BLASTX nr result
ID: Glycyrrhiza23_contig00028736
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza23_contig00028736 (386 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003535712.1| PREDICTED: zinc finger CCCH domain-containin... 120 1e-25 ref|XP_003555260.1| PREDICTED: zinc finger CCCH domain-containin... 116 2e-24 ref|XP_003638442.1| Zinc finger CCCH domain-containing protein, ... 108 3e-22 >ref|XP_003535712.1| PREDICTED: zinc finger CCCH domain-containing protein 15-like [Glycine max] Length = 360 Score = 120 bits (300), Expect = 1e-25 Identities = 64/93 (68%), Positives = 72/93 (77%), Gaps = 5/93 (5%) Frame = -2 Query: 265 MHN*DACSPSSNGGFG---AAGQMHSNGSAFASLYSALSNDNLPSLSGNCSN--GGGVSL 101 MHN DACSPSSNGGFG +AGQ+ S G ++SLYSALSN+NLPSLS +CSN GGGVS+ Sbjct: 1 MHNKDACSPSSNGGFGGGASAGQIPSTGGLYSSLYSALSNENLPSLSASCSNGSGGGVSM 60 Query: 100 YPYSDSGTQYDSCVIQKHQDMVNRHSMCLTRLV 2 YPYS+S IQKHQDMVNR SMCL RLV Sbjct: 61 YPYSES--------IQKHQDMVNRQSMCLNRLV 85 >ref|XP_003555260.1| PREDICTED: zinc finger CCCH domain-containing protein 15-like [Glycine max] Length = 321 Score = 116 bits (290), Expect = 2e-24 Identities = 63/93 (67%), Positives = 70/93 (75%), Gaps = 5/93 (5%) Frame = -2 Query: 265 MHN*DACSPSSNGGFG---AAGQMHSNGSAFASLYSALSNDNLPSLSGNCSN--GGGVSL 101 MHN D CSPSSNGGFG +AGQM S G ++SLYSALS++NLPSLS +CSN GGG SL Sbjct: 1 MHNKDTCSPSSNGGFGGGASAGQMPSTGGLYSSLYSALSSENLPSLSASCSNSSGGGGSL 60 Query: 100 YPYSDSGTQYDSCVIQKHQDMVNRHSMCLTRLV 2 YPYS+S IQKHQDMVNR SMCL RLV Sbjct: 61 YPYSES--------IQKHQDMVNRQSMCLNRLV 85 >ref|XP_003638442.1| Zinc finger CCCH domain-containing protein, partial [Medicago truncatula] gi|355504377|gb|AES85580.1| Zinc finger CCCH domain-containing protein, partial [Medicago truncatula] Length = 225 Score = 108 bits (271), Expect = 3e-22 Identities = 53/68 (77%), Positives = 57/68 (83%) Frame = -2 Query: 205 MHSNGSAFASLYSALSNDNLPSLSGNCSNGGGVSLYPYSDSGTQYDSCVIQKHQDMVNRH 26 M SN FASLYSALSND SL+GN SNGGG SLYPYSD GT+YDSCVIQKHQDMVNRH Sbjct: 1 MQSNAGVFASLYSALSNDLPSSLAGNSSNGGGFSLYPYSDLGTEYDSCVIQKHQDMVNRH 60 Query: 25 SMCLTRLV 2 SM L+RL+ Sbjct: 61 SMFLSRLL 68