BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00028806
         (467 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003628716.1| DNA-directed RNA polymerase [Medicago trunca...   194   5e-48
ref|XP_003531932.1| PREDICTED: DNA-directed RNA polymerase 1B, m...   188   5e-46
ref|XP_003548663.1| PREDICTED: DNA-directed RNA polymerase 1B, m...   182   2e-44
ref|XP_002278535.1| PREDICTED: DNA-directed RNA polymerase 2, ch...   169   3e-40
ref|XP_002267464.1| PREDICTED: DNA-directed RNA polymerase 1, mi...   168   4e-40

>ref|XP_003628716.1| DNA-directed RNA polymerase [Medicago truncatula]
           gi|355522738|gb|AET03192.1| DNA-directed RNA polymerase
           [Medicago truncatula]
          Length = 259

 Score =  194 bits (494), Expect = 5e-48
 Identities = 104/156 (66%), Positives = 115/156 (73%), Gaps = 1/156 (0%)
 Frame = -2

Query: 466 EAIESTDTEDDYSGSDEV-QKLLEAMVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXML 290
           EAIESTDTEDD SGS+EV QKLL+ MV                                L
Sbjct: 87  EAIESTDTEDDCSGSEEVVQKLLDQMVIEEEKKNPQLEEKKKNKNNSYKYKM-------L 139

Query: 289 RRRQIKMETEAWEDAAREYQELLDDMREQKLAPNLPYMKSLFLGWFEPLRNAILAEQELC 110
           RRRQIK+ETEAWE+AAREYQELL+DMREQKLAPNLPYMKSLFLGWFEPL+NAI A+QE+C
Sbjct: 140 RRRQIKIETEAWEEAAREYQELLEDMREQKLAPNLPYMKSLFLGWFEPLKNAIAADQEIC 199

Query: 109 GQSKNRLTHAPYFNQLPADKMAVITMHKLMGLLMTN 2
             +K RL+HAPYFN+LP D MAVITMHKLMGLLMTN
Sbjct: 200 KDTKTRLSHAPYFNELPPDMMAVITMHKLMGLLMTN 235


>ref|XP_003531932.1| PREDICTED: DNA-directed RNA polymerase 1B, mitochondrial-like
           [Glycine max]
          Length = 949

 Score =  188 bits (477), Expect = 5e-46
 Identities = 101/155 (65%), Positives = 110/155 (70%)
 Frame = -2

Query: 466 EAIESTDTEDDYSGSDEVQKLLEAMVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMLR 287
           EAIESTDTEDDY   DEVQKLL+ M                                 L+
Sbjct: 64  EAIESTDTEDDY---DEVQKLLQQMAKAEHKVDNSSSSSSYKYKL-------------LK 107

Query: 286 RRQIKMETEAWEDAAREYQELLDDMREQKLAPNLPYMKSLFLGWFEPLRNAILAEQELCG 107
           RRQIK ETEAW +AAREY+ELL+DMREQKLAPNLPYMKSLFLGWFEPLRNAILA+QELC 
Sbjct: 108 RRQIKSETEAWAEAAREYEELLEDMREQKLAPNLPYMKSLFLGWFEPLRNAILADQELCK 167

Query: 106 QSKNRLTHAPYFNQLPADKMAVITMHKLMGLLMTN 2
            SK R++HAPYFN LPAD MAV+TMHKLM LLMTN
Sbjct: 168 DSKCRMSHAPYFNDLPADMMAVVTMHKLMALLMTN 202


>ref|XP_003548663.1| PREDICTED: DNA-directed RNA polymerase 1B, mitochondrial-like
           [Glycine max]
          Length = 955

 Score =  182 bits (462), Expect = 2e-44
 Identities = 98/155 (63%), Positives = 109/155 (70%)
 Frame = -2

Query: 466 EAIESTDTEDDYSGSDEVQKLLEAMVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMLR 287
           EAIESTDTEDDY   DEVQKLLE M                                 L+
Sbjct: 76  EAIESTDTEDDY---DEVQKLLEEMAKAEHKVDSSSYKYKL-----------------LK 115

Query: 286 RRQIKMETEAWEDAAREYQELLDDMREQKLAPNLPYMKSLFLGWFEPLRNAILAEQELCG 107
           RRQI+ ETEAW +AAREY ELL+DMR++KLAPNLPYMKSLFLGWFEPLRNAILA+Q+LC 
Sbjct: 116 RRQIESETEAWAEAAREYGELLEDMRDKKLAPNLPYMKSLFLGWFEPLRNAILADQDLCK 175

Query: 106 QSKNRLTHAPYFNQLPADKMAVITMHKLMGLLMTN 2
            SK R++HAPYFN LPAD MAV+TMHKLM LLMTN
Sbjct: 176 DSKCRMSHAPYFNDLPADMMAVVTMHKLMALLMTN 210


>ref|XP_002278535.1| PREDICTED: DNA-directed RNA polymerase 2,
           chloroplastic/mitochondrial [Vitis vinifera]
           gi|298204431|emb|CBI16911.3| unnamed protein product
           [Vitis vinifera]
          Length = 1035

 Score =  169 bits (427), Expect = 3e-40
 Identities = 90/154 (58%), Positives = 105/154 (68%)
 Frame = -2

Query: 466 EAIESTDTEDDYSGSDEVQKLLEAMVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMLR 287
           EA+ STD E+D S SDE+Q+LL  M                                 LR
Sbjct: 143 EAVSSTDVEEDVSASDEIQELLGEM----KKEEKRQVNFKRREKLKMERGMEQGRYLRLR 198

Query: 286 RRQIKMETEAWEDAAREYQELLDDMREQKLAPNLPYMKSLFLGWFEPLRNAILAEQELCG 107
           RRQ+K+ETEAWE AA+EY+ELL DM EQKLAPNLPYMKSLFLGWFEPLR+AI+ EQELC 
Sbjct: 199 RRQVKIETEAWELAAKEYKELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIVKEQELCR 258

Query: 106 QSKNRLTHAPYFNQLPADKMAVITMHKLMGLLMT 5
             KN+  +APYF+QLPAD M+VITMHKL+GLLMT
Sbjct: 259 LGKNKAAYAPYFDQLPADMMSVITMHKLVGLLMT 292


>ref|XP_002267464.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial [Vitis
           vinifera]
          Length = 978

 Score =  168 bits (426), Expect = 4e-40
 Identities = 90/153 (58%), Positives = 105/153 (68%)
 Frame = -2

Query: 463 AIESTDTEDDYSGSDEVQKLLEAMVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMLRR 284
           A E+  +E+D SG DEVQ+L+E +                                +LRR
Sbjct: 96  AAEAIASEEDMSGVDEVQELVEEV----------NKGDKLEKQPKLIGGVAQGKHNVLRR 145

Query: 283 RQIKMETEAWEDAAREYQELLDDMREQKLAPNLPYMKSLFLGWFEPLRNAILAEQELCGQ 104
           RQIKMETEAWE+AA+EY+ELL DM EQKLAPNLPY+KSLFLGWFEPLR+ I AEQ+LC Q
Sbjct: 146 RQIKMETEAWEEAAKEYRELLSDMCEQKLAPNLPYIKSLFLGWFEPLRDVIAAEQDLCKQ 205

Query: 103 SKNRLTHAPYFNQLPADKMAVITMHKLMGLLMT 5
            KNR  +APYF+ LPAD MAVITMHKLMGLLMT
Sbjct: 206 GKNRAAYAPYFDHLPADMMAVITMHKLMGLLMT 238