BLASTX nr result

ID: Glycyrrhiza23_contig00028688 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00028688
         (845 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003593623.1| Zinc finger CCCH domain-containing protein [...   329   5e-88
ref|XP_003547155.1| PREDICTED: zinc finger CCCH domain-containin...   307   2e-81
ref|XP_003541728.1| PREDICTED: zinc finger CCCH domain-containin...   302   5e-80
emb|CBI30597.3| unnamed protein product [Vitis vinifera]               91   3e-16
ref|XP_002329830.1| predicted protein [Populus trichocarpa] gi|2...    86   1e-14

>ref|XP_003593623.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
            gi|355482671|gb|AES63874.1| Zinc finger CCCH
            domain-containing protein [Medicago truncatula]
          Length = 892

 Score =  329 bits (843), Expect = 5e-88
 Identities = 172/266 (64%), Positives = 206/266 (77%)
 Frame = +2

Query: 41   DQGVVPGSEEDKEVLPDSIPDADQHRKDSSQHMESEGQEENLGPVSSGVEKPEVMQPSHY 220
            +Q  V   +++K+ +PDS+PDAD+  KDSSQHME + +EENLG VS   + PEV++PSHY
Sbjct: 231  EQETVVEKDKEKDEVPDSLPDADKRSKDSSQHMELDVKEENLGSVSHVPDNPEVIRPSHY 290

Query: 221  MEENDAMPKASVPLSETLTLKKEEFHSEQEISSHPKSRKNLISAEDGKSQGLDVDVENAG 400
            MEENDAM KASV L E LTLK E++  +Q++ S PK  +NLISAEDGK+QGL+VDVEN G
Sbjct: 291  MEENDAMSKASVSLHEELTLKNEDYPLKQKVESPPKPSENLISAEDGKNQGLNVDVENPG 350

Query: 401  SLVQGKTFGGFSGTGCNSKASLSDVKDIDSRATKSSSDMGKDVVTGLLPRDCFVEDADGG 580
             L Q K   G S   CNSKASLSDV DIDSRATK SSD GKDVVTG++ RD FVEDADG 
Sbjct: 351  HL-QRKASEGCSEPDCNSKASLSDVMDIDSRATKPSSDTGKDVVTGIILRDNFVEDADGD 409

Query: 581  QHSKNEIMRSEMESRVELKQMKXXXXXXXXXXAEIKDGKKRPAIICDFFAKGWCIRGSSC 760
            Q+SK ++M+SEMES V++KQ K          AEIKDG KRPAIIC FFAKGWCIRGSSC
Sbjct: 410  QNSKEKVMQSEMESTVDVKQ-KPSRTRIHSPSAEIKDGNKRPAIICAFFAKGWCIRGSSC 468

Query: 761  SFLHIKDTGNNTDQEAEGDLVTAYQR 838
            SFLH+KD+ NNTDQ AEGD+VTA+Q+
Sbjct: 469  SFLHVKDSVNNTDQGAEGDVVTAHQK 494


>ref|XP_003547155.1| PREDICTED: zinc finger CCCH domain-containing protein 27-like
           [Glycine max]
          Length = 713

 Score =  307 bits (787), Expect = 2e-81
 Identities = 169/262 (64%), Positives = 194/262 (74%), Gaps = 4/262 (1%)
 Frame = +2

Query: 65  EEDKEVLPDSIPDADQHRKDSSQHMESEGQEENLGPVSSGVEKPEVMQPS--HYMEENDA 238
           EEDK  +P S  DAD+ RKD  QHME EGQ++NLGPVSS  E PEVM PS  H MEEN+ 
Sbjct: 13  EEDKPAVPGSPLDADKDRKDYGQHMEFEGQDKNLGPVSSVAENPEVMPPSSTHCMEENNV 72

Query: 239 MPKASVPLSETLTLKKEEFHSEQEISSHPKSRKNLISAEDGKSQGLDVDVENAGSLVQGK 418
           M K S    +  TLKKEE   + EISSHPKSR+NL S E  +SQGLDV+VENAGSL+Q K
Sbjct: 73  MLKKS----DIPTLKKEELPLKYEISSHPKSRENLTSVEVCRSQGLDVEVENAGSLLQKK 128

Query: 419 TFGGFSGTGCNSKASLSDVKDIDSRA--TKSSSDMGKDVVTGLLPRDCFVEDADGGQHSK 592
           TF G+   GCNSKA+L    +IDSRA  TKSSSD  +D+V G LPRDC VED++GGQ+S+
Sbjct: 129 TFRGYCVPGCNSKANLCGDNNIDSRARATKSSSDTVQDMVIGPLPRDCLVEDSNGGQNSR 188

Query: 593 NEIMRSEMESRVELKQMKXXXXXXXXXXAEIKDGKKRPAIICDFFAKGWCIRGSSCSFLH 772
           N+IM SEMESR + KQM           AEIKDG KRP IICDFFAKGWCIRGSSCSFLH
Sbjct: 189 NKIMLSEMESRDDAKQMTSRTRNLSPS-AEIKDGNKRPRIICDFFAKGWCIRGSSCSFLH 247

Query: 773 IKDTGNNTDQEAEGDLVTAYQR 838
           IKDTG+NTDQEAE D V+ YQ+
Sbjct: 248 IKDTGDNTDQEAEADSVSTYQK 269


>ref|XP_003541728.1| PREDICTED: zinc finger CCCH domain-containing protein 27-like
           [Glycine max]
          Length = 521

 Score =  302 bits (774), Expect = 5e-80
 Identities = 166/262 (63%), Positives = 195/262 (74%), Gaps = 4/262 (1%)
 Frame = +2

Query: 65  EEDKEVLPDSIPDADQHRKDSSQHMESEGQEENLGPVSSGVEKPEVMQPS--HYMEENDA 238
           EEDK  +P S  DAD+ R+DSSQHME EGQ++ LGPVSS  E PEVM PS  H +EENDA
Sbjct: 5   EEDKLAVPGSPLDADKDRQDSSQHMEFEGQDKILGPVSSVAENPEVMPPSSMHCLEENDA 64

Query: 239 MPKASVPLSETLTLKKEEFHSEQEISSHPKSRKNLISAEDGKSQGLDVDVENAGSLVQGK 418
           M K S    E  TL+K+E   + E SSHPKSR+NL S ED +SQ  DV+VENAGSL+Q +
Sbjct: 65  MLKKS----EIPTLEKDELPLKYEFSSHPKSRENLTSVEDYRSQVFDVEVENAGSLLQNE 120

Query: 419 TFGGFSGTGCNSKASLSDVKDIDSRA--TKSSSDMGKDVVTGLLPRDCFVEDADGGQHSK 592
           TFGG+S  GCNSKA+L    +IDSRA  TKSSSD  +D+V G LPRDC VED++GGQ+S+
Sbjct: 121 TFGGYSEPGCNSKANLCGDNNIDSRARATKSSSDTVQDMVIGPLPRDCLVEDSNGGQNSR 180

Query: 593 NEIMRSEMESRVELKQMKXXXXXXXXXXAEIKDGKKRPAIICDFFAKGWCIRGSSCSFLH 772
            +IM+SE+ESR  +KQM           AEIKDG KRP IICDFFAKGWCIRGSSCSFLH
Sbjct: 181 IKIMQSEIESRDNVKQMTSRTRSLSPG-AEIKDGNKRPRIICDFFAKGWCIRGSSCSFLH 239

Query: 773 IKDTGNNTDQEAEGDLVTAYQR 838
           IKDTG N DQEAE DLVT +Q+
Sbjct: 240 IKDTGANIDQEAEADLVTTHQK 261


>emb|CBI30597.3| unnamed protein product [Vitis vinifera]
          Length = 745

 Score = 90.9 bits (224), Expect = 3e-16
 Identities = 77/263 (29%), Positives = 117/263 (44%), Gaps = 7/263 (2%)
 Frame = +2

Query: 71  DKEVLPDSIPDADQHRKDSSQHMESEGQEENLGPVSSGVEKPEVMQPSHYMEENDAMPKA 250
           D   LPDS   A   R+D S+  ES+G  ++L   SS + K E    S  +   D     
Sbjct: 35  DGRGLPDSAIGAAGDRRDVSRDKESKGHVKHLLSGSSTLGKFEAGLQSDTLAVEDGSSSF 94

Query: 251 SVPLSETLTLKKEEFHS--EQEISSHPKSRKNLISAEDGKSQGLDVDVENAGSLVQGKTF 424
            +       L KE+  S    + S +PK   +    E+ +         N  S V GK  
Sbjct: 95  KIS-----GLSKEQTKSCVNDDHSKYPKLGYHFFPYEENR---------NTKSAVDGK-- 138

Query: 425 GGFSGTGCNSKASLSDVKDIDSRATKSSSDMGKDVVTGLLPRDCFVEDADGGQHSKNEIM 604
             ++      K+ +     +D+R TK  S  GK     +  RD F E+A+  Q S  EI 
Sbjct: 139 --YTEAMPEKKSEI-----MDARNTKPFSVPGKGAAVVIPMRDVFGEEANIVQCSNKEIK 191

Query: 605 RSEMESRVELKQMKXXXXXXXXXXAEI-----KDGKKRPAIICDFFAKGWCIRGSSCSFL 769
           + + +S  E+ Q              +     KD  KRPAIIC +F++GWC+ G +C F+
Sbjct: 192 QIDFQSPEEMNQRASRLAASLLRRRSLSPTDSKDENKRPAIICQYFSQGWCVNGPNCKFM 251

Query: 770 HIKDTGNNTDQEAEGDLVTAYQR 838
           H  D+ +NT+Q+  GD+  A +R
Sbjct: 252 HNIDSMDNTNQQIGGDVAIATRR 274


>ref|XP_002329830.1| predicted protein [Populus trichocarpa] gi|222870892|gb|EEF08023.1|
           predicted protein [Populus trichocarpa]
          Length = 669

 Score = 85.5 bits (210), Expect = 1e-14
 Identities = 68/214 (31%), Positives = 98/214 (45%), Gaps = 10/214 (4%)
 Frame = +2

Query: 212 SHYMEENDAMPKASVPLSETLTLKKEEFHSEQEISSHPKSRKNLISAEDGKSQGLDVDVE 391
           S   E++ +  K S PL   LTL+KE+       S  PK  K+L+ A+  K+  L+  + 
Sbjct: 10  SELREDSVSNFKCSGPLDGPLTLQKEKSCVNYLDSWSPKLSKHLVIAQ--KNGPLEHAIN 67

Query: 392 NAGSLVQGKTFGGFSGTGCNSKASLSDVKD-IDSRATKSSSDMGKDVVTGLLPRDCFVED 568
              +               NSK  LS+  + I    T+     G +V   L  R+C  ++
Sbjct: 68  KTDAFR-------------NSKTHLSNSSEAIAVETTEPFVITGIEVDVVLSKRNCLGQE 114

Query: 569 ADGGQHSKNEIM---------RSEMESRVELKQMKXXXXXXXXXXAEIKDGKKRPAIICD 721
           A+    SK E+          + + ESR+                 E++DG KR A+ICD
Sbjct: 115 ANVVLDSKEELKPVDVKSEDSKEQTESRISRLVASGTRARSLSPSTELRDGNKRAAVICD 174

Query: 722 FFAKGWCIRGSSCSFLHIKDTGNNTDQEAEGDLV 823
           FFAKGWCIRGSSC FLH  +  +NT Q+   D V
Sbjct: 175 FFAKGWCIRGSSCRFLHTTNKADNTGQQLGVDEV 208


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