BLASTX nr result

ID: Glycyrrhiza23_contig00028837 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00028837
         (471 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF75791.1|AF271892_1 DEAD box protein P68 [Pisum sativum]         186   2e-45
ref|XP_002326066.1| predicted protein [Populus trichocarpa] gi|2...   165   4e-39
ref|XP_002266157.1| PREDICTED: ATP-dependent RNA helicase DBP2 [...   162   2e-38
ref|XP_002523955.1| dead box ATP-dependent RNA helicase, putativ...   160   1e-37
ref|XP_002319430.1| predicted protein [Populus trichocarpa] gi|2...   156   1e-36

>gb|AAF75791.1|AF271892_1 DEAD box protein P68 [Pisum sativum]
          Length = 622

 Score =  186 bits (472), Expect = 2e-45
 Identities = 96/127 (75%), Positives = 103/127 (81%)
 Frame = -2

Query: 470 TDVASRGLDVTGVSHVINLDLPKTMEDYVHRIGRTGRAGSTGLSTSFYTDRDMFLVANIR 291
           TDVASRGLDVTGVSHVINLDLPKT EDY+HRIGRTGRAGSTG++TSFYTDRDMFLV NIR
Sbjct: 428 TDVASRGLDVTGVSHVINLDLPKTTEDYIHRIGRTGRAGSTGIATSFYTDRDMFLVTNIR 487

Query: 290 KAIADAESGNTVAFATGKVXXXXXXXXXXXXXXANVALSRHFGSGAASINIEDKYKFMIT 111
           KAIADAESGN VAFATGKV              AN+A SRH G GAASINIEDKY+FMI 
Sbjct: 488 KAIADAESGNAVAFATGKVARRKEKEAAAAHKEANIASSRHLGLGAASINIEDKYRFMIA 547

Query: 110 APDIKRE 90
           A + + E
Sbjct: 548 ASNSRGE 554


>ref|XP_002326066.1| predicted protein [Populus trichocarpa] gi|222862941|gb|EEF00448.1|
           predicted protein [Populus trichocarpa]
          Length = 530

 Score =  165 bits (417), Expect = 4e-39
 Identities = 91/129 (70%), Positives = 98/129 (75%)
 Frame = -2

Query: 470 TDVASRGLDVTGVSHVINLDLPKTMEDYVHRIGRTGRAGSTGLSTSFYTDRDMFLVANIR 291
           TDVASRGLDVTGV+HVINLDLPKTMEDYVHRIGRTGRAGSTG +TSFYTDRD+FLVA I+
Sbjct: 397 TDVASRGLDVTGVAHVINLDLPKTMEDYVHRIGRTGRAGSTGQATSFYTDRDLFLVAQIK 456

Query: 290 KAIADAESGNTVAFATGKVXXXXXXXXXXXXXXANVALSRHFGSGAASINIEDKYKFMIT 111
           KAIAD ESGNTVAFATGK               A  ALS+  GS    INIEDKY+FMI 
Sbjct: 457 KAIADVESGNTVAFATGKAARRKEREAAASQKEARNALSKVMGS--TCINIEDKYRFMI- 513

Query: 110 APDIKREEG 84
           AP +   EG
Sbjct: 514 APSVITSEG 522


>ref|XP_002266157.1| PREDICTED: ATP-dependent RNA helicase DBP2 [Vitis vinifera]
           gi|297745752|emb|CBI15808.3| unnamed protein product
           [Vitis vinifera]
          Length = 568

 Score =  162 bits (411), Expect = 2e-38
 Identities = 86/127 (67%), Positives = 97/127 (76%)
 Frame = -2

Query: 470 TDVASRGLDVTGVSHVINLDLPKTMEDYVHRIGRTGRAGSTGLSTSFYTDRDMFLVANIR 291
           TDVASRGLDVTGV+HVINLDLPK ME+YVHRIGRTGRAGSTG +TSFYTDRD+FLVA+IR
Sbjct: 433 TDVASRGLDVTGVAHVINLDLPKAMENYVHRIGRTGRAGSTGQATSFYTDRDVFLVAHIR 492

Query: 290 KAIADAESGNTVAFATGKVXXXXXXXXXXXXXXANVALSRHFGSGAASINIEDKYKFMIT 111
           KAIAD  SGNTVAFATGKV              A +ALS     G  S+NIE+KY+FM++
Sbjct: 493 KAIADVGSGNTVAFATGKVARKKEREAAAAQKEARIALSNLSLMGPTSLNIEEKYRFMMS 552

Query: 110 APDIKRE 90
              IK E
Sbjct: 553 PSSIKTE 559


>ref|XP_002523955.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223536802|gb|EEF38442.1| dead box ATP-dependent RNA
           helicase, putative [Ricinus communis]
          Length = 564

 Score =  160 bits (404), Expect = 1e-37
 Identities = 86/127 (67%), Positives = 96/127 (75%)
 Frame = -2

Query: 470 TDVASRGLDVTGVSHVINLDLPKTMEDYVHRIGRTGRAGSTGLSTSFYTDRDMFLVANIR 291
           TDVASRGLDVTGV+HVINLDLPKTMEDYVHR+GRTGRAGS G +TSFYTDRD+FLVA I+
Sbjct: 431 TDVASRGLDVTGVTHVINLDLPKTMEDYVHRVGRTGRAGSAGQATSFYTDRDLFLVAQIK 490

Query: 290 KAIADAESGNTVAFATGKVXXXXXXXXXXXXXXANVALSRHFGSGAASINIEDKYKFMIT 111
           KAIAD +SGNTVAFATGKV              A   LS+    G  SINIEDKY+FMI 
Sbjct: 491 KAIADVKSGNTVAFATGKVARRKEREAAASQKEARNDLSKLL--GPTSINIEDKYRFMIA 548

Query: 110 APDIKRE 90
           + + K E
Sbjct: 549 SSNTKGE 555


>ref|XP_002319430.1| predicted protein [Populus trichocarpa] gi|222857806|gb|EEE95353.1|
           predicted protein [Populus trichocarpa]
          Length = 559

 Score =  156 bits (395), Expect = 1e-36
 Identities = 86/129 (66%), Positives = 95/129 (73%)
 Frame = -2

Query: 470 TDVASRGLDVTGVSHVINLDLPKTMEDYVHRIGRTGRAGSTGLSTSFYTDRDMFLVANIR 291
           TDVASRGLDVTGV+HVINLDLPKTMEDYVHRIGRTGRAGSTG +TSFYTD+D+FLVA I+
Sbjct: 425 TDVASRGLDVTGVAHVINLDLPKTMEDYVHRIGRTGRAGSTGQATSFYTDQDLFLVAQIK 484

Query: 290 KAIADAESGNTVAFATGKVXXXXXXXXXXXXXXANVALSRHFGSGAASINIEDKYKFMIT 111
           KAIAD ESGNTVAFATGK                         +G A INIEDKY+FM+ 
Sbjct: 485 KAIADVESGNTVAFATGKT-ARRKEREAAAALHKEARNDPSKVTGPACINIEDKYRFMM- 542

Query: 110 APDIKREEG 84
           AP I + EG
Sbjct: 543 APSIIKSEG 551


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