BLASTX nr result

ID: Glycyrrhiza23_contig00028718 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00028718
         (609 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003627116.1| F-box/LRR-repeat protein [Medicago truncatul...   264   8e-69
ref|XP_003531612.1| PREDICTED: putative F-box/FBD/LRR-repeat pro...   261   5e-68
ref|XP_003529796.1| PREDICTED: putative F-box/FBD/LRR-repeat pro...   257   1e-66
gb|ABD28502.1| Cyclin-like F-box [Medicago truncatula]                219   4e-55
ref|XP_003597596.1| Polygalacturonase [Medicago truncatula] gi|3...   219   4e-55

>ref|XP_003627116.1| F-box/LRR-repeat protein [Medicago truncatula]
           gi|355521138|gb|AET01592.1| F-box/LRR-repeat protein
           [Medicago truncatula]
          Length = 425

 Score =  264 bits (675), Expect = 8e-69
 Identities = 132/203 (65%), Positives = 148/203 (72%)
 Frame = +1

Query: 1   KYLWTSIPCLNFSSRSFPRLVDFKKFVLWVLSRRDSSHVKFLTYHRSGVDYATDQHLLNK 180
           +Y+W SIPCL F+S+SF RLVDFKKFVLWVLS RD+SHVK L Y+R GVDYATDQ+LLNK
Sbjct: 69  RYIWKSIPCLYFNSKSFTRLVDFKKFVLWVLSHRDNSHVKVLIYYRFGVDYATDQYLLNK 128

Query: 181 VIEYATSHGIQEIIINLRAKTSGSPPVEIPLSLFNCQSLKRLDLKDCHPTNVSLPLGCKX 360
           VIEYA  HG++EI INLRAKTSG PP+EIPL LF CQSLKRL+LKDCHPTNVS P GCK 
Sbjct: 129 VIEYAALHGVEEIRINLRAKTSGCPPIEIPLPLFTCQSLKRLELKDCHPTNVSSPFGCKS 188

Query: 361 XXXXXXXXXXXXPAAADLSNSVASLSEXXXXXXXXXXXXXXXXXSYTGVDSLDPFVHCVN 540
                       P AAD SN  ASLSE                  YTG++ LDPF +CVN
Sbjct: 189 LDILHLEHFSMFPTAADFSNPFASLSELFGFTTLTALHLNSFALCYTGMECLDPFANCVN 248

Query: 541 LKNLHLSEMCFKSELTPKDFVIS 609
           LK L LSEM FKS+L+PKDFVIS
Sbjct: 249 LKILQLSEMSFKSDLSPKDFVIS 271


>ref|XP_003531612.1| PREDICTED: putative F-box/FBD/LRR-repeat protein At1g78840-like
           [Glycine max]
          Length = 450

 Score =  261 bits (668), Expect = 5e-68
 Identities = 136/208 (65%), Positives = 149/208 (71%), Gaps = 5/208 (2%)
 Frame = +1

Query: 1   KYLWTSIPCLNFSSRSFPRLVDFKKFVLWVLSRRDSSHVKFLTYHRSGVDYATDQHLLNK 180
           +YLW S+PCLNFSS+SF RLVDFKKFVLWVL+ RDSSHVK L Y+R GVDYATDQ LLNK
Sbjct: 89  RYLWASVPCLNFSSKSFMRLVDFKKFVLWVLNHRDSSHVKLLVYYRFGVDYATDQGLLNK 148

Query: 181 VIEYATSHGIQEIIINLRAK----TSGSPPVEIPLSLFNCQSLKRLDLKDCHPTNVSLP- 345
           VIEYA SHG++EI INLRAK    TSGSPPVEIP SLF CQSLK+L+LKDCHPTN S   
Sbjct: 149 VIEYAASHGVEEIKINLRAKTAGRTSGSPPVEIPFSLFTCQSLKKLELKDCHPTNGSSSL 208

Query: 346 LGCKXXXXXXXXXXXXXPAAADLSNSVASLSEXXXXXXXXXXXXXXXXXSYTGVDSLDPF 525
           LGCK             P AAD SN  ASL+E                  YTG D LDPF
Sbjct: 209 LGCKSLDILHLEQFSMHPVAADFSNPFASLAELFGFTTLTTLHLNNFILCYTGTDCLDPF 268

Query: 526 VHCVNLKNLHLSEMCFKSELTPKDFVIS 609
            +CV+LKNLHLSEM FKS+L PKDFVIS
Sbjct: 269 ANCVHLKNLHLSEMSFKSDLNPKDFVIS 296


>ref|XP_003529796.1| PREDICTED: putative F-box/FBD/LRR-repeat protein At1g78840-like
           [Glycine max]
          Length = 449

 Score =  257 bits (657), Expect = 1e-66
 Identities = 132/207 (63%), Positives = 147/207 (71%), Gaps = 4/207 (1%)
 Frame = +1

Query: 1   KYLWTSIPCLNFSSRSFPRLVDFKKFVLWVLSRRDSSHVKFLTYHRSGVDYATDQHLLNK 180
           +YLW S+PCL+FSS+SF RLV+FKKFVLWVL+ RDSSHVK L Y+R GVDY TDQ LLNK
Sbjct: 89  RYLWASVPCLSFSSKSFMRLVNFKKFVLWVLNHRDSSHVKLLVYYRFGVDYTTDQGLLNK 148

Query: 181 VIEYATSHGIQEIIINLRAK----TSGSPPVEIPLSLFNCQSLKRLDLKDCHPTNVSLPL 348
           VIEYA SHG++EI INLRAK    TSGSPPVEIPLSLF CQSLK+L+L DCHPTN S PL
Sbjct: 149 VIEYAASHGVEEIKINLRAKTAGRTSGSPPVEIPLSLFTCQSLKKLELTDCHPTNGSSPL 208

Query: 349 GCKXXXXXXXXXXXXXPAAADLSNSVASLSEXXXXXXXXXXXXXXXXXSYTGVDSLDPFV 528
           GC              PAAAD SN  ASL+E                  YTG D LDPF 
Sbjct: 209 GCTSLDMLHLEQFSMHPAAADFSNPFASLAELFGFTTLTTLHLNNFILCYTGTDCLDPFA 268

Query: 529 HCVNLKNLHLSEMCFKSELTPKDFVIS 609
           +CV+LKNLHLSEM F S+L  KDFVIS
Sbjct: 269 NCVHLKNLHLSEMSFNSDLNSKDFVIS 295


>gb|ABD28502.1| Cyclin-like F-box [Medicago truncatula]
          Length = 431

 Score =  219 bits (557), Expect = 4e-55
 Identities = 114/202 (56%), Positives = 135/202 (66%), Gaps = 1/202 (0%)
 Frame = +1

Query: 7   LWTSIPCLNFSSRSFPRLVDFKKFVLWVLSRRDSSHVKFLTYHRSGVDYATDQHLLNKVI 186
           LWTS+P LNF+S+SF RL DF+KFVLWVL RRDSS VK LTY R+GVDYATDQ+L NKVI
Sbjct: 73  LWTSVPSLNFNSKSFSRLADFRKFVLWVLFRRDSSAVKVLTYCRAGVDYATDQNLFNKVI 132

Query: 187 EYATSHGIQEIIINLRAKTSGSPPVEIPLSLFNCQSLKRLDLKDCHPTNVSLPLGC-KXX 363
           ++ATS G++EI +NLRAK  GSPPV+IPLSL  C+SLKRL+LKDCHP  V+ PL C    
Sbjct: 133 DHATSRGVEEIRVNLRAKVHGSPPVDIPLSLLKCESLKRLELKDCHPMKVTWPLACVPEI 192

Query: 364 XXXXXXXXXXXPAAADLSNSVASLSEXXXXXXXXXXXXXXXXXSYTGVDSLDPFVHCVNL 543
                       A  D S S A+L                     TG +SL+P   CVNL
Sbjct: 193 KLLRLEHFTMDHARLDFSKSFATLGNLFGFATLTTLNLSNLILCCTGNESLNPIGSCVNL 252

Query: 544 KNLHLSEMCFKSELTPKDFVIS 609
           KNL+L E+CFKSEL P DF+IS
Sbjct: 253 KNLYLREVCFKSELVPNDFMIS 274


>ref|XP_003597596.1| Polygalacturonase [Medicago truncatula] gi|355486644|gb|AES67847.1|
           Polygalacturonase [Medicago truncatula]
          Length = 548

 Score =  219 bits (557), Expect = 4e-55
 Identities = 114/202 (56%), Positives = 135/202 (66%), Gaps = 1/202 (0%)
 Frame = +1

Query: 7   LWTSIPCLNFSSRSFPRLVDFKKFVLWVLSRRDSSHVKFLTYHRSGVDYATDQHLLNKVI 186
           LWTS+P LNF+S+SF RL DF+KFVLWVL RRDSS VK LTY R+GVDYATDQ+L NKVI
Sbjct: 73  LWTSVPSLNFNSKSFSRLADFRKFVLWVLFRRDSSAVKVLTYCRAGVDYATDQNLFNKVI 132

Query: 187 EYATSHGIQEIIINLRAKTSGSPPVEIPLSLFNCQSLKRLDLKDCHPTNVSLPLGC-KXX 363
           ++ATS G++EI +NLRAK  GSPPV+IPLSL  C+SLKRL+LKDCHP  V+ PL C    
Sbjct: 133 DHATSRGVEEIRVNLRAKVHGSPPVDIPLSLLKCESLKRLELKDCHPMKVTWPLACVPEI 192

Query: 364 XXXXXXXXXXXPAAADLSNSVASLSEXXXXXXXXXXXXXXXXXSYTGVDSLDPFVHCVNL 543
                       A  D S S A+L                     TG +SL+P   CVNL
Sbjct: 193 KLLRLEHFTMDHARLDFSKSFATLGNLFGFATLTTLNLSNLILCCTGNESLNPIGSCVNL 252

Query: 544 KNLHLSEMCFKSELTPKDFVIS 609
           KNL+L E+CFKSEL P DF+IS
Sbjct: 253 KNLYLREVCFKSELVPNDFMIS 274


Top