BLASTX nr result

ID: Glycyrrhiza23_contig00028791 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00028791
         (656 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004171095.1| PREDICTED: DNA repair protein RAD50-like, pa...   379   e-103
ref|XP_003552170.1| PREDICTED: DNA repair protein RAD50-like [Gl...   379   e-103
ref|XP_002522807.1| DNA repair protein RAD50, putative [Ricinus ...   379   e-103
ref|XP_004133980.1| PREDICTED: DNA repair protein RAD50-like [Cu...   377   e-103
ref|XP_002266665.2| PREDICTED: LOW QUALITY PROTEIN: DNA repair p...   375   e-102

>ref|XP_004171095.1| PREDICTED: DNA repair protein RAD50-like, partial [Cucumis sativus]
          Length = 299

 Score =  379 bits (973), Expect = e-103
 Identities = 186/188 (98%), Positives = 188/188 (100%)
 Frame = +2

Query: 92  MSTVDKMLIKGIRSFDPENKNVITFFKPLTLIVGPNGAGKTTIIECLKLSCTGELPPNAR 271
           MSTVDKMLIKGIRSFDPEN+NVITFFKPLTLIVGPNGAGKTTIIECLKLSCTGELPPNAR
Sbjct: 1   MSTVDKMLIKGIRSFDPENRNVITFFKPLTLIVGPNGAGKTTIIECLKLSCTGELPPNAR 60

Query: 272 SGHSFIHDPKVAGETETKGQIKLRFKTAAGKDVVCIRSFQLTQKASKMEYKAIESVLQTI 451
           SGHSFIHDPKVAGETETKGQIKLRFKTAAGKDVVCIRSFQLTQKASKMEYKAIESVLQTI
Sbjct: 61  SGHSFIHDPKVAGETETKGQIKLRFKTAAGKDVVCIRSFQLTQKASKMEYKAIESVLQTI 120

Query: 452 NPHTGEKVCLSYRCADMDREIPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDI 631
           NPHTGEKVCLSYRCADMDREIPALMGVSKA+LENVIFVHQDEANWPLQDPSTLKKKFDDI
Sbjct: 121 NPHTGEKVCLSYRCADMDREIPALMGVSKAVLENVIFVHQDEANWPLQDPSTLKKKFDDI 180

Query: 632 FSATRYTK 655
           FSATRYTK
Sbjct: 181 FSATRYTK 188


>ref|XP_003552170.1| PREDICTED: DNA repair protein RAD50-like [Glycine max]
          Length = 1316

 Score =  379 bits (973), Expect = e-103
 Identities = 186/188 (98%), Positives = 188/188 (100%)
 Frame = +2

Query: 92  MSTVDKMLIKGIRSFDPENKNVITFFKPLTLIVGPNGAGKTTIIECLKLSCTGELPPNAR 271
           MSTVDKMLIKGIRSFDPENKNVITFFKPLTLIVGPNGAGKTTIIECLKLSCTGELPPNAR
Sbjct: 1   MSTVDKMLIKGIRSFDPENKNVITFFKPLTLIVGPNGAGKTTIIECLKLSCTGELPPNAR 60

Query: 272 SGHSFIHDPKVAGETETKGQIKLRFKTAAGKDVVCIRSFQLTQKASKMEYKAIESVLQTI 451
           SGHSFIHDPKVAGETETKGQIKLRFKTAAGKDVVC+RSFQLTQKASKMEYKAIESVLQTI
Sbjct: 61  SGHSFIHDPKVAGETETKGQIKLRFKTAAGKDVVCVRSFQLTQKASKMEYKAIESVLQTI 120

Query: 452 NPHTGEKVCLSYRCADMDREIPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDI 631
           NPHTGEKVCLSYRCADMD+EIPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDI
Sbjct: 121 NPHTGEKVCLSYRCADMDKEIPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDI 180

Query: 632 FSATRYTK 655
           FSATRYTK
Sbjct: 181 FSATRYTK 188


>ref|XP_002522807.1| DNA repair protein RAD50, putative [Ricinus communis]
           gi|223538045|gb|EEF39658.1| DNA repair protein RAD50,
           putative [Ricinus communis]
          Length = 1256

 Score =  379 bits (972), Expect = e-103
 Identities = 187/188 (99%), Positives = 188/188 (100%)
 Frame = +2

Query: 92  MSTVDKMLIKGIRSFDPENKNVITFFKPLTLIVGPNGAGKTTIIECLKLSCTGELPPNAR 271
           MSTVDKMLIKGIRSFDPENK+VITFFKPLTLIVGPNGAGKTTIIECLKLSCTGELPPNAR
Sbjct: 1   MSTVDKMLIKGIRSFDPENKHVITFFKPLTLIVGPNGAGKTTIIECLKLSCTGELPPNAR 60

Query: 272 SGHSFIHDPKVAGETETKGQIKLRFKTAAGKDVVCIRSFQLTQKASKMEYKAIESVLQTI 451
           SGHSFIHDPKVAGETETKGQIKLRFKTAAGKDVVCIRSFQLTQKASKMEYKAIESVLQTI
Sbjct: 61  SGHSFIHDPKVAGETETKGQIKLRFKTAAGKDVVCIRSFQLTQKASKMEYKAIESVLQTI 120

Query: 452 NPHTGEKVCLSYRCADMDREIPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDI 631
           NPHTGEKVCLSYRCADMDREIPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDI
Sbjct: 121 NPHTGEKVCLSYRCADMDREIPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDI 180

Query: 632 FSATRYTK 655
           FSATRYTK
Sbjct: 181 FSATRYTK 188


>ref|XP_004133980.1| PREDICTED: DNA repair protein RAD50-like [Cucumis sativus]
          Length = 1316

 Score =  377 bits (969), Expect = e-103
 Identities = 185/188 (98%), Positives = 187/188 (99%)
 Frame = +2

Query: 92  MSTVDKMLIKGIRSFDPENKNVITFFKPLTLIVGPNGAGKTTIIECLKLSCTGELPPNAR 271
           MSTVDKMLIKGIRSFDPEN+NVITFFKPLTLIVGPNGAGKTTIIECLKLSCTGELPPNAR
Sbjct: 1   MSTVDKMLIKGIRSFDPENRNVITFFKPLTLIVGPNGAGKTTIIECLKLSCTGELPPNAR 60

Query: 272 SGHSFIHDPKVAGETETKGQIKLRFKTAAGKDVVCIRSFQLTQKASKMEYKAIESVLQTI 451
           SGHSFIHDPKVAGETETKGQIKLRFKTAAGKDVVCIRSFQLTQKASKMEYKAIESV QTI
Sbjct: 61  SGHSFIHDPKVAGETETKGQIKLRFKTAAGKDVVCIRSFQLTQKASKMEYKAIESVFQTI 120

Query: 452 NPHTGEKVCLSYRCADMDREIPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDI 631
           NPHTGEKVCLSYRCADMDREIPALMGVSKA+LENVIFVHQDEANWPLQDPSTLKKKFDDI
Sbjct: 121 NPHTGEKVCLSYRCADMDREIPALMGVSKAVLENVIFVHQDEANWPLQDPSTLKKKFDDI 180

Query: 632 FSATRYTK 655
           FSATRYTK
Sbjct: 181 FSATRYTK 188


>ref|XP_002266665.2| PREDICTED: LOW QUALITY PROTEIN: DNA repair protein RAD50-like
           [Vitis vinifera]
          Length = 1316

 Score =  375 bits (963), Expect = e-102
 Identities = 184/188 (97%), Positives = 187/188 (99%)
 Frame = +2

Query: 92  MSTVDKMLIKGIRSFDPENKNVITFFKPLTLIVGPNGAGKTTIIECLKLSCTGELPPNAR 271
           MSTVDKMLIKGIRSFDPENK+VI FFKPLTLIVGPNGAGKTTIIECLKLSCTGELPPNAR
Sbjct: 1   MSTVDKMLIKGIRSFDPENKHVIAFFKPLTLIVGPNGAGKTTIIECLKLSCTGELPPNAR 60

Query: 272 SGHSFIHDPKVAGETETKGQIKLRFKTAAGKDVVCIRSFQLTQKASKMEYKAIESVLQTI 451
           SGHSFIHDPKVAGETETKGQIKLRFKTAAGKDVVCIRSFQLTQKASKMEYKAIESVLQTI
Sbjct: 61  SGHSFIHDPKVAGETETKGQIKLRFKTAAGKDVVCIRSFQLTQKASKMEYKAIESVLQTI 120

Query: 452 NPHTGEKVCLSYRCADMDREIPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDI 631
           NPHTGEKVCLSYRCADMDREIPALMGVSKA+LENVIFVHQD+ANWPLQDPSTLKKKFDDI
Sbjct: 121 NPHTGEKVCLSYRCADMDREIPALMGVSKAVLENVIFVHQDDANWPLQDPSTLKKKFDDI 180

Query: 632 FSATRYTK 655
           FSATRYTK
Sbjct: 181 FSATRYTK 188


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