BLASTX nr result

ID: Glycyrrhiza23_contig00028733 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00028733
         (437 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003539202.1| PREDICTED: uncharacterized protein LOC100813...   110   2e-22
ref|XP_003540760.1| PREDICTED: uncharacterized protein LOC100792...    97   1e-18
ref|XP_003606359.1| Chromatin remodeling complex subunit [Medica...    79   4e-13

>ref|XP_003539202.1| PREDICTED: uncharacterized protein LOC100813071 [Glycine max]
          Length = 2002

 Score =  110 bits (274), Expect = 2e-22
 Identities = 59/107 (55%), Positives = 71/107 (66%), Gaps = 4/107 (3%)
 Frame = -1

Query: 437  VPATSPMFSHGPPRPRPTTYRSGPQMGRWSDSAGGLSTPNL-PAMDLRGNASSQPTMNLP 261
            +P TSP FSH  PRP P  ++S P  G W  S GGLSTPNL  AM+ RG+A+SQP +NL 
Sbjct: 1898 IPVTSPPFSHRTPRPMPANFQSVPHRGHWPVSTGGLSTPNLSAAMNSRGDANSQPGINLA 1957

Query: 260  NVLSHMSG---VASAKLSRFGTNSSSVLPNSLHQATPPDLVCLSDDD 129
            NV  HM     + +  LS+FG NSS    NS HQAT PD+VCLSDD+
Sbjct: 1958 NVRPHMPDLPTLMNLNLSKFGCNSSPA--NSAHQATSPDVVCLSDDE 2002


>ref|XP_003540760.1| PREDICTED: uncharacterized protein LOC100792516 [Glycine max]
          Length = 2010

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 51/106 (48%), Positives = 66/106 (62%), Gaps = 3/106 (2%)
 Frame = -1

Query: 437  VPATSPMFSHGPPRPRPTTYRSGPQMGRWSDSAGGLSTPNLPAMDLRGNASSQPTMNLPN 258
            +P TSP FSH  P   P  ++S P  G W  S GGLSTPNL +++   +A+SQP +NLPN
Sbjct: 1907 IPVTSPPFSHRTPWSMPANFQSVPHRGHWLVSTGGLSTPNLSSVNSCADANSQPGINLPN 1966

Query: 257  VLSHMSG---VASAKLSRFGTNSSSVLPNSLHQATPPDLVCLSDDD 129
            V  HM     + +  LS+F  NS+    NS H AT PD+VCLSDD+
Sbjct: 1967 VRPHMPDLPTLMNLNLSKFSGNSTPA--NSAHPATSPDVVCLSDDE 2010


>ref|XP_003606359.1| Chromatin remodeling complex subunit [Medicago truncatula]
            gi|355507414|gb|AES88556.1| Chromatin remodeling complex
            subunit [Medicago truncatula]
          Length = 1283

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 42/91 (46%), Positives = 58/91 (63%)
 Frame = -1

Query: 401  PRPRPTTYRSGPQMGRWSDSAGGLSTPNLPAMDLRGNASSQPTMNLPNVLSHMSGVASAK 222
            PRP P   + GP  G   ++ GG  +PNL A D+R +++SQ ++NLPN +  MS      
Sbjct: 1199 PRPMPAISQFGPHRGHGHENTGGFPSPNLSAGDMRMSSNSQSSINLPNTMPRMS-----D 1253

Query: 221  LSRFGTNSSSVLPNSLHQATPPDLVCLSDDD 129
             S+FGT SSS+  NS  +ATP D+VC+SDDD
Sbjct: 1254 HSQFGT-SSSMPANSAQEATPSDVVCISDDD 1283


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