BLASTX nr result

ID: Glycyrrhiza23_contig00028843 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00028843
         (934 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003524789.1| PREDICTED: LOW QUALITY PROTEIN: probable cal...   207   4e-51
ref|XP_003531079.1| PREDICTED: probable calcium-activated outwar...   206   5e-51
ref|XP_004134597.1| PREDICTED: two-pore potassium channel 3-like...   182   1e-43
ref|XP_002519734.1| Calcium-activated outward-rectifying potassi...   181   2e-43
ref|XP_002317301.1| outward rectifying potassium channel [Populu...   181   3e-43

>ref|XP_003524789.1| PREDICTED: LOW QUALITY PROTEIN: probable calcium-activated
           outward-rectifying potassium channel 6-like [Glycine
           max]
          Length = 426

 Score =  207 bits (526), Expect = 4e-51
 Identities = 117/185 (63%), Positives = 126/185 (68%), Gaps = 8/185 (4%)
 Frame = -1

Query: 532 LCSLPEHDEIVLPITPSEFKDRLIFXXXXXXXXXXXP--LAEALIKXXXXXXXXXXXSFD 359
           LC LPEHDEIVLP+TPSEFKDRLIF           P  LA+AL             S D
Sbjct: 18  LCPLPEHDEIVLPMTPSEFKDRLIFGPSPSSASPRDPSPLADALTLSHNSPKCSSSNSQD 77

Query: 358 AXXXXXXXXQN-----SSWLVDPNYQ-WRKTNLHRSKTAPAMAVISDFNHHPTVAKPQFG 197
                    Q      +SWL+DPNY+ WRKTNLHRSKTAPAMAVISDFN H TV +P+F 
Sbjct: 78  YASSPLFDSQQKQQQLNSWLLDPNYESWRKTNLHRSKTAPAMAVISDFNPHSTVQRPKFA 137

Query: 196 SQSIVHQAFIXXXXXXXLGVVIYWFNRHDFSATETHPIVDALYFCIVTMCTIGYGDITPT 17
           SQSIV Q  I       LGVVIYWFNRH+F+ATETHPIVDALYFCIVTMCTIGYGDITP 
Sbjct: 138 SQSIVCQGVILLALYLALGVVIYWFNRHNFTATETHPIVDALYFCIVTMCTIGYGDITPN 197

Query: 16  STATK 2
           STATK
Sbjct: 198 STATK 202


>ref|XP_003531079.1| PREDICTED: probable calcium-activated outward-rectifying potassium
           channel 6-like [Glycine max]
          Length = 430

 Score =  206 bits (525), Expect = 5e-51
 Identities = 115/189 (60%), Positives = 125/189 (66%), Gaps = 12/189 (6%)
 Frame = -1

Query: 532 LCSLPEHDEIVLPITPSEFKDRLIFXXXXXXXXXXXP--LAEALI---------KXXXXX 386
           LC LPEHDEIVLP+TPSEFKDRLIF           P  LA+AL                
Sbjct: 22  LCPLPEHDEIVLPMTPSEFKDRLIFGPSPSSASPRDPSPLADALTLSYNSPKCPSSSNSQ 81

Query: 385 XXXXXXSFDAXXXXXXXXQNSSWLVDPNYQ-WRKTNLHRSKTAPAMAVISDFNHHPTVAK 209
                  FD+          +SWL+DPNY+ WRKTNLHRSKTAPAMAVISDFN H  V +
Sbjct: 82  DYASPPLFDSQQQQPL----NSWLLDPNYESWRKTNLHRSKTAPAMAVISDFNPHTAVQR 137

Query: 208 PQFGSQSIVHQAFIXXXXXXXLGVVIYWFNRHDFSATETHPIVDALYFCIVTMCTIGYGD 29
           PQF SQSIV Q  I       LGVVIYWFNRH+F+ATETHP+VDALYFCIVTMCTIGYGD
Sbjct: 138 PQFASQSIVRQGVILLALYLALGVVIYWFNRHNFTATETHPVVDALYFCIVTMCTIGYGD 197

Query: 28  ITPTSTATK 2
           ITP STATK
Sbjct: 198 ITPNSTATK 206


>ref|XP_004134597.1| PREDICTED: two-pore potassium channel 3-like [Cucumis sativus]
           gi|449505938|ref|XP_004162609.1| PREDICTED: two-pore
           potassium channel 3-like [Cucumis sativus]
          Length = 425

 Score =  182 bits (461), Expect = 1e-43
 Identities = 102/202 (50%), Positives = 116/202 (57%), Gaps = 3/202 (1%)
 Frame = -1

Query: 598 MEKEXXXXXXXXXXXXXXXPTNLCSLPEHDEIVLPITPSEFKDRLIFXXXXXXXXXXXPL 419
           MEKE               P  LC LPE+DEI LP+TP+EFKDRLIF             
Sbjct: 1   MEKEPLLPYLSPRGKPSPIPPQLCPLPENDEITLPMTPTEFKDRLIFGPSSSPQDASPIF 60

Query: 418 AEALIKXXXXXXXXXXXSFDAXXXXXXXXQNSS---WLVDPNYQWRKTNLHRSKTAPAMA 248
               +              D         Q+ S   WLVD NY W K+NLHRS+TAPAMA
Sbjct: 61  DALTLSLSSSRPSASSSLQDPSTPLDPRSQSQSQQAWLVDSNYTWPKSNLHRSRTAPAMA 120

Query: 247 VISDFNHHPTVAKPQFGSQSIVHQAFIXXXXXXXLGVVIYWFNRHDFSATETHPIVDALY 68
           VI+D NH     KPQFG QSI+ QA +       LGV+IYW NR +FSA ETHP+VDALY
Sbjct: 121 VINDVNHSQE-PKPQFGKQSIIRQAVVLLIVYLSLGVLIYWLNRDNFSAQETHPVVDALY 179

Query: 67  FCIVTMCTIGYGDITPTSTATK 2
           FCIVTMCTIGYGDITP ST+TK
Sbjct: 180 FCIVTMCTIGYGDITPNSTSTK 201


>ref|XP_002519734.1| Calcium-activated outward-rectifying potassium channel, putative
           [Ricinus communis] gi|223541151|gb|EEF42707.1|
           Calcium-activated outward-rectifying potassium channel,
           putative [Ricinus communis]
          Length = 426

 Score =  181 bits (460), Expect = 2e-43
 Identities = 96/179 (53%), Positives = 108/179 (60%), Gaps = 2/179 (1%)
 Frame = -1

Query: 532 LCSLPEHDEIVLP--ITPSEFKDRLIFXXXXXXXXXXXPLAEALIKXXXXXXXXXXXSFD 359
           LC LPE DE+ LP  I+PSE K+RLIF                               F+
Sbjct: 24  LCPLPEDDEVSLPLSISPSELKERLIFGPSPSPNDSTPVFEALTHSLNSPRPSCSNQEFN 83

Query: 358 AXXXXXXXXQNSSWLVDPNYQWRKTNLHRSKTAPAMAVISDFNHHPTVAKPQFGSQSIVH 179
                    Q  SWL+DPNY W KTNLHRSKTAPAMAVI+D  +   + KPQFGSQSIV 
Sbjct: 84  FHDSPRHHQQPQSWLIDPNYSWTKTNLHRSKTAPAMAVINDSLNSSHIPKPQFGSQSIVR 143

Query: 178 QAFIXXXXXXXLGVVIYWFNRHDFSATETHPIVDALYFCIVTMCTIGYGDITPTSTATK 2
           QAF+        GVVIYW NR +F A ETHP+VDA YFCIVTMCTIGYGDITP ST+TK
Sbjct: 144 QAFVLLILYLSFGVVIYWLNRGNFLANETHPVVDAFYFCIVTMCTIGYGDITPNSTSTK 202


>ref|XP_002317301.1| outward rectifying potassium channel [Populus trichocarpa]
           gi|222860366|gb|EEE97913.1| outward rectifying potassium
           channel [Populus trichocarpa]
          Length = 428

 Score =  181 bits (458), Expect = 3e-43
 Identities = 104/183 (56%), Positives = 114/183 (62%), Gaps = 6/183 (3%)
 Frame = -1

Query: 532 LCSLPEHDEIVLPI--TPSEFKDRLIFXXXXXXXXXXXPLAEALI----KXXXXXXXXXX 371
           LC LPE DEI LP+  TPSE KDRLIF           PL EAL                
Sbjct: 23  LCPLPEDDEISLPLPLTPSELKDRLIFGPSSSSPGDRSPLVEALTFSLNSPRPSSSNQDF 82

Query: 370 XSFDAXXXXXXXXQNSSWLVDPNYQWRKTNLHRSKTAPAMAVISDFNHHPTVAKPQFGSQ 191
            SF           + S+LVDPNY W KTNLHRSKTAPAMAVI+DFN  P +AKP+FGSQ
Sbjct: 83  NSFLDSPELQQHHHHQSYLVDPNYPWTKTNLHRSKTAPAMAVINDFNQ-PVIAKPRFGSQ 141

Query: 190 SIVHQAFIXXXXXXXLGVVIYWFNRHDFSATETHPIVDALYFCIVTMCTIGYGDITPTST 11
           SI+ QAF+       LGV+IY  NR  F   ETHP+ DALYFCIVTMCTIGYGDITP ST
Sbjct: 142 SIIGQAFLLLVLYLSLGVLIYSLNRDKFEGIETHPVADALYFCIVTMCTIGYGDITPNST 201

Query: 10  ATK 2
           ATK
Sbjct: 202 ATK 204


Top