BLASTX nr result

ID: Glycyrrhiza23_contig00028801 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00028801
         (820 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303834.1| predicted protein [Populus trichocarpa] gi|2...   149   1e-33
ref|XP_002527324.1| conserved hypothetical protein [Ricinus comm...   112   1e-22
ref|XP_002512606.1| conserved hypothetical protein [Ricinus comm...    90   7e-16
emb|CAN84088.1| hypothetical protein VITISV_023632 [Vitis vinifera]    89   1e-15
dbj|BAD54583.1| hypothetical protein [Oryza sativa Japonica Grou...    88   3e-15

>ref|XP_002303834.1| predicted protein [Populus trichocarpa] gi|222841266|gb|EEE78813.1|
           predicted protein [Populus trichocarpa]
          Length = 210

 Score =  149 bits (375), Expect = 1e-33
 Identities = 73/129 (56%), Positives = 93/129 (72%)
 Frame = -1

Query: 580 SWICTNNSKTMLLRIVHPGGHVELHERPVTAAEIMCRNPRCCVTYPYVFQQPWAVVAPDT 401
           S ICTN++K ML++IVHPGGHVELH+RPV A E+M RNPRC V YP+VF+QPWA+VAPDT
Sbjct: 5   SCICTNSTKNMLVKIVHPGGHVELHDRPVLAEEVMLRNPRCIVAYPHVFRQPWAIVAPDT 64

Query: 400 VLMLGQKFYVVPISTVRKLQNLSPRNSPSPAREITVSSFLAETRNAQSGKEEEDDGMISA 221
           +L+LGQKFYVVPI+T+RKLQ  S   S SP  ++  S    +T N     +E    + S+
Sbjct: 65  MLLLGQKFYVVPINTIRKLQRRSITRSQSPINDVRAS----KTPN----NDERGSDISSS 116

Query: 220 CCIFRKKNI 194
           C  F  KN+
Sbjct: 117 CWYFINKNM 125


>ref|XP_002527324.1| conserved hypothetical protein [Ricinus communis]
           gi|223533324|gb|EEF35076.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 157

 Score =  112 bits (280), Expect = 1e-22
 Identities = 57/107 (53%), Positives = 73/107 (68%), Gaps = 3/107 (2%)
 Frame = -1

Query: 523 GHVELHERPVTAAEIMCRNPRCCVTYPYVFQQPWAVVAPDTVLMLGQKFYVVPISTVRKL 344
           GH ELH+RPV A+EI+ RNP+C V YP VFQQPWA+VAPDT+LMLGQKFYV+PIST+RKL
Sbjct: 4   GHKELHDRPVVASEIIRRNPKCVVAYPNVFQQPWAIVAPDTILMLGQKFYVLPISTIRKL 63

Query: 343 QNLSPRNSPSPAREITVSSFLAETRN---AQSGKEEEDDGMISACCI 212
           Q  S ++S S    I      +ET++    +   E +D G    C +
Sbjct: 64  QRHSLKHSSSHNNPI------SETKSESPQEDNNEPKDSGRKEGCFV 104


>ref|XP_002512606.1| conserved hypothetical protein [Ricinus communis]
           gi|223548567|gb|EEF50058.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 261

 Score = 89.7 bits (221), Expect = 7e-16
 Identities = 37/74 (50%), Positives = 54/74 (72%)
 Frame = -1

Query: 565 NNSKTMLLRIVHPGGHVELHERPVTAAEIMCRNPRCCVTYPYVFQQPWAVVAPDTVLMLG 386
           N+    +L++VHPGG +E+H++P+TA E+M +NPR CVT P VF+ PW VV P++VL  G
Sbjct: 6   NSKNYRVLKLVHPGGFIEIHQKPITAYEVMKKNPRHCVTRPDVFRYPWVVVRPESVLKPG 65

Query: 385 QKFYVVPISTVRKL 344
             FY+VP  T++ L
Sbjct: 66  SVFYIVPFHTIQSL 79


>emb|CAN84088.1| hypothetical protein VITISV_023632 [Vitis vinifera]
          Length = 89

 Score = 89.0 bits (219), Expect = 1e-15
 Identities = 37/71 (52%), Positives = 54/71 (76%)
 Frame = -1

Query: 547 LLRIVHPGGHVELHERPVTAAEIMCRNPRCCVTYPYVFQQPWAVVAPDTVLMLGQKFYVV 368
           +L++VHPGG VE+H+ P+TAA +M +NPR C+T+P VF+ PW VV P+ VL  G+ F++V
Sbjct: 13  VLKLVHPGGFVEVHKNPITAAAVMEKNPRHCITWPDVFRYPWIVVRPEAVLKPGRVFFIV 72

Query: 367 PISTVRKLQNL 335
           P  T+ +L NL
Sbjct: 73  PFRTIHRLCNL 83


>dbj|BAD54583.1| hypothetical protein [Oryza sativa Japonica Group]
           gi|53793339|dbj|BAD54560.1| hypothetical protein [Oryza
           sativa Japonica Group]
          Length = 328

 Score = 87.8 bits (216), Expect = 3e-15
 Identities = 48/96 (50%), Positives = 64/96 (66%), Gaps = 6/96 (6%)
 Frame = -1

Query: 580 SWI-CTNNSKTM--LLRIVHPGGHVELHERPVTAAEIMCRNPRCCVTYPYVFQQP---WA 419
           SW+ C+  +      +++V PGGHVEL +R V A+E+M R+PR CV  P VF+ P    A
Sbjct: 3   SWLFCSGKAAARGEFVKLVFPGGHVELLDRAVPASEVMARHPRFCVARPDVFRDPAAAGA 62

Query: 418 VVAPDTVLMLGQKFYVVPISTVRKLQNLSPRNSPSP 311
           V APD VL LG+K+YVVP STVR+LQ +   +S SP
Sbjct: 63  VAAPDAVLALGRKYYVVPRSTVRRLQIMHASSSSSP 98


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