BLASTX nr result

ID: Glycyrrhiza23_contig00028618 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00028618
         (636 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003522515.1| PREDICTED: tyrosyl-DNA phosphodiesterase 1-l...   408   e-112
ref|XP_003522514.1| PREDICTED: tyrosyl-DNA phosphodiesterase 1-l...   408   e-112
ref|XP_003622687.1| Tyrosyl-DNA phosphodiesterase [Medicago trun...   402   e-110
ref|XP_002518536.1| tyrosyl-DNA phosphodiesterase, putative [Ric...   384   e-105
ref|XP_002305614.1| predicted protein [Populus trichocarpa] gi|2...   373   e-101

>ref|XP_003522515.1| PREDICTED: tyrosyl-DNA phosphodiesterase 1-like isoform 2 [Glycine
           max]
          Length = 599

 Score =  408 bits (1049), Expect = e-112
 Identities = 191/211 (90%), Positives = 202/211 (95%)
 Frame = +2

Query: 2   WILHKPPLPISFGTHHSKSMLLVYPRGVRIIVHTANLIYVDWNNKSQGLWMQDFPWKDQN 181
           WILHKP LPISFGTHHSK+M+L+YP+GVR+IVHTANLIYVDWNNKSQGLWMQDFPWKDQN
Sbjct: 211 WILHKPSLPISFGTHHSKAMMLIYPQGVRVIVHTANLIYVDWNNKSQGLWMQDFPWKDQN 270

Query: 182 SLTKGSGFENDLVEYLSMLKWPEFSVKLPSLGNFSICPSFFKKFDYSDAMVRLIASVPGY 361
           SL+KGSGFENDLVEYLS+LKWPEFSV LP LG+ SICPSFF+KFDYSDA VRLIASVPGY
Sbjct: 271 SLSKGSGFENDLVEYLSVLKWPEFSVNLPFLGSVSICPSFFRKFDYSDARVRLIASVPGY 330

Query: 362 HSGPSLKKWGHMKLRSVLQECTFDEEFKKSPLVYQFSSLGSLDEKWMAELASSMSAGLSE 541
           HSG SLKKWGHMKLRS+LQECTFDEEFKKSPLVYQFSSLGSLDEKWM ELASSMSAGLSE
Sbjct: 331 HSGSSLKKWGHMKLRSLLQECTFDEEFKKSPLVYQFSSLGSLDEKWMTELASSMSAGLSE 390

Query: 542 DKVPLGMGEAQIIWPTVEDVRCSLEGYAAGS 634
           DK PLGMGE QIIWPTVEDVRCSLEGYAAG+
Sbjct: 391 DKTPLGMGEPQIIWPTVEDVRCSLEGYAAGN 421


>ref|XP_003522514.1| PREDICTED: tyrosyl-DNA phosphodiesterase 1-like isoform 1 [Glycine
           max]
          Length = 610

 Score =  408 bits (1049), Expect = e-112
 Identities = 191/211 (90%), Positives = 202/211 (95%)
 Frame = +2

Query: 2   WILHKPPLPISFGTHHSKSMLLVYPRGVRIIVHTANLIYVDWNNKSQGLWMQDFPWKDQN 181
           WILHKP LPISFGTHHSK+M+L+YP+GVR+IVHTANLIYVDWNNKSQGLWMQDFPWKDQN
Sbjct: 222 WILHKPSLPISFGTHHSKAMMLIYPQGVRVIVHTANLIYVDWNNKSQGLWMQDFPWKDQN 281

Query: 182 SLTKGSGFENDLVEYLSMLKWPEFSVKLPSLGNFSICPSFFKKFDYSDAMVRLIASVPGY 361
           SL+KGSGFENDLVEYLS+LKWPEFSV LP LG+ SICPSFF+KFDYSDA VRLIASVPGY
Sbjct: 282 SLSKGSGFENDLVEYLSVLKWPEFSVNLPFLGSVSICPSFFRKFDYSDARVRLIASVPGY 341

Query: 362 HSGPSLKKWGHMKLRSVLQECTFDEEFKKSPLVYQFSSLGSLDEKWMAELASSMSAGLSE 541
           HSG SLKKWGHMKLRS+LQECTFDEEFKKSPLVYQFSSLGSLDEKWM ELASSMSAGLSE
Sbjct: 342 HSGSSLKKWGHMKLRSLLQECTFDEEFKKSPLVYQFSSLGSLDEKWMTELASSMSAGLSE 401

Query: 542 DKVPLGMGEAQIIWPTVEDVRCSLEGYAAGS 634
           DK PLGMGE QIIWPTVEDVRCSLEGYAAG+
Sbjct: 402 DKTPLGMGEPQIIWPTVEDVRCSLEGYAAGN 432


>ref|XP_003622687.1| Tyrosyl-DNA phosphodiesterase [Medicago truncatula]
           gi|355497702|gb|AES78905.1| Tyrosyl-DNA
           phosphodiesterase [Medicago truncatula]
          Length = 849

 Score =  402 bits (1033), Expect = e-110
 Identities = 189/205 (92%), Positives = 196/205 (95%)
 Frame = +2

Query: 2   WILHKPPLPISFGTHHSKSMLLVYPRGVRIIVHTANLIYVDWNNKSQGLWMQDFPWKDQN 181
           WILHKPPLPISFGTHHSK+M LVYPRGVR+I+HTANLIYVDWNNKSQGLWMQDFPWKDQN
Sbjct: 247 WILHKPPLPISFGTHHSKAMFLVYPRGVRVIIHTANLIYVDWNNKSQGLWMQDFPWKDQN 306

Query: 182 SLTKGSGFENDLVEYLSMLKWPEFSVKLPSLGNFSICPSFFKKFDYSDAMVRLIASVPGY 361
           S +KGS FENDLVEYLS LKWPEFSV LPSLGNFSICPSFFKKFDYSDAMVRLIASVPGY
Sbjct: 307 SPSKGSRFENDLVEYLSALKWPEFSVNLPSLGNFSICPSFFKKFDYSDAMVRLIASVPGY 366

Query: 362 HSGPSLKKWGHMKLRSVLQECTFDEEFKKSPLVYQFSSLGSLDEKWMAELASSMSAGLSE 541
           HSG  LKKWGHMKLRSVLQECTFD+EFKKSPLVYQFSSLGSLDEKWM ELASSMSAGLSE
Sbjct: 367 HSGNGLKKWGHMKLRSVLQECTFDKEFKKSPLVYQFSSLGSLDEKWMVELASSMSAGLSE 426

Query: 542 DKVPLGMGEAQIIWPTVEDVRCSLE 616
           DKVPLGMGE QIIWPTVE+VRCS+E
Sbjct: 427 DKVPLGMGEPQIIWPTVEEVRCSIE 451


>ref|XP_002518536.1| tyrosyl-DNA phosphodiesterase, putative [Ricinus communis]
           gi|223542381|gb|EEF43923.1| tyrosyl-DNA
           phosphodiesterase, putative [Ricinus communis]
          Length = 665

 Score =  384 bits (987), Expect = e-105
 Identities = 177/211 (83%), Positives = 197/211 (93%)
 Frame = +2

Query: 2   WILHKPPLPISFGTHHSKSMLLVYPRGVRIIVHTANLIYVDWNNKSQGLWMQDFPWKDQN 181
           WILHKPPLPISFGTHHSK+MLLVYPRG+RIIVHTANLIYVDWNNK+QGLWMQDFPWKD+ 
Sbjct: 271 WILHKPPLPISFGTHHSKAMLLVYPRGMRIIVHTANLIYVDWNNKTQGLWMQDFPWKDEK 330

Query: 182 SLTKGSGFENDLVEYLSMLKWPEFSVKLPSLGNFSICPSFFKKFDYSDAMVRLIASVPGY 361
           S TKG GFENDLV+YL+ LKWPEF+VKLP+LG+F+I PSFFKKFDYS A VRLIASVPGY
Sbjct: 331 SQTKGCGFENDLVDYLNTLKWPEFTVKLPALGSFTINPSFFKKFDYSTAAVRLIASVPGY 390

Query: 362 HSGPSLKKWGHMKLRSVLQECTFDEEFKKSPLVYQFSSLGSLDEKWMAELASSMSAGLSE 541
           H+GP+LKKWGHMKLRSVLQECTF +EFK SPL YQFSSLGSLD KWM ELA+S+S+GLSE
Sbjct: 391 HTGPNLKKWGHMKLRSVLQECTFRKEFKNSPLAYQFSSLGSLDAKWMTELATSLSSGLSE 450

Query: 542 DKVPLGMGEAQIIWPTVEDVRCSLEGYAAGS 634
           D+ PLG+GE +IIWPTVEDVRCSLEGYAAG+
Sbjct: 451 DRTPLGLGEPRIIWPTVEDVRCSLEGYAAGN 481


>ref|XP_002305614.1| predicted protein [Populus trichocarpa] gi|222848578|gb|EEE86125.1|
           predicted protein [Populus trichocarpa]
          Length = 599

 Score =  373 bits (957), Expect = e-101
 Identities = 174/211 (82%), Positives = 191/211 (90%)
 Frame = +2

Query: 2   WILHKPPLPISFGTHHSKSMLLVYPRGVRIIVHTANLIYVDWNNKSQGLWMQDFPWKDQN 181
           WILHKP LPISFGTHHSK+M LVYPRGVR+IVHTANLIYVDWNNKSQGLWMQDFPWK++ 
Sbjct: 215 WILHKPRLPISFGTHHSKAMFLVYPRGVRVIVHTANLIYVDWNNKSQGLWMQDFPWKEEK 274

Query: 182 SLTKGSGFENDLVEYLSMLKWPEFSVKLPSLGNFSICPSFFKKFDYSDAMVRLIASVPGY 361
              KG GFENDLV+YLSMLKWPEF+VKLP+LG+ SI  SFFKKFDYS A VRLIASVPGY
Sbjct: 275 KPGKGCGFENDLVDYLSMLKWPEFTVKLPNLGSISINASFFKKFDYSHAAVRLIASVPGY 334

Query: 362 HSGPSLKKWGHMKLRSVLQECTFDEEFKKSPLVYQFSSLGSLDEKWMAELASSMSAGLSE 541
           H+G +L+KWGHMKL+SVLQECTFD EFK+SPLVYQFSSLGSLDEKWM ELA SMS+G +E
Sbjct: 335 HTGANLRKWGHMKLQSVLQECTFDNEFKRSPLVYQFSSLGSLDEKWMTELAISMSSGYAE 394

Query: 542 DKVPLGMGEAQIIWPTVEDVRCSLEGYAAGS 634
           DK PLG+G  QIIWPTVEDVRCSLEGYAAG+
Sbjct: 395 DKTPLGLGVPQIIWPTVEDVRCSLEGYAAGN 425


Top