BLASTX nr result

ID: Glycyrrhiza23_contig00028633 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00028633
         (264 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003532145.1| PREDICTED: zinc finger CCCH domain-containin...   157   7e-37
ref|XP_003551813.1| PREDICTED: zinc finger CCCH domain-containin...   157   9e-37
ref|XP_002324344.1| predicted protein [Populus trichocarpa] gi|2...   153   2e-35
ref|XP_002285580.1| PREDICTED: zinc finger CCCH domain-containin...   149   2e-34
gb|AFK43064.1| unknown [Medicago truncatula]                          149   2e-34

>ref|XP_003532145.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like
           [Glycine max]
          Length = 495

 Score =  157 bits (398), Expect = 7e-37
 Identities = 78/88 (88%), Positives = 82/88 (93%)
 Frame = +1

Query: 1   EEEEAQGLGFLEITNLQKGIQTDTAIFAKWENHTRGIASKMMANMGYREGMGLGVTGQGM 180
           EEEE+QG+GFLE TNLQ+GIQT+TA FA WENHTRGIASKMMANMGYREGMGLGVTGQGM
Sbjct: 261 EEEESQGIGFLESTNLQRGIQTETATFATWENHTRGIASKMMANMGYREGMGLGVTGQGM 320

Query: 181 LDPIPVKVLPPKQSLDHALESHNKGEEN 264
           LDPI VKVLPPKQSLDHALESH K EEN
Sbjct: 321 LDPIAVKVLPPKQSLDHALESH-KREEN 347


>ref|XP_003551813.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like
           [Glycine max]
          Length = 492

 Score =  157 bits (397), Expect = 9e-37
 Identities = 75/84 (89%), Positives = 79/84 (94%)
 Frame = +1

Query: 1   EEEEAQGLGFLEITNLQKGIQTDTAIFAKWENHTRGIASKMMANMGYREGMGLGVTGQGM 180
           EEEE QGLGFLE TNL++GIQT+TA FA WENHTRGIASKMMANMGYREGMGLGVTGQGM
Sbjct: 261 EEEEPQGLGFLESTNLRRGIQTETATFATWENHTRGIASKMMANMGYREGMGLGVTGQGM 320

Query: 181 LDPIPVKVLPPKQSLDHALESHNK 252
           LDPIPVKVLPPKQSLDHALESH +
Sbjct: 321 LDPIPVKVLPPKQSLDHALESHKR 344


>ref|XP_002324344.1| predicted protein [Populus trichocarpa] gi|222865778|gb|EEF02909.1|
           predicted protein [Populus trichocarpa]
          Length = 495

 Score =  153 bits (386), Expect = 2e-35
 Identities = 73/85 (85%), Positives = 78/85 (91%)
 Frame = +1

Query: 1   EEEEAQGLGFLEITNLQKGIQTDTAIFAKWENHTRGIASKMMANMGYREGMGLGVTGQGM 180
           +EE A+GLGFLE TNLQ+GIQT TAIFA WENHTRGIASKMMANMGYREGMGLG +GQGM
Sbjct: 264 DEESAEGLGFLESTNLQRGIQTGTAIFATWENHTRGIASKMMANMGYREGMGLGASGQGM 323

Query: 181 LDPIPVKVLPPKQSLDHALESHNKG 255
           LDPIPVKVLPPKQSLDHALES  +G
Sbjct: 324 LDPIPVKVLPPKQSLDHALESQKEG 348


>ref|XP_002285580.1| PREDICTED: zinc finger CCCH domain-containing protein 18 [Vitis
           vinifera]
          Length = 496

 Score =  149 bits (377), Expect = 2e-34
 Identities = 73/88 (82%), Positives = 81/88 (92%)
 Frame = +1

Query: 1   EEEEAQGLGFLEITNLQKGIQTDTAIFAKWENHTRGIASKMMANMGYREGMGLGVTGQGM 180
           EEE +QGLGFLE T LQ+GIQT+TAIFAKWENHTRGIASKMMANMGYREGMGLG +GQG+
Sbjct: 263 EEEGSQGLGFLESTALQRGIQTETAIFAKWENHTRGIASKMMANMGYREGMGLGASGQGI 322

Query: 181 LDPIPVKVLPPKQSLDHALESHNKGEEN 264
           +DP+ VKVLPPKQSLDHALESH + EEN
Sbjct: 323 VDPLSVKVLPPKQSLDHALESH-ENEEN 349


>gb|AFK43064.1| unknown [Medicago truncatula]
          Length = 259

 Score =  149 bits (376), Expect = 2e-34
 Identities = 69/82 (84%), Positives = 79/82 (96%)
 Frame = +1

Query: 1   EEEEAQGLGFLEITNLQKGIQTDTAIFAKWENHTRGIASKMMANMGYREGMGLGVTGQGM 180
           EEEE QGLGF++ TNLQKG+QT+TAIFAKWENHTRG+AS+MMANMGY+EGMGLG+TGQGM
Sbjct: 27  EEEEPQGLGFMDSTNLQKGVQTETAIFAKWENHTRGMASEMMANMGYQEGMGLGLTGQGM 86

Query: 181 LDPIPVKVLPPKQSLDHALESH 246
           +DPIPVKVLP KQSLDHAL+SH
Sbjct: 87  VDPIPVKVLPLKQSLDHALKSH 108


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