BLASTX nr result

ID: Glycyrrhiza23_contig00028659 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00028659
         (659 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001381716.1| chloroplast envelope membrane protein [Medic...   308   6e-82
ref|NP_084810.1| envelope membrane protein [Lotus japonicus] gi|...   302   3e-80
gb|AFK38354.1| unknown [Lotus japonicus]                              302   3e-80
ref|YP_005088819.1| envelope membrane protein (chloroplast) [Mil...   302   3e-80
ref|YP_004841795.1| chloroplast envelope membrane protein [Cucum...   302   4e-80

>ref|YP_001381716.1| chloroplast envelope membrane protein [Medicago truncatula]
          Length = 229

 Score =  308 bits (789), Expect = 6e-82
 Identities = 157/187 (83%), Positives = 160/187 (85%)
 Frame = -3

Query: 657 QFEIFLNIIQEKSIXXXXXXXXXXXXXXXXXXEYPETRLQNLRMGIYKETIQLIKTHNQD 478
           Q EIFLNIIQEK+I                  EYPET  QNLRM IYKETIQLI+T+NQD
Sbjct: 43  QSEIFLNIIQEKTILKKLIEFEELFLLDEMLKEYPETHFQNLRMEIYKETIQLIETNNQD 102

Query: 477 RIHTILHFSTNIICFFILSGYSILGNQELIILNSWVQEFLYNLSDTIKAFSILLLTDLCI 298
           RIHTILHF TNIICF ILSGYSI GNQELIILNSWVQEFLYNLSDTIKAFSILLLTDLCI
Sbjct: 103 RIHTILHFCTNIICFLILSGYSIRGNQELIILNSWVQEFLYNLSDTIKAFSILLLTDLCI 162

Query: 297 GFHSTHGWELIIGSVYKDFGFTQNEQIISGLVSTFPVILDTIFKYWIFRYLNRVSPSLVV 118
           GFHSTHGWELIIGSVYKDFGFTQN QIISGLVSTFPVILDTI KYWIFRYLNRVSPSLVV
Sbjct: 163 GFHSTHGWELIIGSVYKDFGFTQNNQIISGLVSTFPVILDTILKYWIFRYLNRVSPSLVV 222

Query: 117 IYHSMND 97
           IYHSMND
Sbjct: 223 IYHSMND 229


>ref|NP_084810.1| envelope membrane protein [Lotus japonicus]
           gi|14285376|sp|P58155.1|CEMA_LOTJA RecName:
           Full=Chloroplast envelope membrane protein
           gi|13358991|dbj|BAB33208.1| hypothetical protein [Lotus
           japonicus]
          Length = 229

 Score =  302 bits (774), Expect = 3e-80
 Identities = 155/187 (82%), Positives = 161/187 (86%)
 Frame = -3

Query: 657 QFEIFLNIIQEKSIXXXXXXXXXXXXXXXXXXEYPETRLQNLRMGIYKETIQLIKTHNQD 478
           Q EIFLNIIQEKSI                  EY ETRLQ LR GI+KETIQLIKTHN+D
Sbjct: 43  QSEIFLNIIQEKSILKKFMELEELFFLDELLKEYSETRLQILRTGIHKETIQLIKTHNED 102

Query: 477 RIHTILHFSTNIICFFILSGYSILGNQELIILNSWVQEFLYNLSDTIKAFSILLLTDLCI 298
           RI+TILHFSTNII F ILSGYSILGNQELIILNSWVQEFLYNLSDTIKAFSILL+TDLCI
Sbjct: 103 RIYTILHFSTNIIYFIILSGYSILGNQELIILNSWVQEFLYNLSDTIKAFSILLVTDLCI 162

Query: 297 GFHSTHGWELIIGSVYKDFGFTQNEQIISGLVSTFPVILDTIFKYWIFRYLNRVSPSLVV 118
           GFHSTHGWEL+IGSVYKDFGF QN+QIISGLVSTFPVILDTI KYWIFRYLNRVSPSLVV
Sbjct: 163 GFHSTHGWELLIGSVYKDFGFIQNDQIISGLVSTFPVILDTILKYWIFRYLNRVSPSLVV 222

Query: 117 IYHSMND 97
           IYHSMND
Sbjct: 223 IYHSMND 229


>gb|AFK38354.1| unknown [Lotus japonicus]
          Length = 199

 Score =  302 bits (774), Expect = 3e-80
 Identities = 155/187 (82%), Positives = 161/187 (86%)
 Frame = -3

Query: 657 QFEIFLNIIQEKSIXXXXXXXXXXXXXXXXXXEYPETRLQNLRMGIYKETIQLIKTHNQD 478
           Q EIFLNIIQEKSI                  EY ETRLQ LR GI+KETIQLIKTHN+D
Sbjct: 13  QSEIFLNIIQEKSILKKFMELEELFFLDELLKEYSETRLQILRTGIHKETIQLIKTHNED 72

Query: 477 RIHTILHFSTNIICFFILSGYSILGNQELIILNSWVQEFLYNLSDTIKAFSILLLTDLCI 298
           RI+TILHFSTNII F ILSGYSILGNQELIILNSWVQEFLYNLSDTIKAFSILL+TDLCI
Sbjct: 73  RIYTILHFSTNIIYFIILSGYSILGNQELIILNSWVQEFLYNLSDTIKAFSILLVTDLCI 132

Query: 297 GFHSTHGWELIIGSVYKDFGFTQNEQIISGLVSTFPVILDTIFKYWIFRYLNRVSPSLVV 118
           GFHSTHGWEL+IGSVYKDFGF QN+QIISGLVSTFPVILDTI KYWIFRYLNRVSPSLVV
Sbjct: 133 GFHSTHGWELLIGSVYKDFGFIQNDQIISGLVSTFPVILDTILKYWIFRYLNRVSPSLVV 192

Query: 117 IYHSMND 97
           IYHSMND
Sbjct: 193 IYHSMND 199


>ref|YP_005088819.1| envelope membrane protein (chloroplast) [Millettia pinnata]
           gi|356474838|gb|AET11356.1| envelope membrane protein
           (chloroplast) [Millettia pinnata]
          Length = 229

 Score =  302 bits (774), Expect = 3e-80
 Identities = 154/187 (82%), Positives = 159/187 (85%)
 Frame = -3

Query: 657 QFEIFLNIIQEKSIXXXXXXXXXXXXXXXXXXEYPETRLQNLRMGIYKETIQLIKTHNQD 478
           Q EIFLN I+EKSI                  EY ETRLQNLR GI KETIQLIKT+N+D
Sbjct: 43  QSEIFLNAIKEKSIFKKFIELEELFFLDEMLKEYSETRLQNLRTGINKETIQLIKTYNED 102

Query: 477 RIHTILHFSTNIICFFILSGYSILGNQELIILNSWVQEFLYNLSDTIKAFSILLLTDLCI 298
           RIHTILH STNIICFFILS YSILGNQEL ILNSWVQEFLYNLSDTIKAFSILLLTDLCI
Sbjct: 103 RIHTILHLSTNIICFFILSAYSILGNQELFILNSWVQEFLYNLSDTIKAFSILLLTDLCI 162

Query: 297 GFHSTHGWELIIGSVYKDFGFTQNEQIISGLVSTFPVILDTIFKYWIFRYLNRVSPSLVV 118
           GFHSTHGWEL+IGSVYKDFGF QN+QIISGLVSTFPVILDTI KYWIFRYLNRVSPSLVV
Sbjct: 163 GFHSTHGWELMIGSVYKDFGFAQNDQIISGLVSTFPVILDTIIKYWIFRYLNRVSPSLVV 222

Query: 117 IYHSMND 97
           IYHSMND
Sbjct: 223 IYHSMND 229


>ref|YP_004841795.1| chloroplast envelope membrane protein [Cucumis melo subsp. melo]
           gi|344030503|gb|AEM76904.1| chloroplast envelope
           membrane protein [Cucumis melo subsp. melo]
          Length = 229

 Score =  302 bits (773), Expect = 4e-80
 Identities = 152/187 (81%), Positives = 159/187 (85%)
 Frame = -3

Query: 657 QFEIFLNIIQEKSIXXXXXXXXXXXXXXXXXXEYPETRLQNLRMGIYKETIQLIKTHNQD 478
           Q EIFLN IQEKSI                  EYPET LQ LR+GIYKETIQLIK HN+D
Sbjct: 43  QSEIFLNDIQEKSIIKKVLELEELFLLDEMLKEYPETHLQKLRIGIYKETIQLIKMHNED 102

Query: 477 RIHTILHFSTNIICFFILSGYSILGNQELIILNSWVQEFLYNLSDTIKAFSILLLTDLCI 298
           RIH ILHFSTNIICF ILSGYSILGN+EL+ILNSWVQEFLYNLSDTIKAFSILLLTDLCI
Sbjct: 103 RIHMILHFSTNIICFVILSGYSILGNEELVILNSWVQEFLYNLSDTIKAFSILLLTDLCI 162

Query: 297 GFHSTHGWELIIGSVYKDFGFTQNEQIISGLVSTFPVILDTIFKYWIFRYLNRVSPSLVV 118
           GFHS HGWEL+IGSVYKDFGF+ N+QIISGLVSTFPVILDTI KYWIFRYLNRVSPSLVV
Sbjct: 163 GFHSPHGWELMIGSVYKDFGFSHNDQIISGLVSTFPVILDTILKYWIFRYLNRVSPSLVV 222

Query: 117 IYHSMND 97
           IYHSMND
Sbjct: 223 IYHSMND 229


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