gb|EEE77695.1| NAC domain protein,
           IPR003441 [Populus trichocarpa]
          Length = 247

 Score = 82.8 bits (203), Expect = 5e-14
 Identities = 59/139 (42%), Positives = 73/139 (52%), Gaps = 4/139 (2%)
 Frame = +2

Query: 23  KRHAGSG---YWKSIGKDKQIVASSGRSNQVIGMRKTLVFWKGGKGLSHETRTRWVMHEL 193
           KR AGSG   YWK IGK KQIVAS   SN+ +G RKTLVF +  +  S +TR++WVMH  
Sbjct: 83  KRTAGSGPSGYWKPIGKGKQIVASD--SNKAVGTRKTLVFKE--RKHSIKTRSQWVMHGY 138

Query: 194 RLVSSGVTSDPCQM-PWEDFAVYRIFQNXXXXXXXXXXPNQRFSSSREVRRVDDDIKASF 370
            L  S       QM    D+  Y +FQ            N   S+  E R V + I  SF
Sbjct: 139 CLAGSATGPKTTQMEEVGDWVAYSVFQRKRKPRKNVVISNP--SNINETRNV-EIISPSF 195

Query: 371 IDFKVEEFDDNTGTPPPCS 427
           +DF +E+  D  G P PCS
Sbjct: 196 MDFMMEQSSDGVGPPSPCS 214


>ref|XP_002298652.1| NAC domain protein, IPR003441 [Populus trichocarpa]
           gi|222845910|gb|EEE83457.1| NAC domain protein,
           IPR003441 [Populus trichocarpa]
          Length = 244

 Score = 82.4 bits (202), Expect = 6e-14
 Identities = 57/138 (41%), Positives = 74/138 (53%), Gaps = 3/138 (2%)
 Frame = +2

Query: 23  KRHAG---SGYWKSIGKDKQIVASSGRSNQVIGMRKTLVFWKGGKGLSHETRTRWVMHEL 193
           KR AG   SGYWK +GK KQIVAS   SNQ +G+RKTLVF +  +  S +TRT+WVMHE 
Sbjct: 83  KRSAGYIPSGYWKPVGKGKQIVASG--SNQAVGIRKTLVFRE--RNHSSKTRTQWVMHEY 138

Query: 194 RLVSSGVTSDPCQMPWEDFAVYRIFQNXXXXXXXXXXPNQRFSSSREVRRVDDDIKASFI 373
            LV  G+ +DP      D+    IF             +    S+   R+  + I  SF+
Sbjct: 139 CLV--GLPTDPKTTQVGDWVANSIFHRKRKPKNHVVMISN--PSNINKRQNVEIISPSFM 194

Query: 374 DFKVEEFDDNTGTPPPCS 427
           DF +E+  D  G P  CS
Sbjct: 195 DFMMEQSSDEAGAPSQCS 212


>ref|XP_002512886.1| transcription factor, putative [Ricinus communis]
           gi|223547897|gb|EEF49389.1| transcription factor,
           putative [Ricinus communis]
          Length = 242

 Score = 82.0 bits (201), Expect = 8e-14
 Identities = 51/142 (35%), Positives = 79/142 (55%), Gaps = 3/142 (2%)
 Frame = +2

Query: 20  SKRHAGSGYWKSIGKDKQIVASSGRSNQVIGMRKTLVFWKGGKGLSHETRTRWVMHELRL 199
           ++R AGSGYWK  GK + I+AS G  N ++G+RKT +F +G     +E++T+W+MHE RL
Sbjct: 82  NRRAAGSGYWKPTGKGRPIIASFG--NHIVGLRKTFLFCEGKN--PNESKTQWIMHEYRL 137

Query: 200 VSSGV---TSDPCQMPWEDFAVYRIFQNXXXXXXXXXXPNQRFSSSREVRRVDDDIKASF 370
           V SG    TS   ++   D+ VYR+FQ             ++ + S+      + + +SF
Sbjct: 138 VGSGTLLNTSQVFKLNLGDWVVYRVFQK-------KRRSKKQGTISKSSSTCSEVMSSSF 190

Query: 371 IDFKVEEFDDNTGTPPPCSPMS 436
           ++F + E  D    P P SP S
Sbjct: 191 MEFTMVECSD--VGPQPSSPCS 210


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