BLASTX nr result

ID: Glycyrrhiza23_contig00028795 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00028795
         (324 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001239785.1| uncharacterized protein LOC100805406 [Glycin...   164   5e-39
ref|XP_003539644.1| PREDICTED: E3 ubiquitin-protein ligase SDIR1...   162   2e-38
gb|AFK35739.1| unknown [Lotus japonicus]                              156   1e-36
ref|XP_003606704.1| E3 ubiquitin-protein ligase [Medicago trunca...   147   1e-33
ref|XP_002283232.2| PREDICTED: E3 ubiquitin-protein ligase SDIR1...   143   1e-32

>ref|NP_001239785.1| uncharacterized protein LOC100805406 [Glycine max]
           gi|255645197|gb|ACU23096.1| unknown [Glycine max]
          Length = 274

 Score =  164 bits (416), Expect = 5e-39
 Identities = 81/107 (75%), Positives = 83/107 (77%)
 Frame = -2

Query: 323 EEEINALPIHTHKVPGPTKDXXXXXXXXXXGTIEIKQDSGGTEGSVKGLEDELTCTICLD 144
           EEEINALPIHT+KVP P KD             EIKQ SGGTE   KG EDELTCTICLD
Sbjct: 159 EEEINALPIHTYKVPVPPKDGSAGLASSSGAA-EIKQASGGTEAGAKGSEDELTCTICLD 217

Query: 143 QVKRGELVRSLPCLHQFHANCIDPWLRQQGTCPVCKFRMGSGRQGNR 3
           QVKRGELVRSLPCLHQFHANCIDPWLRQQGTCPVCK R+GS   GNR
Sbjct: 218 QVKRGELVRSLPCLHQFHANCIDPWLRQQGTCPVCKLRIGSVSGGNR 264


>ref|XP_003539644.1| PREDICTED: E3 ubiquitin-protein ligase SDIR1-like [Glycine max]
          Length = 274

 Score =  162 bits (411), Expect = 2e-38
 Identities = 79/107 (73%), Positives = 83/107 (77%)
 Frame = -2

Query: 323 EEEINALPIHTHKVPGPTKDXXXXXXXXXXGTIEIKQDSGGTEGSVKGLEDELTCTICLD 144
           EEEINALPIHT+KVP P KD             E+KQ+SGGTE    G EDELTCTICLD
Sbjct: 159 EEEINALPIHTYKVPVPPKDGSAGLASSSDAA-EVKQESGGTEAGTGGPEDELTCTICLD 217

Query: 143 QVKRGELVRSLPCLHQFHANCIDPWLRQQGTCPVCKFRMGSGRQGNR 3
           QVKRGELVRSLPCLHQFHANCIDPWLRQQGTCPVCK R+GS   GNR
Sbjct: 218 QVKRGELVRSLPCLHQFHANCIDPWLRQQGTCPVCKLRIGSVSGGNR 264


>gb|AFK35739.1| unknown [Lotus japonicus]
          Length = 249

 Score =  156 bits (395), Expect = 1e-36
 Identities = 76/106 (71%), Positives = 82/106 (77%)
 Frame = -2

Query: 323 EEEINALPIHTHKVPGPTKDXXXXXXXXXXGTIEIKQDSGGTEGSVKGLEDELTCTICLD 144
           EEEIN+LP+HT+KV  PTKD             EIKQDS G EGS+K   DELTCTICL+
Sbjct: 134 EEEINSLPVHTYKVAVPTKDGTAGLASSSGAA-EIKQDSEGAEGSIKVSVDELTCTICLE 192

Query: 143 QVKRGELVRSLPCLHQFHANCIDPWLRQQGTCPVCKFRMGSGRQGN 6
            VKRGELVR+LPCLHQFHANCID WLRQQGTCPVCKFRMG G QGN
Sbjct: 193 HVKRGELVRNLPCLHQFHANCIDQWLRQQGTCPVCKFRMGLGWQGN 238


>ref|XP_003606704.1| E3 ubiquitin-protein ligase [Medicago truncatula]
           gi|355507759|gb|AES88901.1| E3 ubiquitin-protein ligase
           [Medicago truncatula]
          Length = 271

 Score =  147 bits (370), Expect = 1e-33
 Identities = 70/106 (66%), Positives = 76/106 (71%)
 Frame = -2

Query: 323 EEEINALPIHTHKVPGPTKDXXXXXXXXXXGTIEIKQDSGGTEGSVKGLEDELTCTICLD 144
           EEEINALPIH HKV GP KD             EIKQD  G EGS    ED LTC ICLD
Sbjct: 155 EEEINALPIHKHKVTGPIKDGSTGSTSSSSEAAEIKQDCKGEEGSANDQEDGLTCAICLD 214

Query: 143 QVKRGELVRSLPCLHQFHANCIDPWLRQQGTCPVCKFRMGSGRQGN 6
           QV+RGELVRSLPCLHQFHA+CID WLR++ TCPVCKF+MG+G   N
Sbjct: 215 QVQRGELVRSLPCLHQFHASCIDQWLRRKRTCPVCKFKMGAGWLSN 260


>ref|XP_002283232.2| PREDICTED: E3 ubiquitin-protein ligase SDIR1 [Vitis vinifera]
           gi|297746043|emb|CBI16099.3| unnamed protein product
           [Vitis vinifera]
          Length = 279

 Score =  143 bits (361), Expect = 1e-32
 Identities = 69/112 (61%), Positives = 81/112 (72%), Gaps = 5/112 (4%)
 Frame = -2

Query: 323 EEEINALPIHTHKVPGPTKDXXXXXXXXXXGTI-----EIKQDSGGTEGSVKGLEDELTC 159
           EEEINALP+H +KV GP  +                  + +QDS   + S+KG EDELTC
Sbjct: 158 EEEINALPVHKYKVTGPQSEGSSMQQAASSSASAEFDEKARQDSRKGDSSMKGSEDELTC 217

Query: 158 TICLDQVKRGELVRSLPCLHQFHANCIDPWLRQQGTCPVCKFRMGSGRQGNR 3
           +ICL+QV RGELVRSLPCLHQFHANCIDPWLRQQGTCPVCKFR+G+G Q +R
Sbjct: 218 SICLEQVNRGELVRSLPCLHQFHANCIDPWLRQQGTCPVCKFRVGAGWQESR 269


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