BLASTX nr result

ID: Glycyrrhiza23_contig00028689 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00028689
         (244 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003518290.1| PREDICTED: mutS2 protein-like [Glycine max]       108   6e-22
ref|XP_003615478.1| MutS2 protein [Medicago truncatula] gi|35551...   103   1e-20
ref|XP_002317849.1| predicted protein [Populus trichocarpa] gi|2...    84   2e-14
ref|XP_002269872.2| PREDICTED: mutS2 protein-like [Vitis vinifera]     80   2e-13
emb|CBI23113.3| unnamed protein product [Vitis vinifera]               80   2e-13

>ref|XP_003518290.1| PREDICTED: mutS2 protein-like [Glycine max]
          Length = 792

 Score =  108 bits (269), Expect = 6e-22
 Identities = 56/80 (70%), Positives = 60/80 (75%)
 Frame = -3

Query: 242 ETSNLEVNNVNGRWCIRVDSGQKTSFKXXXXXXXXXXXXXXXXXSAIPLNDELQRARSLV 63
           ETS LEVNN++GRWC+RVDSGQKTSFK                 SA+PLNDELQRARSLV
Sbjct: 227 ETSTLEVNNIDGRWCVRVDSGQKTSFKGLLLSSGSGVGSTIEPLSAVPLNDELQRARSLV 286

Query: 62  AKAEADVLLTLTKKMQLDLD 3
            KAEADVLL LTKKMQLDLD
Sbjct: 287 VKAEADVLLALTKKMQLDLD 306


>ref|XP_003615478.1| MutS2 protein [Medicago truncatula] gi|355516813|gb|AES98436.1|
           MutS2 protein [Medicago truncatula]
          Length = 574

 Score =  103 bits (257), Expect = 1e-20
 Identities = 54/80 (67%), Positives = 60/80 (75%)
 Frame = -3

Query: 242 ETSNLEVNNVNGRWCIRVDSGQKTSFKXXXXXXXXXXXXXXXXXSAIPLNDELQRARSLV 63
           ETS LEVNN++GRWCIR DSGQKTSFK                 SA+PLNDELQRARSLV
Sbjct: 234 ETSILEVNNIDGRWCIRTDSGQKTSFKGLLLSSSSGVGSTIEPLSAVPLNDELQRARSLV 293

Query: 62  AKAEADVLLTLTKKMQLDLD 3
           AKAEADVLL LT+K+QLD+D
Sbjct: 294 AKAEADVLLALTRKIQLDVD 313


>ref|XP_002317849.1| predicted protein [Populus trichocarpa] gi|222858522|gb|EEE96069.1|
           predicted protein [Populus trichocarpa]
          Length = 864

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 45/80 (56%), Positives = 54/80 (67%)
 Frame = -3

Query: 242 ETSNLEVNNVNGRWCIRVDSGQKTSFKXXXXXXXXXXXXXXXXXSAIPLNDELQRARSLV 63
           ETS LEV+N++GRWCI   +GQ TSF                  SA+PLNDELQ+AR+ V
Sbjct: 282 ETSFLEVSNIDGRWCINSGTGQLTSFNGLLLSSDSGTGRIIEPLSAVPLNDELQQARASV 341

Query: 62  AKAEADVLLTLTKKMQLDLD 3
           AKAEADVLL LT+KM+ DLD
Sbjct: 342 AKAEADVLLMLTEKMKKDLD 361


>ref|XP_002269872.2| PREDICTED: mutS2 protein-like [Vitis vinifera]
          Length = 791

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 44/80 (55%), Positives = 54/80 (67%)
 Frame = -3

Query: 242 ETSNLEVNNVNGRWCIRVDSGQKTSFKXXXXXXXXXXXXXXXXXSAIPLNDELQRARSLV 63
           ETS+LEV+NV+GRWCI+      T+ K                 SAIPLNDELQ+AR+L 
Sbjct: 227 ETSSLEVSNVDGRWCIK-SGANLTNLKGLLLSSGSGVGSIIEPLSAIPLNDELQKARALA 285

Query: 62  AKAEADVLLTLTKKMQLDLD 3
           AKAEADVLL LT+KMQ+DL+
Sbjct: 286 AKAEADVLLKLTEKMQMDLE 305


>emb|CBI23113.3| unnamed protein product [Vitis vinifera]
          Length = 807

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 44/80 (55%), Positives = 54/80 (67%)
 Frame = -3

Query: 242 ETSNLEVNNVNGRWCIRVDSGQKTSFKXXXXXXXXXXXXXXXXXSAIPLNDELQRARSLV 63
           ETS+LEV+NV+GRWCI+      T+ K                 SAIPLNDELQ+AR+L 
Sbjct: 216 ETSSLEVSNVDGRWCIK-SGANLTNLKGLLLSSGSGVGSIIEPLSAIPLNDELQKARALA 274

Query: 62  AKAEADVLLTLTKKMQLDLD 3
           AKAEADVLL LT+KMQ+DL+
Sbjct: 275 AKAEADVLLKLTEKMQMDLE 294


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