BLASTX nr result

ID: Glycyrrhiza23_contig00028846 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00028846
         (506 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274643.2| PREDICTED: methyl-CpG-binding domain-contain...   164   9e-39
emb|CBI34941.3| unnamed protein product [Vitis vinifera]              163   1e-38
ref|XP_002517349.1| DNA binding protein, putative [Ricinus commu...   145   3e-33
ref|XP_004158345.1| PREDICTED: methyl-CpG-binding domain-contain...   138   4e-31
ref|XP_004141185.1| PREDICTED: methyl-CpG-binding domain-contain...   138   4e-31

>ref|XP_002274643.2| PREDICTED: methyl-CpG-binding domain-containing protein 9-like
           [Vitis vinifera]
          Length = 2164

 Score =  164 bits (414), Expect = 9e-39
 Identities = 94/173 (54%), Positives = 108/173 (62%), Gaps = 7/173 (4%)
 Frame = +1

Query: 7   PAAIPSGGLPH------CAACTKPXXXXXXXXXVLVCDCCERGFHLACTXXXXXXXXXXX 168
           PAA  + GLP       CA C  P         VLVCD CERGFHL C            
Sbjct: 56  PAAGAAAGLPGEGWGSVCAVCGAPEVGAQ----VLVCDGCERGFHLVCVGMPGRQAGM-- 109

Query: 169 XXXLHEWVCGECIAGGAKSKRWPLGVKSKQLLDINASPPSDADGEELHDSRKHALGDKSF 348
              L EWVCGEC+  G  SKRWPLG K ++LLDINASPPS+ +GEEL DSRKH+ GD SF
Sbjct: 110 ---LEEWVCGECVRSGVGSKRWPLGSK-RRLLDINASPPSEGEGEELPDSRKHSPGDNSF 165

Query: 349 GANQFGAPVTSYSNF-YNGSVFGFQRASGVVTHAVRVGFEDILNHNQSITRSF 504
           G N FGAP T YSNF   G+ FGF +ASG++THAV++G EDIL+H     RSF
Sbjct: 166 GGNSFGAPET-YSNFRCAGNGFGFPKASGILTHAVKLGLEDILHHT---NRSF 214


>emb|CBI34941.3| unnamed protein product [Vitis vinifera]
          Length = 1907

 Score =  163 bits (413), Expect = 1e-38
 Identities = 91/165 (55%), Positives = 105/165 (63%), Gaps = 7/165 (4%)
 Frame = +1

Query: 7   PAAIPSGGLPH------CAACTKPXXXXXXXXXVLVCDCCERGFHLACTXXXXXXXXXXX 168
           PAA  + GLP       CA C  P         VLVCD CERGFHL C            
Sbjct: 56  PAAGAAAGLPGEGWGSVCAVCGAPEVGAQ----VLVCDGCERGFHLVCVGMPGRQAGM-- 109

Query: 169 XXXLHEWVCGECIAGGAKSKRWPLGVKSKQLLDINASPPSDADGEELHDSRKHALGDKSF 348
              L EWVCGEC+  G  SKRWPLG K ++LLDINASPPS+ +GEEL DSRKH+ GD SF
Sbjct: 110 ---LEEWVCGECVRSGVGSKRWPLGSK-RRLLDINASPPSEGEGEELPDSRKHSPGDNSF 165

Query: 349 GANQFGAPVTSYSNF-YNGSVFGFQRASGVVTHAVRVGFEDILNH 480
           G N FGAP T YSNF   G+ FGF +ASG++THAV++G EDIL+H
Sbjct: 166 GGNSFGAPET-YSNFRCAGNGFGFPKASGILTHAVKLGLEDILHH 209


>ref|XP_002517349.1| DNA binding protein, putative [Ricinus communis]
           gi|223543360|gb|EEF44891.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 2145

 Score =  145 bits (367), Expect = 3e-33
 Identities = 85/181 (46%), Positives = 102/181 (56%), Gaps = 16/181 (8%)
 Frame = +1

Query: 7   PAAIPSGGLPH------CAACTKPXXXXXXXXXVLVCDCCERGFHLACTXXXXXXXXXXX 168
           PA   + GLP       C AC KP         V+VCD CERGFHL C            
Sbjct: 64  PATGIAAGLPEEEKLLVCGACGKPEAREKDE--VVVCDGCERGFHLLCAGMHGKEEVMKF 121

Query: 169 XXXLHEWVCGECIAGGAKSKRWPLGV--KSKQLLDINASPPSDADG-----EELHDSRKH 327
                +W+CG+C+  G KSKRWPLGV    K +LDINASPPSD DG     EE    RKH
Sbjct: 122 L----DWICGDCVNNGIKSKRWPLGVNKSKKMILDINASPPSDCDGDGDGDEERAYLRKH 177

Query: 328 ALGDKSFGANQFGAPVTSYSNFYNGSVFG---FQRASGVVTHAVRVGFEDILNHNQSITR 498
           ALGD SF  N FGAPV   +  Y G+ FG   F++ASG++  A +VG EDIL+H Q++ R
Sbjct: 178 ALGDNSFSGNTFGAPVAYSNRLYVGNGFGPFDFRKASGLMMKAFKVGVEDILHHAQTVDR 237

Query: 499 S 501
           S
Sbjct: 238 S 238


>ref|XP_004158345.1| PREDICTED: methyl-CpG-binding domain-containing protein 9-like
           [Cucumis sativus]
          Length = 1028

 Score =  138 bits (348), Expect = 4e-31
 Identities = 80/173 (46%), Positives = 94/173 (54%), Gaps = 6/173 (3%)
 Frame = +1

Query: 1   GGPAAIPSGGLPH-CAACTKPXXXXXXXXXVLVCDCCERGFHLACTXXXXXXXXXXXXXX 177
           G PA +P G     C  C +P         V+VCD CERGFHLACT              
Sbjct: 179 GDPAHVPRGVRGSVCGLCGQPEVRGH----VVVCDGCERGFHLACTGMRGGHALN----- 229

Query: 178 LHEWVCGECIAGGAKSKRWPLGVKSKQLLDINASPPSDA-----DGEELHDSRKHALGDK 342
             +WVCGEC   G KSKRWPLGVKSKQLLDINASPPSD      DGEEL   RKH   D 
Sbjct: 230 FEDWVCGECFTTGVKSKRWPLGVKSKQLLDINASPPSDGDAYGEDGEELPGIRKHTAVDN 289

Query: 343 SFGANQFGAPVTSYSNFYNGSVFGFQRASGVVTHAVRVGFEDILNHNQSITRS 501
           S     F +     +  ++G+ +G QRA   V + V++G ED+L  NQ I RS
Sbjct: 290 SLRGTPFCSSAKYRNLLHSGNGYGHQRAPDTVKNKVKMGLEDVLQQNQVIGRS 342


>ref|XP_004141185.1| PREDICTED: methyl-CpG-binding domain-containing protein 9-like
           [Cucumis sativus]
          Length = 2131

 Score =  138 bits (348), Expect = 4e-31
 Identities = 80/173 (46%), Positives = 94/173 (54%), Gaps = 6/173 (3%)
 Frame = +1

Query: 1   GGPAAIPSGGLPH-CAACTKPXXXXXXXXXVLVCDCCERGFHLACTXXXXXXXXXXXXXX 177
           G PA +P G     C  C +P         V+VCD CERGFHLACT              
Sbjct: 68  GDPAHVPRGVRGSVCGLCGQPEVRGH----VVVCDGCERGFHLACTGMRGGHALN----- 118

Query: 178 LHEWVCGECIAGGAKSKRWPLGVKSKQLLDINASPPSDA-----DGEELHDSRKHALGDK 342
             +WVCGEC   G KSKRWPLGVKSKQLLDINASPPSD      DGEEL   RKH   D 
Sbjct: 119 FEDWVCGECFTTGVKSKRWPLGVKSKQLLDINASPPSDGDAYGEDGEELPGIRKHTAVDN 178

Query: 343 SFGANQFGAPVTSYSNFYNGSVFGFQRASGVVTHAVRVGFEDILNHNQSITRS 501
           S     F +     +  ++G+ +G QRA   V + V++G ED+L  NQ I RS
Sbjct: 179 SLRGTPFCSSAKYRNLLHSGNGYGHQRAPDTVKNKVKMGLEDVLQQNQVIGRS 231


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