BLASTX nr result

ID: Glycyrrhiza23_contig00028655 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00028655
         (592 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003541534.1| PREDICTED: pentatricopeptide repeat-containi...   270   1e-70
ref|XP_003528453.1| PREDICTED: pentatricopeptide repeat-containi...   270   1e-70
ref|XP_003635166.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   245   4e-63
ref|XP_004155648.1| PREDICTED: pentatricopeptide repeat-containi...   244   8e-63
ref|XP_004134955.1| PREDICTED: pentatricopeptide repeat-containi...   244   8e-63

>ref|XP_003541534.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g33760-like [Glycine max]
          Length = 582

 Score =  270 bits (690), Expect = 1e-70
 Identities = 132/174 (75%), Positives = 144/174 (82%)
 Frame = -2

Query: 588 QPENPSHYVLLSNMYASVGRMDRVESVRNVMIQRGLRKKVGYSTIGVNDKTYFFSMGDKS 409
           +PENP HYVLLSNMYA  GRMDRVESVRNVMIQRGL+K+VGYSTI V++++Y FSMGDKS
Sbjct: 409 EPENPGHYVLLSNMYALAGRMDRVESVRNVMIQRGLKKQVGYSTIDVDNRSYLFSMGDKS 468

Query: 408 HPETNEIYRYLDELIGRCKEVGYAPVPXXXXXXXXXXXXXXXXXXHSEKLAVAFGLMRTG 229
           HPETNEIY +LDELI RCK+ GYAPVP                  HSEKLAVAFGLM+TG
Sbjct: 469 HPETNEIYCFLDELIWRCKDAGYAPVPESAMHELEGEEREYALRYHSEKLAVAFGLMKTG 528

Query: 228 HGVTLRVVKNLRICEDCHSAIKFISVVTNREIIVRDKLRFHHFRKGSCSCLDYW 67
            GVTLR+VKNLRICEDCHSAIKFIS V NREIIVRDKLRFHHFR+GSCSC DYW
Sbjct: 529 DGVTLRIVKNLRICEDCHSAIKFISAVMNREIIVRDKLRFHHFREGSCSCSDYW 582


>ref|XP_003528453.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g33760-like [Glycine max]
          Length = 582

 Score =  270 bits (690), Expect = 1e-70
 Identities = 132/174 (75%), Positives = 143/174 (82%)
 Frame = -2

Query: 588 QPENPSHYVLLSNMYASVGRMDRVESVRNVMIQRGLRKKVGYSTIGVNDKTYFFSMGDKS 409
           +PENP HYVLLSNMYA  GRMDRVESVRNVMIQRGL+K+VGYSTI V +++Y FSMGDKS
Sbjct: 409 EPENPGHYVLLSNMYALAGRMDRVESVRNVMIQRGLKKQVGYSTIDVENRSYLFSMGDKS 468

Query: 408 HPETNEIYRYLDELIGRCKEVGYAPVPXXXXXXXXXXXXXXXXXXHSEKLAVAFGLMRTG 229
           HPETNEIY YLDEL+ RCK+ GYAP P                  HSEKLAVAFGLM+T 
Sbjct: 469 HPETNEIYCYLDELMWRCKDAGYAPAPESAMHELEEEEREYALRYHSEKLAVAFGLMKTC 528

Query: 228 HGVTLRVVKNLRICEDCHSAIKFISVVTNREIIVRDKLRFHHFRKGSCSCLDYW 67
           HGVTLR+VKNLRICEDCHSAIKFISVV NREIIVRDKLRFHHFR+GSCSC DYW
Sbjct: 529 HGVTLRIVKNLRICEDCHSAIKFISVVMNREIIVRDKLRFHHFREGSCSCSDYW 582


>ref|XP_003635166.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g33760-like [Vitis vinifera]
          Length = 561

 Score =  245 bits (626), Expect = 4e-63
 Identities = 116/174 (66%), Positives = 136/174 (78%)
 Frame = -2

Query: 588 QPENPSHYVLLSNMYASVGRMDRVESVRNVMIQRGLRKKVGYSTIGVNDKTYFFSMGDKS 409
           +PENPSHYVLLSN+YA  GRM+RVE VRN+MI++GL+K+VGYS I V  K+Y FSMGD+S
Sbjct: 388 EPENPSHYVLLSNVYALAGRMERVEMVRNMMIRKGLKKQVGYSIIEVGQKSYLFSMGDRS 447

Query: 408 HPETNEIYRYLDELIGRCKEVGYAPVPXXXXXXXXXXXXXXXXXXHSEKLAVAFGLMRTG 229
           HPET EIY+YLDEL+ R KE GY P P                  HSEKLA+AFGLM+T 
Sbjct: 448 HPETTEIYKYLDELMLRSKEAGYVPAPELVMHELEEEEREYALRYHSEKLAIAFGLMKTS 507

Query: 228 HGVTLRVVKNLRICEDCHSAIKFISVVTNREIIVRDKLRFHHFRKGSCSCLDYW 67
           HG+T+R+VKNLR+CEDCHSAIKFIS + NREIIVRDKLRFHHF+ G CSC DYW
Sbjct: 508 HGMTIRIVKNLRMCEDCHSAIKFISNIANREIIVRDKLRFHHFKNGLCSCQDYW 561


>ref|XP_004155648.1| PREDICTED: pentatricopeptide repeat-containing protein At2g33760-like
            [Cucumis sativus]
          Length = 663

 Score =  244 bits (623), Expect = 8e-63
 Identities = 115/175 (65%), Positives = 135/175 (77%)
 Frame = -2

Query: 591  LQPENPSHYVLLSNMYASVGRMDRVESVRNVMIQRGLRKKVGYSTIGVNDKTYFFSMGDK 412
            ++PENP HYV+LSN+YA  GRMDRVE VRN+M +R L+K+VGYSTI +N KTY FSMGDK
Sbjct: 489  VEPENPGHYVMLSNIYALAGRMDRVEMVRNMMTRRRLKKQVGYSTIEINRKTYLFSMGDK 548

Query: 411  SHPETNEIYRYLDELIGRCKEVGYAPVPXXXXXXXXXXXXXXXXXXHSEKLAVAFGLMRT 232
            SHP+TN IYRYLDEL+ RC E GY P P                  HSEKLA+AFGL++T
Sbjct: 549  SHPQTNTIYRYLDELMCRCSESGYVPAPESLMHDLEEEERDYALRYHSEKLALAFGLLKT 608

Query: 231  GHGVTLRVVKNLRICEDCHSAIKFISVVTNREIIVRDKLRFHHFRKGSCSCLDYW 67
              G T+R+VKNLRICEDCHSAIK IS++ +REIIVRDK RFHHF+ GSCSCLDYW
Sbjct: 609  NQGETIRIVKNLRICEDCHSAIKHISIIADREIIVRDKFRFHHFKDGSCSCLDYW 663


>ref|XP_004134955.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g33760-like [Cucumis sativus]
          Length = 599

 Score =  244 bits (623), Expect = 8e-63
 Identities = 115/175 (65%), Positives = 135/175 (77%)
 Frame = -2

Query: 591 LQPENPSHYVLLSNMYASVGRMDRVESVRNVMIQRGLRKKVGYSTIGVNDKTYFFSMGDK 412
           ++PENP HYV+LSN+YA  GRMDRVE VRN+M +R L+K+VGYSTI +N KTY FSMGDK
Sbjct: 425 VEPENPGHYVMLSNIYALAGRMDRVEMVRNMMTRRRLKKQVGYSTIEINRKTYLFSMGDK 484

Query: 411 SHPETNEIYRYLDELIGRCKEVGYAPVPXXXXXXXXXXXXXXXXXXHSEKLAVAFGLMRT 232
           SHP+TN IYRYLDEL+ RC E GY P P                  HSEKLA+AFGL++T
Sbjct: 485 SHPQTNTIYRYLDELMCRCSESGYVPAPESLMHDLEEEERDYALRYHSEKLALAFGLLKT 544

Query: 231 GHGVTLRVVKNLRICEDCHSAIKFISVVTNREIIVRDKLRFHHFRKGSCSCLDYW 67
             G T+R+VKNLRICEDCHSAIK IS++ +REIIVRDK RFHHF+ GSCSCLDYW
Sbjct: 545 NQGETIRIVKNLRICEDCHSAIKHISIIADREIIVRDKFRFHHFKDGSCSCLDYW 599


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