BLASTX nr result

ID: Glycyrrhiza23_contig00028698 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00028698
         (426 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK48519.1| unknown [Lotus japonicus]                              211   4e-53
ref|XP_003630631.1| Cytidine deaminase [Medicago truncatula] gi|...   202   2e-50
ref|XP_002308296.1| predicted protein [Populus trichocarpa] gi|2...   185   4e-45
ref|XP_003525311.1| PREDICTED: cytidine deaminase-like [Glycine ...   183   1e-44
ref|XP_002282373.1| PREDICTED: cytidine deaminase-like [Vitis vi...   181   4e-44

>gb|AFK48519.1| unknown [Lotus japonicus]
          Length = 294

 Score =  211 bits (538), Expect = 4e-53
 Identities = 108/128 (84%), Positives = 118/128 (92%)
 Frame = +1

Query: 43  MDRPGFVIEPSEAQSLAQASGLTDPTQLLPSLVNSAQSLARPPISNFRVAAVGLSQSGRI 222
           MDRPGF+IEPSE+QS    +GLT  TQLLPSLVN+A++LARPPISNFRVAAVGLS SGRI
Sbjct: 1   MDRPGFIIEPSESQS----TGLT-LTQLLPSLVNAAKTLARPPISNFRVAAVGLSSSGRI 55

Query: 223 FIGVNLEFPGLPLHHSVHAEQFLLTNLSLNAEPTLHSFAVSSAPCGHCRQFLQELRGAPE 402
           FIGVNLEFPGLPLHHSVHAEQFLLTNLSLN E  LHSFAVS+APCGHCRQFLQELRGAPE
Sbjct: 56  FIGVNLEFPGLPLHHSVHAEQFLLTNLSLNNETNLHSFAVSAAPCGHCRQFLQELRGAPE 115

Query: 403 IKVLVTSE 426
           I++L+TSE
Sbjct: 116 IQILITSE 123


>ref|XP_003630631.1| Cytidine deaminase [Medicago truncatula]
           gi|355524653|gb|AET05107.1| Cytidine deaminase [Medicago
           truncatula]
          Length = 287

 Score =  202 bits (514), Expect = 2e-50
 Identities = 100/128 (78%), Positives = 115/128 (89%)
 Frame = +1

Query: 43  MDRPGFVIEPSEAQSLAQASGLTDPTQLLPSLVNSAQSLARPPISNFRVAAVGLSQSGRI 222
           MDRP FVIE +EA+S+A++S LT  TQLLPSLV SAQSLARPPISNF V AVGLS SGRI
Sbjct: 1   MDRPVFVIEATEAKSMAKSSSLT-LTQLLPSLVTSAQSLARPPISNFHVGAVGLSPSGRI 59

Query: 223 FIGVNLEFPGLPLHHSVHAEQFLLTNLSLNAEPTLHSFAVSSAPCGHCRQFLQELRGAPE 402
            IGVN+EFPGLPLHHS+HAEQFLLTNLSL+ EP LHSFAVS+APCGHCRQF QE+RGAP+
Sbjct: 60  LIGVNVEFPGLPLHHSIHAEQFLLTNLSLHDEPNLHSFAVSAAPCGHCRQFFQEIRGAPD 119

Query: 403 IKVLVTSE 426
           I++++TSE
Sbjct: 120 IQIIITSE 127


>ref|XP_002308296.1| predicted protein [Populus trichocarpa] gi|222854272|gb|EEE91819.1|
           predicted protein [Populus trichocarpa]
          Length = 315

 Score =  185 bits (469), Expect = 4e-45
 Identities = 91/128 (71%), Positives = 110/128 (85%)
 Frame = +1

Query: 43  MDRPGFVIEPSEAQSLAQASGLTDPTQLLPSLVNSAQSLARPPISNFRVAAVGLSQSGRI 222
           MD P FVIE SEA+S+A+ SGLT   QLLP+LV SAQ+LARPPIS++ V AVGL  SGRI
Sbjct: 1   MDGPIFVIEASEAESMAKQSGLT-VLQLLPALVKSAQALARPPISDYHVGAVGLGSSGRI 59

Query: 223 FIGVNLEFPGLPLHHSVHAEQFLLTNLSLNAEPTLHSFAVSSAPCGHCRQFLQELRGAPE 402
           F+G NLEFPGLPLHHSVHAEQFL+TNL+LNAEP+L   AVS+APCGHCRQFLQE+R AP+
Sbjct: 60  FLGGNLEFPGLPLHHSVHAEQFLITNLTLNAEPSLKYIAVSAAPCGHCRQFLQEIRHAPD 119

Query: 403 IKVLVTSE 426
           +++L+T +
Sbjct: 120 VQILITGD 127


>ref|XP_003525311.1| PREDICTED: cytidine deaminase-like [Glycine max]
          Length = 293

 Score =  183 bits (465), Expect = 1e-44
 Identities = 96/130 (73%), Positives = 111/130 (85%), Gaps = 2/130 (1%)
 Frame = +1

Query: 43  MDRPG--FVIEPSEAQSLAQASGLTDPTQLLPSLVNSAQSLARPPISNFRVAAVGLSQSG 216
           MD P   FVIE SEA +LA+++ +T P +LLP+LV +AQ LARPPIS F VAAVGL+ SG
Sbjct: 1   MDPPPSKFVIEASEALALAESAAVTLP-ELLPTLVPAAQPLARPPISKFSVAAVGLAPSG 59

Query: 217 RIFIGVNLEFPGLPLHHSVHAEQFLLTNLSLNAEPTLHSFAVSSAPCGHCRQFLQELRGA 396
           RIF+GVNLEFPGLPLHHSVHAEQFL+TNLSLNAEP L S AVS+APCGHCRQFLQELR A
Sbjct: 60  RIFVGVNLEFPGLPLHHSVHAEQFLITNLSLNAEPHLVSLAVSAAPCGHCRQFLQELRAA 119

Query: 397 PEIKVLVTSE 426
            ++K+LVTSE
Sbjct: 120 ADVKILVTSE 129


>ref|XP_002282373.1| PREDICTED: cytidine deaminase-like [Vitis vinifera]
          Length = 301

 Score =  181 bits (460), Expect = 4e-44
 Identities = 93/127 (73%), Positives = 105/127 (82%)
 Frame = +1

Query: 43  MDRPGFVIEPSEAQSLAQASGLTDPTQLLPSLVNSAQSLARPPISNFRVAAVGLSQSGRI 222
           M+R  FVIE SEA+S A+ +GLT   QLLPSLVNSAQ LARPPIS + V AVGL  SGRI
Sbjct: 1   MERSRFVIEASEAESKAEKAGLT-VMQLLPSLVNSAQKLARPPISKYHVGAVGLGSSGRI 59

Query: 223 FIGVNLEFPGLPLHHSVHAEQFLLTNLSLNAEPTLHSFAVSSAPCGHCRQFLQELRGAPE 402
           F+GVNLEFPGLPL+HSVHAEQFL+TNLSL AE  L   AVS+APCGHCRQF QE+R AP+
Sbjct: 60  FLGVNLEFPGLPLNHSVHAEQFLITNLSLKAETHLRCLAVSAAPCGHCRQFFQEIRDAPD 119

Query: 403 IKVLVTS 423
           IKVL+TS
Sbjct: 120 IKVLITS 126


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