BLASTX nr result

ID: Glycyrrhiza23_contig00028654 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00028654
         (316 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003525118.1| PREDICTED: chromatin assembly factor 1 subun...   202   3e-50
ref|NP_001235282.1| FAS2 [Glycine max] gi|11096297|gb|AAG30285.1...   195   3e-48
ref|XP_003630256.1| Chromatin assembly factor 1 subunit B [Medic...   188   3e-46
ref|XP_002274967.1| PREDICTED: chromatin assembly factor 1 subun...   170   1e-40
gb|AEL99232.1| transducin/WD40 domain-containing protein, partia...   168   4e-40

>ref|XP_003525118.1| PREDICTED: chromatin assembly factor 1 subunit B-like [Glycine max]
          Length = 585

 Score =  202 bits (513), Expect = 3e-50
 Identities = 99/105 (94%), Positives = 104/105 (99%)
 Frame = +1

Query: 1   PDGSFLLVPAGSYKISTASESVNAAYIFSRKDLSRPAIQLPCASKAVVAVRFCPIFFNLR 180
           PDGSFLLVPAGSYKISTASESVNAAYIFSRKDLSRPAIQLPCASKAVVAVRFCPIFF LR
Sbjct: 237 PDGSFLLVPAGSYKISTASESVNAAYIFSRKDLSRPAIQLPCASKAVVAVRFCPIFFKLR 296

Query: 181 GTNSAGLFKLPYRVVFAVATLNSLYVYDTESTSPIAILAGLHYAA 315
           GT+SAGLFKLPYR++FAVATLNSLY+YDTESTSPIA+LAGLHYAA
Sbjct: 297 GTHSAGLFKLPYRIIFAVATLNSLYIYDTESTSPIAVLAGLHYAA 341


>ref|NP_001235282.1| FAS2 [Glycine max] gi|11096297|gb|AAG30285.1|AF308859_1 FAS2
           [Glycine max]
          Length = 590

 Score =  195 bits (496), Expect = 3e-48
 Identities = 98/105 (93%), Positives = 102/105 (97%)
 Frame = +1

Query: 1   PDGSFLLVPAGSYKISTASESVNAAYIFSRKDLSRPAIQLPCASKAVVAVRFCPIFFNLR 180
           PDGSFLLVPA SYKISTASESVNAAYIFSRKDLSRPAIQLPCASKAVVAVRFCPIFF LR
Sbjct: 237 PDGSFLLVPA-SYKISTASESVNAAYIFSRKDLSRPAIQLPCASKAVVAVRFCPIFFKLR 295

Query: 181 GTNSAGLFKLPYRVVFAVATLNSLYVYDTESTSPIAILAGLHYAA 315
           GTNSAGLFK PYR++FAVATLNSLY+YDTESTSPIA+LAGLHYAA
Sbjct: 296 GTNSAGLFKFPYRIIFAVATLNSLYIYDTESTSPIAVLAGLHYAA 340


>ref|XP_003630256.1| Chromatin assembly factor 1 subunit B [Medicago truncatula]
           gi|355524278|gb|AET04732.1| Chromatin assembly factor 1
           subunit B [Medicago truncatula]
          Length = 631

 Score =  188 bits (478), Expect = 3e-46
 Identities = 96/108 (88%), Positives = 99/108 (91%), Gaps = 4/108 (3%)
 Frame = +1

Query: 1   PDGSFLLVPAGSYKISTASESVNAAYIFSRKDLSR----PAIQLPCASKAVVAVRFCPIF 168
           PDGSFLLVPAGSYKI TASESVNAAYIFSRKDLSR    PAIQLPCASKAVVAVRFCP+ 
Sbjct: 237 PDGSFLLVPAGSYKIGTASESVNAAYIFSRKDLSRYVYQPAIQLPCASKAVVAVRFCPVL 296

Query: 169 FNLRGTNSAGLFKLPYRVVFAVATLNSLYVYDTESTSPIAILAGLHYA 312
           F L+GTNS GLFKLPYRVVFAVATLNSLY+YDTESTSPIAI AGLHYA
Sbjct: 297 FKLKGTNSDGLFKLPYRVVFAVATLNSLYIYDTESTSPIAIFAGLHYA 344


>ref|XP_002274967.1| PREDICTED: chromatin assembly factor 1 subunit B [Vitis vinifera]
           gi|296088566|emb|CBI37557.3| unnamed protein product
           [Vitis vinifera]
          Length = 456

 Score =  170 bits (430), Expect = 1e-40
 Identities = 82/105 (78%), Positives = 94/105 (89%)
 Frame = +1

Query: 1   PDGSFLLVPAGSYKISTASESVNAAYIFSRKDLSRPAIQLPCASKAVVAVRFCPIFFNLR 180
           PDGSFLLVPAGSYK S AS  VN AY+FSRKDLSRPA+QLP +SK V+AVRFCP+ F+L+
Sbjct: 238 PDGSFLLVPAGSYKFSPASGPVNTAYVFSRKDLSRPALQLPGSSKPVIAVRFCPMAFHLQ 297

Query: 181 GTNSAGLFKLPYRVVFAVATLNSLYVYDTESTSPIAILAGLHYAA 315
           G+NSAG FKLPYR++FAVA+LNSLY+YDTES  PIAILAGLHYAA
Sbjct: 298 GSNSAGFFKLPYRLIFAVASLNSLYIYDTESIPPIAILAGLHYAA 342


>gb|AEL99232.1| transducin/WD40 domain-containing protein, partial [Silene
           latifolia]
          Length = 231

 Score =  168 bits (426), Expect = 4e-40
 Identities = 79/105 (75%), Positives = 94/105 (89%)
 Frame = +1

Query: 1   PDGSFLLVPAGSYKISTASESVNAAYIFSRKDLSRPAIQLPCASKAVVAVRFCPIFFNLR 180
           PDGSFLLVPAGS+K+S ASE VN AY+FSRKDLSRPA++LP ASK V+AVRFCP+ F+LR
Sbjct: 88  PDGSFLLVPAGSFKVSLASEPVNTAYVFSRKDLSRPALRLPGASKPVIAVRFCPLAFSLR 147

Query: 181 GTNSAGLFKLPYRVVFAVATLNSLYVYDTESTSPIAILAGLHYAA 315
           G+NS G  KLPYR++FAVATLNSLY+YDTE  +P+A+LAGLHYAA
Sbjct: 148 GSNSPGFSKLPYRLIFAVATLNSLYIYDTECVAPLAVLAGLHYAA 192


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