BLASTX nr result

ID: Glycyrrhiza23_contig00028804 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00028804
         (472 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK48519.1| unknown [Lotus japonicus]                              181   7e-44
ref|XP_003630631.1| Cytidine deaminase [Medicago truncatula] gi|...   167   8e-40
ref|XP_003529084.1| PREDICTED: cytidine deaminase-like [Glycine ...   153   2e-35
ref|XP_003525311.1| PREDICTED: cytidine deaminase-like [Glycine ...   152   2e-35
ref|XP_002282373.1| PREDICTED: cytidine deaminase-like [Vitis vi...   150   1e-34

>gb|AFK48519.1| unknown [Lotus japonicus]
          Length = 294

 Score =  181 bits (458), Expect = 7e-44
 Identities = 97/158 (61%), Positives = 110/158 (69%), Gaps = 1/158 (0%)
 Frame = +1

Query: 1   PEIKVLVTSEPDPKFTPLTLFLPHRFGPNDLLPQKAPLLLEPHXXXXXXXXXXXXXXXXG 180
           PEI++L+TSEPDPKFTPL+ FLPHRF P+DLLP +APLLLE H                G
Sbjct: 114 PEIQILITSEPDPKFTPLSHFLPHRFSPHDLLPPRAPLLLEYHHNGLTLLREN------G 167

Query: 181 VCCNGHHYDGEEKLSVAA-LEATNNSHAPYSDSPSGVALLDSGGHVYRGSYVESAAFNPS 357
            C NGH    + K  +AA LEA N SHAPYSDSPSGVAL+DSGG +YRGSYVESAAFNPS
Sbjct: 168 FCNNGHALREKSKSKLAAALEAANKSHAPYSDSPSGVALVDSGGKLYRGSYVESAAFNPS 227

Query: 358 LGPLQXXXXXXXXXXXXEYGDIVGAVLVEKDGAMVKQE 471
           LGP+Q            EY +IV AVLVEKDG +VKQE
Sbjct: 228 LGPVQAALVAFVAGGGGEYEEIVEAVLVEKDGTVVKQE 265


>ref|XP_003630631.1| Cytidine deaminase [Medicago truncatula]
           gi|355524653|gb|AET05107.1| Cytidine deaminase [Medicago
           truncatula]
          Length = 287

 Score =  167 bits (423), Expect = 8e-40
 Identities = 89/157 (56%), Positives = 107/157 (68%)
 Frame = +1

Query: 1   PEIKVLVTSEPDPKFTPLTLFLPHRFGPNDLLPQKAPLLLEPHXXXXXXXXXXXXXXXXG 180
           P+I++++TSE DP FT L+ FLP+RFGP+DLLPQ APL LEP                 G
Sbjct: 118 PDIQIIITSESDPNFTSLSHFLPYRFGPHDLLPQHAPLFLEPRNNGLTQKLPN------G 171

Query: 181 VCCNGHHYDGEEKLSVAALEATNNSHAPYSDSPSGVALLDSGGHVYRGSYVESAAFNPSL 360
           VC  G   D  EKL +AA+E  N SHAPYS+SPSG+A++D  G +Y+GSYVESAAFNPSL
Sbjct: 172 VC-KGDAVD--EKLKIAAMEGANKSHAPYSNSPSGMAIVDCNGKIYKGSYVESAAFNPSL 228

Query: 361 GPLQXXXXXXXXXXXXEYGDIVGAVLVEKDGAMVKQE 471
           GPLQ            +Y +IVGAVLVEKDGAMVKQE
Sbjct: 229 GPLQAAVVAFMVGGGGKYDEIVGAVLVEKDGAMVKQE 265


>ref|XP_003529084.1| PREDICTED: cytidine deaminase-like [Glycine max]
          Length = 278

 Score =  153 bits (386), Expect = 2e-35
 Identities = 80/157 (50%), Positives = 104/157 (66%)
 Frame = +1

Query: 1   PEIKVLVTSEPDPKFTPLTLFLPHRFGPNDLLPQKAPLLLEPHXXXXXXXXXXXXXXXXG 180
           P+I++L+TS  +P F+PL+ FL H FGP+DLLP+  PLLLEP                  
Sbjct: 111 PDIQILITSHKNPHFSPLSHFLSHHFGPHDLLPKTVPLLLEPRHNALSLP---------- 160

Query: 181 VCCNGHHYDGEEKLSVAALEATNNSHAPYSDSPSGVALLDSGGHVYRGSYVESAAFNPSL 360
                 H++    L++AALEA NNSHAPYS SPSGVALLDS G+V++GSY+ESAA+NPSL
Sbjct: 161 ---QNDHFNA---LAIAALEAANNSHAPYSASPSGVALLDSKGNVFKGSYIESAAYNPSL 214

Query: 361 GPLQXXXXXXXXXXXXEYGDIVGAVLVEKDGAMVKQE 471
           GPLQ            +Y +IV AVLVEK+GA++KQ+
Sbjct: 215 GPLQAAIVAFIAGGGGDYEEIVAAVLVEKEGAVIKQD 251


>ref|XP_003525311.1| PREDICTED: cytidine deaminase-like [Glycine max]
          Length = 293

 Score =  152 bits (385), Expect = 2e-35
 Identities = 85/156 (54%), Positives = 101/156 (64%)
 Frame = +1

Query: 4   EIKVLVTSEPDPKFTPLTLFLPHRFGPNDLLPQKAPLLLEPHXXXXXXXXXXXXXXXXGV 183
           ++K+LVTSE   +F  L+ FLPHRFGP+DLLP +APLLLEPH                  
Sbjct: 121 DVKILVTSEATAEFRALSDFLPHRFGPHDLLPLEAPLLLEPHHYTLTLQHYL-------- 172

Query: 184 CCNGHHYDGEEKLSVAALEATNNSHAPYSDSPSGVALLDSGGHVYRGSYVESAAFNPSLG 363
             N H  +   KL +AALEA N SHAPYS SPSGVALLD  G+V++GSY+ESAAFNPSLG
Sbjct: 173 --NAHVPN--HKLKIAALEAANKSHAPYSGSPSGVALLDCHGNVFKGSYMESAAFNPSLG 228

Query: 364 PLQXXXXXXXXXXXXEYGDIVGAVLVEKDGAMVKQE 471
           P+Q            +Y  IVGA LVE DGA+VKQE
Sbjct: 229 PVQAALVAFVAGGGGDYDRIVGAALVEMDGAVVKQE 264


>ref|XP_002282373.1| PREDICTED: cytidine deaminase-like [Vitis vinifera]
          Length = 301

 Score =  150 bits (379), Expect = 1e-34
 Identities = 83/157 (52%), Positives = 98/157 (62%)
 Frame = +1

Query: 1   PEIKVLVTSEPDPKFTPLTLFLPHRFGPNDLLPQKAPLLLEPHXXXXXXXXXXXXXXXXG 180
           P+IKVL+TS  D +F PL+ FLP+RFGP+DLL +  PLLLEP                  
Sbjct: 118 PDIKVLITSSSDQEFRPLSEFLPNRFGPDDLLDKDTPLLLEPQNNGLSLVNAIGSQLV-N 176

Query: 181 VCCNGHHYDGEEKLSVAALEATNNSHAPYSDSPSGVALLDSGGHVYRGSYVESAAFNPSL 360
             CNG     ++ L   ALEA N SHAPYS  PSGVAL+DS G VYRGSY+ESAA+NPSL
Sbjct: 177 TGCNGVCACDQDSLKYEALEAANKSHAPYSGCPSGVALIDSEGRVYRGSYMESAAYNPSL 236

Query: 361 GPLQXXXXXXXXXXXXEYGDIVGAVLVEKDGAMVKQE 471
           GP+Q             Y +IVGAVLVEK+ A VKQE
Sbjct: 237 GPVQAALVAYIAGGGDGYEEIVGAVLVEKEEAQVKQE 273


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