BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00028669
         (308 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_002149735.1| RNA polymerase beta' subunit [Cicer arietinu...   111   1e-28
ref|YP_003587566.1| RNA polymerase beta'' subunit [Pisum sativum...   108   6e-28
sp|P12227.1|RPOC2_PEA RecName: Full=DNA-directed RNA polymerase ...   108   6e-28
gb|ABD93752.1| RNA polymerase beta chain [Cercis canadensis]          112   6e-28
ref|YP_001381726.2| RNA polymerase beta' subunit [Medicago trunc...   107   1e-27

>ref|YP_002149735.1| RNA polymerase beta' subunit [Cicer arietinum]
           gi|197089802|gb|ACH41072.1| RNA polymerase beta' subunit
           [Cicer arietinum]
          Length = 1376

 Score =  111 bits (277), Expect(2) = 1e-28
 Identities = 56/73 (76%), Positives = 61/73 (83%)
 Frame = -3

Query: 306 LPESSSIMVRNNSIIGIDTPITLNIRSRVGGLVRXXXXXXXXXXXIFSGDIHFPGEMDKI 127
           LPESSSIM+RNNS++GI TPITLNIRSRVGGLVR           IFSG+IHFPGEMDKI
Sbjct: 674 LPESSSIMIRNNSLVGIGTPITLNIRSRVGGLVRLEKKKKKIELKIFSGNIHFPGEMDKI 733

Query: 126 SRHSAILIPPGTV 88
           SRHS+ILIPPGTV
Sbjct: 734 SRHSSILIPPGTV 746



 Score = 40.0 bits (92), Expect(2) = 1e-28
 Identities = 16/16 (100%), Positives = 16/16 (100%)
 Frame = -2

Query: 49  WIYVQWIATTKKKYFV 2
           WIYVQWIATTKKKYFV
Sbjct: 760 WIYVQWIATTKKKYFV 775


>ref|YP_003587566.1| RNA polymerase beta'' subunit [Pisum sativum]
           gi|293338591|gb|ADE43564.1| RNA polymerase beta''
           subunit (chloroplast) [Pisum sativum]
          Length = 1367

 Score =  108 bits (271), Expect(2) = 6e-28
 Identities = 55/73 (75%), Positives = 60/73 (82%)
 Frame = -3

Query: 306 LPESSSIMVRNNSIIGIDTPITLNIRSRVGGLVRXXXXXXXXXXXIFSGDIHFPGEMDKI 127
           LP+SSS+MVRNNS++GI TPIT NIRSRVGGLVR           IFSG+IHFPGEMDKI
Sbjct: 672 LPKSSSLMVRNNSLVGIGTPITFNIRSRVGGLVRLDKKKKKIELKIFSGNIHFPGEMDKI 731

Query: 126 SRHSAILIPPGTV 88
           SRHSAILIPPGTV
Sbjct: 732 SRHSAILIPPGTV 744



 Score = 40.0 bits (92), Expect(2) = 6e-28
 Identities = 16/16 (100%), Positives = 16/16 (100%)
 Frame = -2

Query: 49  WIYVQWIATTKKKYFV 2
           WIYVQWIATTKKKYFV
Sbjct: 758 WIYVQWIATTKKKYFV 773


>sp|P12227.1|RPOC2_PEA RecName: Full=DNA-directed RNA polymerase subunit beta''; AltName:
           Full=PEP; AltName: Full=Plastid-encoded RNA polymerase
           subunit beta''; Short=RNA polymerase subunit beta''
           gi|829325|emb|CAA27545.1| unnamed protein product [Pisum
           sativum]
          Length = 1163

 Score =  108 bits (271), Expect(2) = 6e-28
 Identities = 55/73 (75%), Positives = 60/73 (82%)
 Frame = -3

Query: 306 LPESSSIMVRNNSIIGIDTPITLNIRSRVGGLVRXXXXXXXXXXXIFSGDIHFPGEMDKI 127
           LP+SSS+MVRNNS++GI TPIT NIRSRVGGLVR           IFSG+IHFPGEMDKI
Sbjct: 468 LPKSSSLMVRNNSLVGIGTPITFNIRSRVGGLVRLDKKKKKIELKIFSGNIHFPGEMDKI 527

Query: 126 SRHSAILIPPGTV 88
           SRHSAILIPPGTV
Sbjct: 528 SRHSAILIPPGTV 540



 Score = 40.0 bits (92), Expect(2) = 6e-28
 Identities = 16/16 (100%), Positives = 16/16 (100%)
 Frame = -2

Query: 49  WIYVQWIATTKKKYFV 2
           WIYVQWIATTKKKYFV
Sbjct: 554 WIYVQWIATTKKKYFV 569


>gb|ABD93752.1| RNA polymerase beta chain [Cercis canadensis]
          Length = 864

 Score =  112 bits (281), Expect(2) = 6e-28
 Identities = 58/73 (79%), Positives = 59/73 (80%)
 Frame = -3

Query: 306 LPESSSIMVRNNSIIGIDTPITLNIRSRVGGLVRXXXXXXXXXXXIFSGDIHFPGEMDKI 127
           LPESSSIMVRNNSIIG+DTPIT NIRSRVGGLVR           IFSGDIHFPG MDKI
Sbjct: 226 LPESSSIMVRNNSIIGVDTPITFNIRSRVGGLVRVEKKKKRIELKIFSGDIHFPGXMDKI 285

Query: 126 SRHSAILIPPGTV 88
           SRHS ILIPPGTV
Sbjct: 286 SRHSGILIPPGTV 298



 Score = 36.2 bits (82), Expect(2) = 6e-28
 Identities = 14/16 (87%), Positives = 14/16 (87%)
 Frame = -2

Query: 49  WIYVQWIATTKKKYFV 2
           WIYVQWI  TKKKYFV
Sbjct: 312 WIYVQWITPTKKKYFV 327


>ref|YP_001381726.2| RNA polymerase beta' subunit [Medicago truncatula]
          Length = 1374

 Score =  107 bits (268), Expect(2) = 1e-27
 Identities = 54/73 (73%), Positives = 59/73 (80%)
 Frame = -3

Query: 306 LPESSSIMVRNNSIIGIDTPITLNIRSRVGGLVRXXXXXXXXXXXIFSGDIHFPGEMDKI 127
           LPESSSIMVRNNS++GI TPIT NIRSRVGGLVR           +FSG+IHFPGE DKI
Sbjct: 677 LPESSSIMVRNNSLVGIGTPITFNIRSRVGGLVRLEKKKKKIELKLFSGNIHFPGERDKI 736

Query: 126 SRHSAILIPPGTV 88
           SRHS+ILIPPGTV
Sbjct: 737 SRHSSILIPPGTV 749



 Score = 40.0 bits (92), Expect(2) = 1e-27
 Identities = 16/16 (100%), Positives = 16/16 (100%)
 Frame = -2

Query: 49  WIYVQWIATTKKKYFV 2
           WIYVQWIATTKKKYFV
Sbjct: 762 WIYVQWIATTKKKYFV 777