BLASTX nr result

ID: Glycyrrhiza23_contig00028736 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00028736
         (386 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003535712.1| PREDICTED: zinc finger CCCH domain-containin...   120   1e-25
ref|XP_003555260.1| PREDICTED: zinc finger CCCH domain-containin...   116   2e-24
ref|XP_003638442.1| Zinc finger CCCH domain-containing protein, ...   108   3e-22

>ref|XP_003535712.1| PREDICTED: zinc finger CCCH domain-containing protein 15-like
           [Glycine max]
          Length = 360

 Score =  120 bits (300), Expect = 1e-25
 Identities = 64/93 (68%), Positives = 72/93 (77%), Gaps = 5/93 (5%)
 Frame = -2

Query: 265 MHN*DACSPSSNGGFG---AAGQMHSNGSAFASLYSALSNDNLPSLSGNCSN--GGGVSL 101
           MHN DACSPSSNGGFG   +AGQ+ S G  ++SLYSALSN+NLPSLS +CSN  GGGVS+
Sbjct: 1   MHNKDACSPSSNGGFGGGASAGQIPSTGGLYSSLYSALSNENLPSLSASCSNGSGGGVSM 60

Query: 100 YPYSDSGTQYDSCVIQKHQDMVNRHSMCLTRLV 2
           YPYS+S        IQKHQDMVNR SMCL RLV
Sbjct: 61  YPYSES--------IQKHQDMVNRQSMCLNRLV 85


>ref|XP_003555260.1| PREDICTED: zinc finger CCCH domain-containing protein 15-like
           [Glycine max]
          Length = 321

 Score =  116 bits (290), Expect = 2e-24
 Identities = 63/93 (67%), Positives = 70/93 (75%), Gaps = 5/93 (5%)
 Frame = -2

Query: 265 MHN*DACSPSSNGGFG---AAGQMHSNGSAFASLYSALSNDNLPSLSGNCSN--GGGVSL 101
           MHN D CSPSSNGGFG   +AGQM S G  ++SLYSALS++NLPSLS +CSN  GGG SL
Sbjct: 1   MHNKDTCSPSSNGGFGGGASAGQMPSTGGLYSSLYSALSSENLPSLSASCSNSSGGGGSL 60

Query: 100 YPYSDSGTQYDSCVIQKHQDMVNRHSMCLTRLV 2
           YPYS+S        IQKHQDMVNR SMCL RLV
Sbjct: 61  YPYSES--------IQKHQDMVNRQSMCLNRLV 85


>ref|XP_003638442.1| Zinc finger CCCH domain-containing protein, partial [Medicago
           truncatula] gi|355504377|gb|AES85580.1| Zinc finger CCCH
           domain-containing protein, partial [Medicago truncatula]
          Length = 225

 Score =  108 bits (271), Expect = 3e-22
 Identities = 53/68 (77%), Positives = 57/68 (83%)
 Frame = -2

Query: 205 MHSNGSAFASLYSALSNDNLPSLSGNCSNGGGVSLYPYSDSGTQYDSCVIQKHQDMVNRH 26
           M SN   FASLYSALSND   SL+GN SNGGG SLYPYSD GT+YDSCVIQKHQDMVNRH
Sbjct: 1   MQSNAGVFASLYSALSNDLPSSLAGNSSNGGGFSLYPYSDLGTEYDSCVIQKHQDMVNRH 60

Query: 25  SMCLTRLV 2
           SM L+RL+
Sbjct: 61  SMFLSRLL 68


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