BLASTX nr result

ID: Glycyrrhiza23_contig00028810 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00028810
         (601 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273025.2| PREDICTED: LOW QUALITY PROTEIN: putative ATP...   199   2e-49
emb|CBI15349.3| unnamed protein product [Vitis vinifera]              199   2e-49
ref|XP_002514608.1| dead box ATP-dependent RNA helicase, putativ...   198   5e-49
ref|XP_004138330.1| PREDICTED: LOW QUALITY PROTEIN: putative ATP...   192   4e-47
ref|XP_002873340.1| predicted protein [Arabidopsis lyrata subsp....   169   3e-40

>ref|XP_002273025.2| PREDICTED: LOW QUALITY PROTEIN: putative ATP-dependent helicase
           HRQ1-like [Vitis vinifera]
          Length = 1231

 Score =  199 bits (507), Expect = 2e-49
 Identities = 111/200 (55%), Positives = 145/200 (72%), Gaps = 1/200 (0%)
 Frame = +3

Query: 3   RKWLYVSKIVSTLKRRDRSFRKNLGWAFEQLPFEIGDGMNVGISLEELFEAVKDHVFVGK 182
           +K + +SKIVS +K+ +  F+ +L  A + L  + G+ M +  SLE+L  +VK+    G 
Sbjct: 346 QKQVPISKIVSVMKKLESCFKTHLWRAVKVLMRKNGNEMAMLFSLEDLLISVKE----GG 401

Query: 183 ENKSKRVKRS-STTPRPDMDHIGCHDTQSLMAVDMVEHLKKGIGYEGQIVHIEDICARKA 359
             K+K+ +RS S     +     CHDT  L+ ++MVEHL+KG+G +GQ+VH+E+ICAR A
Sbjct: 402 AGKAKQARRSWSAVSSTNSAQSKCHDTNPLLPMEMVEHLRKGMGCQGQMVHVEEICARMA 461

Query: 360 IYSEIPIELSEKMRSALKCIGVSELYSHQAESIQASLHGKNVVVATMTSSGKSLCYNLPV 539
           I  EIP ELSE  +SAL+ IGV+ LYSHQAESIQASL GKNVVVATMTSSGKSLCYN+PV
Sbjct: 462 IRVEIPDELSENTKSALEHIGVTRLYSHQAESIQASLGGKNVVVATMTSSGKSLCYNVPV 521

Query: 540 LEVLFKNSSSCALYIFPTKA 599
           LEVL +N  SCALY+FPTKA
Sbjct: 522 LEVLSQNLLSCALYLFPTKA 541


>emb|CBI15349.3| unnamed protein product [Vitis vinifera]
          Length = 1188

 Score =  199 bits (507), Expect = 2e-49
 Identities = 111/200 (55%), Positives = 145/200 (72%), Gaps = 1/200 (0%)
 Frame = +3

Query: 3   RKWLYVSKIVSTLKRRDRSFRKNLGWAFEQLPFEIGDGMNVGISLEELFEAVKDHVFVGK 182
           +K + +SKIVS +K+ +  F+ +L  A + L  + G+ M +  SLE+L  +VK+    G 
Sbjct: 286 QKQVPISKIVSVMKKLESCFKTHLWRAVKVLMRKNGNEMAMLFSLEDLLISVKE----GG 341

Query: 183 ENKSKRVKRS-STTPRPDMDHIGCHDTQSLMAVDMVEHLKKGIGYEGQIVHIEDICARKA 359
             K+K+ +RS S     +     CHDT  L+ ++MVEHL+KG+G +GQ+VH+E+ICAR A
Sbjct: 342 AGKAKQARRSWSAVSSTNSAQSKCHDTNPLLPMEMVEHLRKGMGCQGQMVHVEEICARMA 401

Query: 360 IYSEIPIELSEKMRSALKCIGVSELYSHQAESIQASLHGKNVVVATMTSSGKSLCYNLPV 539
           I  EIP ELSE  +SAL+ IGV+ LYSHQAESIQASL GKNVVVATMTSSGKSLCYN+PV
Sbjct: 402 IRVEIPDELSENTKSALEHIGVTRLYSHQAESIQASLGGKNVVVATMTSSGKSLCYNVPV 461

Query: 540 LEVLFKNSSSCALYIFPTKA 599
           LEVL +N  SCALY+FPTKA
Sbjct: 462 LEVLSQNLLSCALYLFPTKA 481


>ref|XP_002514608.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223546212|gb|EEF47714.1| dead box ATP-dependent RNA
           helicase, putative [Ricinus communis]
          Length = 1189

 Score =  198 bits (504), Expect = 5e-49
 Identities = 106/200 (53%), Positives = 145/200 (72%), Gaps = 1/200 (0%)
 Frame = +3

Query: 3   RKWLYVSKIVSTLKRRDRSFRKNLGWAFEQLPFEIGDGMNVGISLEELFEAVKDHVFVGK 182
           +K + +SKI +T+++R+ SF+ +L  A   L  + G+ + +  SLE+L   VK      K
Sbjct: 303 QKAMSLSKIFTTMRKRESSFKSHLWEAARLLMSKSGNAIAMLFSLEDLLNFVKGGGVSEK 362

Query: 183 ENKSKRVK-RSSTTPRPDMDHIGCHDTQSLMAVDMVEHLKKGIGYEGQIVHIEDICARKA 359
            N++KR   R S+  RP      CH+T  L+ V+MV+HL++G+G  G +VH+EDI ARKA
Sbjct: 363 GNEAKRESGRLSSISRPYSFRTHCHETNHLVPVEMVQHLREGLGSNGHMVHVEDIDARKA 422

Query: 360 IYSEIPIELSEKMRSALKCIGVSELYSHQAESIQASLHGKNVVVATMTSSGKSLCYNLPV 539
           IY+EIP ELS+  + ALKC+G+++LYSHQA+SI ASL  KNVVV+TMTSSGKSLCYN+PV
Sbjct: 423 IYAEIPHELSDNTKLALKCMGITKLYSHQAKSIMASLARKNVVVSTMTSSGKSLCYNVPV 482

Query: 540 LEVLFKNSSSCALYIFPTKA 599
           LEVL +N SSCALY+FPTKA
Sbjct: 483 LEVLSQNLSSCALYLFPTKA 502


>ref|XP_004138330.1| PREDICTED: LOW QUALITY PROTEIN: putative ATP-dependent helicase
           HRQ1-like [Cucumis sativus]
          Length = 1218

 Score =  192 bits (488), Expect = 4e-47
 Identities = 113/197 (57%), Positives = 135/197 (68%), Gaps = 3/197 (1%)
 Frame = +3

Query: 18  VSKIVSTLKRRDRSFRKNLGWAFEQLPFEIGDG--MNVGISLEELFEAVKDHVFVGKENK 191
           VS  V+ LKRR+RSF+  L  A +    + G G  M V  SLE +  + +  V     ++
Sbjct: 347 VSMDVNPLKRRERSFKLYLWEAIKCHMLKHGSGREMCVPFSLEAVITSNETDV---DGSE 403

Query: 192 SKRVKRSSTTPRPDM-DHIGCHDTQSLMAVDMVEHLKKGIGYEGQIVHIEDICARKAIYS 368
           +KR K+S T       D I CHDT  L+  DMVEHL K +G EGQIVHI DI ARKA Y 
Sbjct: 404 TKRAKKSDTASSSSQSDRIRCHDTLKLLPEDMVEHLGKSVGPEGQIVHINDILARKANYV 463

Query: 369 EIPIELSEKMRSALKCIGVSELYSHQAESIQASLHGKNVVVATMTSSGKSLCYNLPVLEV 548
           EIP ELS  + SALKCIGV++LYSHQA SI+ASL GK+V VATMTSSGKSLCYNLPVLE 
Sbjct: 464 EIPKELSNSVVSALKCIGVAKLYSHQARSIEASLAGKHVAVATMTSSGKSLCYNLPVLEA 523

Query: 549 LFKNSSSCALYIFPTKA 599
           + +N SSCALY+FPTKA
Sbjct: 524 MSQNVSSCALYLFPTKA 540


>ref|XP_002873340.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297319177|gb|EFH49599.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 1067

 Score =  169 bits (428), Expect = 3e-40
 Identities = 93/199 (46%), Positives = 129/199 (64%)
 Frame = +3

Query: 3   RKWLYVSKIVSTLKRRDRSFRKNLGWAFEQLPFEIGDGMNVGISLEELFEAVKDHVFVGK 182
           RK   ++K+ S +K+R+ SF+ +   + + L  +      + ISLE + +   +   VG 
Sbjct: 262 RKKTPLAKVFSAMKKRETSFKSDFWDSIKSLLNKNTGESGIAISLEGMLKFASEGRAVGG 321

Query: 183 ENKSKRVKRSSTTPRPDMDHIGCHDTQSLMAVDMVEHLKKGIGYEGQIVHIEDICARKAI 362
               +  K S  T         C +T SL+  +MVEHL+ GIG +GQ+VH+E I ARK+ 
Sbjct: 322 NEARQAGKGSCPTSGSRKSQTLCRETNSLLPSEMVEHLRNGIGSKGQVVHVEVINARKSA 381

Query: 363 YSEIPIELSEKMRSALKCIGVSELYSHQAESIQASLHGKNVVVATMTSSGKSLCYNLPVL 542
           Y E+  +LSE  +SALK IG++ LYSHQAE+I A+L GKNV VATMTSSGKSLCYN+PV 
Sbjct: 382 YVEMSDKLSETTKSALKRIGLNTLYSHQAEAISAALSGKNVSVATMTSSGKSLCYNVPVF 441

Query: 543 EVLFKNSSSCALYIFPTKA 599
           E L K+++SCALY+FPTKA
Sbjct: 442 EELCKDTNSCALYLFPTKA 460


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