BLASTX nr result

ID: Glycyrrhiza23_contig00028827 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00028827
         (385 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003550865.1| PREDICTED: ribonuclease J-like [Glycine max]       96   3e-18
ref|XP_002318122.1| predicted protein [Populus trichocarpa] gi|2...    89   5e-16
ref|XP_003522430.1| PREDICTED: ribonuclease J-like [Glycine max]       88   6e-16
ref|XP_003526967.1| PREDICTED: ribonuclease J-like [Glycine max]       84   1e-14
ref|XP_003602090.1| Ribonuclease J [Medicago truncatula] gi|3554...    82   5e-14

>ref|XP_003550865.1| PREDICTED: ribonuclease J-like [Glycine max]
          Length = 886

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 45/75 (60%), Positives = 54/75 (72%)
 Frame = -1

Query: 382  ELNGKFQGLNGRMVLWEEISKNLLDNGISRSPGQCKSMWTSLIQXXXXXXXXXXXXXRWL 203
            ELN +FQ + GRM LWEEIS+NLL NGISRSPGQCKS+WTSL+Q             +W 
Sbjct: 809  ELNDRFQVVKGRMALWEEISQNLLANGISRSPGQCKSLWTSLLQKYEEVKNEKKNKKKWP 868

Query: 202  YLEDMERVLSDNEAL 158
            Y EDMER+L+DN+ L
Sbjct: 869  YFEDMERILADNKTL 883


>ref|XP_002318122.1| predicted protein [Populus trichocarpa] gi|222858795|gb|EEE96342.1|
            predicted protein [Populus trichocarpa]
          Length = 890

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 40/76 (52%), Positives = 52/76 (68%)
 Frame = -1

Query: 382  ELNGKFQGLNGRMVLWEEISKNLLDNGISRSPGQCKSMWTSLIQXXXXXXXXXXXXXRWL 203
            EL+ +FQ + GRM LWEEIS NL+ +GI+RSPGQCKS+WTSL+Q              W 
Sbjct: 813  ELHSRFQVVRGRMALWEEISTNLMADGINRSPGQCKSLWTSLVQKYEESKNGKKGKKAWP 872

Query: 202  YLEDMERVLSDNEALA 155
            Y EDM+ +LSD+E +A
Sbjct: 873  YFEDMDNILSDSETMA 888


>ref|XP_003522430.1| PREDICTED: ribonuclease J-like [Glycine max]
          Length = 888

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 42/76 (55%), Positives = 52/76 (68%)
 Frame = -1

Query: 382  ELNGKFQGLNGRMVLWEEISKNLLDNGISRSPGQCKSMWTSLIQXXXXXXXXXXXXXRWL 203
            EL+ +FQ + GRM LWEEIS+ LL +GISRSPGQCKS+WTSL+               W 
Sbjct: 811  ELSDRFQVVKGRMALWEEISQKLLADGISRSPGQCKSLWTSLVVKYEGIKNKNDSKKSWP 870

Query: 202  YLEDMERVLSDNEALA 155
            Y+EDMER++SD EA A
Sbjct: 871  YIEDMERIMSDKEAPA 886


>ref|XP_003526967.1| PREDICTED: ribonuclease J-like [Glycine max]
          Length = 874

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 42/77 (54%), Positives = 52/77 (67%)
 Frame = -1

Query: 382  ELNGKFQGLNGRMVLWEEISKNLLDNGISRSPGQCKSMWTSLIQXXXXXXXXXXXXXRWL 203
            EL+ +FQ + GRM LWEEIS+ LL +GI RSPGQCKS+WTSL+               W 
Sbjct: 799  ELSERFQVVKGRMALWEEISQKLLADGICRSPGQCKSLWTSLV-VKYEGIKNEDRKKSWP 857

Query: 202  YLEDMERVLSDNEALAK 152
            Y+EDMER++SD EA AK
Sbjct: 858  YIEDMERIMSDKEAPAK 874


>ref|XP_003602090.1| Ribonuclease J [Medicago truncatula] gi|355491138|gb|AES72341.1|
            Ribonuclease J [Medicago truncatula]
          Length = 959

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 39/73 (53%), Positives = 49/73 (67%)
 Frame = -1

Query: 382  ELNGKFQGLNGRMVLWEEISKNLLDNGISRSPGQCKSMWTSLIQXXXXXXXXXXXXXRWL 203
            +L  +F+ + GRM LWEEIS++LL +GISRSPGQCKS+WTSL                W 
Sbjct: 801  DLRDRFKVVKGRMALWEEISQSLLADGISRSPGQCKSLWTSLALKYEEIKNGKDSRKNWQ 860

Query: 202  YLEDMERVLSDNE 164
            YLEDMER+LS +E
Sbjct: 861  YLEDMERILSSDE 873


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