BLASTX nr result

ID: Glycyrrhiza23_contig00028860 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00028860
         (514 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003593218.1| Methyl binding domain protein [Medicago trun...   174   7e-42
ref|NP_001235956.1| uncharacterized protein LOC100526917 [Glycin...   166   2e-39
ref|XP_002264947.2| PREDICTED: uncharacterized protein LOC100260...   131   6e-29
emb|CAN64936.1| hypothetical protein VITISV_021553 [Vitis vinifera]   131   6e-29
ref|XP_002300183.1| predicted protein [Populus trichocarpa] gi|2...   103   1e-20

>ref|XP_003593218.1| Methyl binding domain protein [Medicago truncatula]
            gi|355482266|gb|AES63469.1| Methyl binding domain protein
            [Medicago truncatula]
          Length = 805

 Score =  174 bits (441), Expect = 7e-42
 Identities = 85/108 (78%), Positives = 93/108 (86%)
 Frame = -1

Query: 511  ELRLDEIGALEYDFASAQGSLDVPTELANNTVVERTHASSVQFESQEVMLNVDNRNQLTT 332
            ELRL++IG+LEYDFAS  GSLDV TELAN+ VV+ T  SS    SQEVMLN+D +NQLTT
Sbjct: 696  ELRLEDIGSLEYDFASVPGSLDVSTELANDIVVQGTCTSSAHSASQEVMLNMDYKNQLTT 755

Query: 331  VCVWCGIEFNHEAVNSEIQQDSVGFMCPACKAKISGQINVLDSGSPNA 188
             CVWCGIEFNH+AVNSEIQ DSVGFMCP CKAKISGQINVLDSGSPNA
Sbjct: 756  TCVWCGIEFNHDAVNSEIQSDSVGFMCPVCKAKISGQINVLDSGSPNA 803


>ref|NP_001235956.1| uncharacterized protein LOC100526917 [Glycine max]
           gi|255631145|gb|ACU15938.1| unknown [Glycine max]
          Length = 169

 Score =  166 bits (419), Expect = 2e-39
 Identities = 88/113 (77%), Positives = 91/113 (80%), Gaps = 3/113 (2%)
 Frame = -1

Query: 514 QELRLDEIGALEYDFASAQGSL--DVPTELANNTVVERTHASSVQFESQEVMLNVDNRNQ 341
           QELR DEI   E DFA  Q S   DVPTEL NNTVVE T AS VQFESQ VMLN+  RNQ
Sbjct: 55  QELRFDEIDTAECDFARVQVSPLPDVPTELTNNTVVEGTCASPVQFESQVVMLNIGGRNQ 114

Query: 340 LTTVCVWCGIEFNHEAVNSEIQQDSVGFMCPACKAKISGQINV-LDSGSPNAG 185
           LTTVCVWCGIEFNH+AVNSEIQ DSV FMCPACKAKISGQ+NV LD GSPNAG
Sbjct: 115 LTTVCVWCGIEFNHDAVNSEIQPDSVRFMCPACKAKISGQVNVLLDCGSPNAG 167


>ref|XP_002264947.2| PREDICTED: uncharacterized protein LOC100260704 [Vitis vinifera]
          Length = 403

 Score =  131 bits (329), Expect = 6e-29
 Identities = 64/115 (55%), Positives = 82/115 (71%), Gaps = 3/115 (2%)
 Frame = -1

Query: 514 QELRLDEIGALEYDFASAQGSLDVPTE---LANNTVVERTHASSVQFESQEVMLNVDNRN 344
           +EL+LDEI +L++ F + QG L +P     L N   +E    SS+ FE +EVML++  R+
Sbjct: 288 EELKLDEIESLKFGFVTEQGPLSLPEVHMGLENGATMEDGFDSSIGFEPEEVMLSMTGRH 347

Query: 343 QLTTVCVWCGIEFNHEAVNSEIQQDSVGFMCPACKAKISGQINVLDSGSPNAGHH 179
           QLTT CVWC +EF+HEAV SE+Q DSVGFMCP CK+KISGQ+NVLDSG     HH
Sbjct: 348 QLTTACVWCRVEFSHEAVESEMQSDSVGFMCPTCKSKISGQLNVLDSGLSMNPHH 402


>emb|CAN64936.1| hypothetical protein VITISV_021553 [Vitis vinifera]
          Length = 849

 Score =  131 bits (329), Expect = 6e-29
 Identities = 64/115 (55%), Positives = 82/115 (71%), Gaps = 3/115 (2%)
 Frame = -1

Query: 514  QELRLDEIGALEYDFASAQGSLDVPTE---LANNTVVERTHASSVQFESQEVMLNVDNRN 344
            +EL+LDEI +L++ F + QG L +P     L N   +E    SS+ FE +EVML++  R+
Sbjct: 734  EELKLDEIESLKFGFVTEQGPLSLPEVHMGLENGATMEDGFDSSIGFEPEEVMLSMTGRH 793

Query: 343  QLTTVCVWCGIEFNHEAVNSEIQQDSVGFMCPACKAKISGQINVLDSGSPNAGHH 179
            QLTT CVWC +EF+HEAV SE+Q DSVGFMCP CK+KISGQ+NVLDSG     HH
Sbjct: 794  QLTTACVWCRVEFSHEAVESEMQSDSVGFMCPTCKSKISGQLNVLDSGLSMNPHH 848


>ref|XP_002300183.1| predicted protein [Populus trichocarpa] gi|222847441|gb|EEE84988.1|
            predicted protein [Populus trichocarpa]
          Length = 837

 Score =  103 bits (257), Expect = 1e-20
 Identities = 52/103 (50%), Positives = 71/103 (68%), Gaps = 3/103 (2%)
 Frame = -1

Query: 511  ELRLDEIGALEYDFASAQGSL---DVPTELANNTVVERTHASSVQFESQEVMLNVDNRNQ 341
            EL+LDEI  L++   + Q  +   +VP  L N T +E  + +S+QFES  ++   D   Q
Sbjct: 737  ELKLDEIEHLKFSLGTGQEPMSLHEVPLGLGNITEMEAAYDASLQFESDVIVDTADR--Q 794

Query: 340  LTTVCVWCGIEFNHEAVNSEIQQDSVGFMCPACKAKISGQINV 212
            LTTVCVWCG EF+HEA ++E+Q  SVG+MCP CKAKISGQ+N+
Sbjct: 795  LTTVCVWCGAEFSHEAFDTEMQSGSVGYMCPDCKAKISGQLNI 837


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