BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00028617
         (300 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003619016.1| Pentatricopeptide repeat-containing protein ...   174   5e-42
ref|XP_003519954.1| PREDICTED: pentatricopeptide repeat-containi...   166   2e-39
ref|XP_003632713.1| PREDICTED: pentatricopeptide repeat-containi...   147   9e-34
ref|XP_002319164.1| predicted protein [Populus trichocarpa] gi|2...   145   3e-33
ref|XP_002525440.1| pentatricopeptide repeat-containing protein,...   137   7e-31

>ref|XP_003619016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355494031|gb|AES75234.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 999

 Score =  174 bits (442), Expect = 5e-42
 Identities = 85/99 (85%), Positives = 91/99 (91%)
 Frame = +2

Query: 2   LDLGRQIHTQSCVSGYSDDLSIGNALVSLYARCGKAREAYFAFDQIFAKDNRSWNSLISG 181
           LD GRQIH QSC+SGYSDDLSIGNALVSLYARCGK REAY AFDQI+AKDN SWNSL+SG
Sbjct: 555 LDQGRQIHAQSCLSGYSDDLSIGNALVSLYARCGKVREAYAAFDQIYAKDNVSWNSLVSG 614

Query: 182 LAQSGYCEEALNLFAQMNKTGLEINSFTFGSAVSAASNV 298
            AQSGY EEALN+FAQMNK GLEINSFTFGSAVSAA+N+
Sbjct: 615 FAQSGYFEEALNIFAQMNKAGLEINSFTFGSAVSAAANI 653



 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 35/98 (35%), Positives = 57/98 (58%)
 Frame = +2

Query: 5   DLGRQIHTQSCVSGYSDDLSIGNALVSLYARCGKAREAYFAFDQIFAKDNRSWNSLISGL 184
           DLG QIHTQ   +G+  ++ + + L+ +YA+ GK   A   F ++   D  SW ++I+G 
Sbjct: 455 DLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKHGKLDHALKIFRRLKENDVVSWTAMIAGY 514

Query: 185 AQSGYCEEALNLFAQMNKTGLEINSFTFGSAVSAASNV 298
            Q     EALNLF +M   G++ ++  F SA+SA + +
Sbjct: 515 TQHDKFTEALNLFKEMQDQGIKSDNIGFASAISACAGI 552



 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 39/98 (39%), Positives = 56/98 (57%)
 Frame = +2

Query: 5   DLGRQIHTQSCVSGYSDDLSIGNALVSLYARCGKAREAYFAFDQIFAKDNRSWNSLISGL 184
           + G+Q+H      G+S +  + NALV+LY+R G    A   F  +  +D  S+NSLISGL
Sbjct: 268 EFGKQLHGLVLKQGFSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQRDRVSYNSLISGL 327

Query: 185 AQSGYCEEALNLFAQMNKTGLEINSFTFGSAVSAASNV 298
           AQ GY   AL LF +MN    + +  T  S +SA ++V
Sbjct: 328 AQQGYINRALALFKKMNLDCQKPDCVTVASLLSACASV 365



 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 36/97 (37%), Positives = 52/97 (53%)
 Frame = +2

Query: 8   LGRQIHTQSCVSGYSDDLSIGNALVSLYARCGKAREAYFAFDQIFAKDNRSWNSLISGLA 187
           +G+QIH     +GY  +  + NAL++LYA+CG               D+ SWNS+I+G +
Sbjct: 658 IGKQIHGMIRKTGYDSETEVSNALITLYAKCGTI-------------DDISWNSMITGYS 704

Query: 188 QSGYCEEALNLFAQMNKTGLEINSFTFGSAVSAASNV 298
           Q G   EAL LF  M +  +  N  TF   +SA S+V
Sbjct: 705 QHGCGFEALKLFEDMKQLDVLPNHVTFVGVLSACSHV 741



 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 33/86 (38%), Positives = 51/86 (59%), Gaps = 1/86 (1%)
 Frame = +2

Query: 17  QIHTQSCVSGYSDDLSIGNALVSLYARCGKAREAYFAFDQIFAKDNRSWNSLISGLAQSG 196
           QIH ++  SG+     I N L+ LY + G    A   F+ + A+D+ SW ++ISGL+Q+G
Sbjct: 185 QIHAKTITSGFESSTFICNPLIDLYFKNGFLSSAKKVFENLKARDSVSWVAMISGLSQNG 244

Query: 197 YCEEALNLFAQMNKTG-LEINSFTFG 271
           Y EEA+ LF Q+  +   ++  F FG
Sbjct: 245 YEEEAMLLFCQIVLSACTKVEFFEFG 270


>ref|XP_003519954.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Glycine max]
          Length = 1047

 Score =  166 bits (419), Expect = 2e-39
 Identities = 79/99 (79%), Positives = 91/99 (91%)
 Frame = +2

Query: 2   LDLGRQIHTQSCVSGYSDDLSIGNALVSLYARCGKAREAYFAFDQIFAKDNRSWNSLISG 181
           L+ G+QIH Q+CVSGYSDDLS+GNALVSLYARCGK R+AYFAFD+IF+KDN SWNSLISG
Sbjct: 590 LNQGQQIHAQACVSGYSDDLSVGNALVSLYARCGKVRDAYFAFDKIFSKDNISWNSLISG 649

Query: 182 LAQSGYCEEALNLFAQMNKTGLEINSFTFGSAVSAASNV 298
            AQSG+CEEAL+LF+QM+K G EINSFTFG AVSAA+NV
Sbjct: 650 FAQSGHCEEALSLFSQMSKAGQEINSFTFGPAVSAAANV 688



 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 37/99 (37%), Positives = 59/99 (59%)
 Frame = +2

Query: 2   LDLGRQIHTQSCVSGYSDDLSIGNALVSLYARCGKAREAYFAFDQIFAKDNRSWNSLISG 181
           +DLG QIHTQ   +G+  ++ + + L+ +YA+ GK   A   F ++  KD  SW ++I+G
Sbjct: 489 VDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKLGKLDHALKIFRRLKEKDVVSWTAMIAG 548

Query: 182 LAQSGYCEEALNLFAQMNKTGLEINSFTFGSAVSAASNV 298
            AQ     EALNLF +M   G+  ++  F SA+SA + +
Sbjct: 549 YAQHEKFAEALNLFKEMQDQGIHSDNIGFASAISACAGI 587



 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 35/97 (36%), Positives = 59/97 (60%)
 Frame = +2

Query: 8   LGRQIHTQSCVSGYSDDLSIGNALVSLYARCGKAREAYFAFDQIFAKDNRSWNSLISGLA 187
           LG+QIH     +G+  +  + N L++LYA+CG   +A   F ++  K+  SWN++++G +
Sbjct: 693 LGKQIHAMIIKTGHDSETEVSNVLITLYAKCGNIDDAERQFFEMPEKNEISWNAMLTGYS 752

Query: 188 QSGYCEEALNLFAQMNKTGLEINSFTFGSAVSAASNV 298
           Q G+  +AL+LF  M + G+  N  TF   +SA S+V
Sbjct: 753 QHGHGFKALSLFEDMKQLGVLPNHVTFVGVLSACSHV 789



 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 35/94 (37%), Positives = 56/94 (59%)
 Frame = +2

Query: 17  QIHTQSCVSGYSDDLSIGNALVSLYARCGKAREAYFAFDQIFAKDNRSWNSLISGLAQSG 196
           +IH ++   GY + L + N L+ LY + G    A   FD +  +D+ SW +++SGL+QSG
Sbjct: 191 KIHARTITHGYENSLFVCNPLIDLYFKNGFLNSAKKVFDGLQKRDSVSWVAMLSGLSQSG 250

Query: 197 YCEEALNLFAQMNKTGLEINSFTFGSAVSAASNV 298
             EEA+ LF QM+ +G+    + F S +SA + V
Sbjct: 251 CEEEAVLLFCQMHTSGVYPTPYIFSSVLSACTKV 284



 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 39/97 (40%), Positives = 58/97 (59%)
 Frame = +2

Query: 8   LGRQIHTQSCVSGYSDDLSIGNALVSLYARCGKAREAYFAFDQIFAKDNRSWNSLISGLA 187
           +G Q+H      G+S +  + NALV+LY+R G    A   F+ +  +D  S+NSLISGL+
Sbjct: 289 VGEQLHGLVLKQGFSLETYVCNALVTLYSRLGNFIPAEQVFNAMLQRDEVSYNSLISGLS 348

Query: 188 QSGYCEEALNLFAQMNKTGLEINSFTFGSAVSAASNV 298
           Q GY ++AL LF +M    L+ +  T  S +SA S+V
Sbjct: 349 QQGYSDKALELFKKMCLDCLKPDCVTVASLLSACSSV 385


>ref|XP_003632713.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Vitis vinifera]
          Length = 989

 Score =  147 bits (371), Expect = 9e-34
 Identities = 70/98 (71%), Positives = 86/98 (87%)
 Frame = +2

Query: 2   LDLGRQIHTQSCVSGYSDDLSIGNALVSLYARCGKAREAYFAFDQIFAKDNRSWNSLISG 181
           L+ G+QIH QS +SGYS+DLSIGNALVSLYARCG+A++AY AF++I AKDN SWN+LISG
Sbjct: 532 LNQGQQIHAQSYISGYSEDLSIGNALVSLYARCGRAQDAYLAFEKIDAKDNISWNALISG 591

Query: 182 LAQSGYCEEALNLFAQMNKTGLEINSFTFGSAVSAASN 295
            AQSG+CEEAL +F+QMN+ G+E N FTFGSAVSA +N
Sbjct: 592 FAQSGHCEEALQVFSQMNQAGVEANLFTFGSAVSATAN 629



 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 37/96 (38%), Positives = 58/96 (60%)
 Frame = +2

Query: 11  GRQIHTQSCVSGYSDDLSIGNALVSLYARCGKAREAYFAFDQIFAKDNRSWNSLISGLAQ 190
           G+QIH     +GY  +    N L++LY++CG   +A   F ++  K+  SWN++I+G +Q
Sbjct: 636 GKQIHAMMIKTGYDSETEASNVLITLYSKCGSIEDAKREFFEMPEKNVVSWNAMITGYSQ 695

Query: 191 SGYCEEALNLFAQMNKTGLEINSFTFGSAVSAASNV 298
            GY  EA++LF +M + GL  N  TF   +SA S+V
Sbjct: 696 HGYGSEAVSLFEEMKQLGLMPNHVTFVGVLSACSHV 731



 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 34/99 (34%), Positives = 56/99 (56%)
 Frame = +2

Query: 2   LDLGRQIHTQSCVSGYSDDLSIGNALVSLYARCGKAREAYFAFDQIFAKDNRSWNSLISG 181
           LDLG QIHTQ   SG+  ++ + + L+ +YA+ G+   A     ++  +D  SW ++I+G
Sbjct: 431 LDLGEQIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQRLREEDVVSWTAMIAG 490

Query: 182 LAQSGYCEEALNLFAQMNKTGLEINSFTFGSAVSAASNV 298
             Q     EAL LF +M   G+  ++  F SA+SA + +
Sbjct: 491 YTQHDLFAEALKLFQEMENQGIRSDNIGFSSAISACAGI 529



 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 33/94 (35%), Positives = 56/94 (59%)
 Frame = +2

Query: 17  QIHTQSCVSGYSDDLSIGNALVSLYARCGKAREAYFAFDQIFAKDNRSWNSLISGLAQSG 196
           QIH +    G+     + N L+ LY++ G    A   F+++F KD+ SW ++ISGL+Q+G
Sbjct: 133 QIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVSWVAMISGLSQNG 192

Query: 197 YCEEALNLFAQMNKTGLEINSFTFGSAVSAASNV 298
             +EA+ LF QM+K+ +    + F S +SA + +
Sbjct: 193 REDEAILLFCQMHKSAVIPTPYVFSSVLSACTKI 226



 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 38/97 (39%), Positives = 56/97 (57%)
 Frame = +2

Query: 8   LGRQIHTQSCVSGYSDDLSIGNALVSLYARCGKAREAYFAFDQIFAKDNRSWNSLISGLA 187
           LG Q+H      G S +  + NALV+LY+R G    A   F ++  +D  S+NSLISGLA
Sbjct: 231 LGEQLHGFIVKWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLA 290

Query: 188 QSGYCEEALNLFAQMNKTGLEINSFTFGSAVSAASNV 298
           Q G+ + AL LF +M    ++ +  T  S +SA ++V
Sbjct: 291 QRGFSDRALQLFEKMQLDCMKPDCVTVASLLSACASV 327


>ref|XP_002319164.1| predicted protein [Populus trichocarpa] gi|222857540|gb|EEE95087.1|
           predicted protein [Populus trichocarpa]
          Length = 989

 Score =  145 bits (367), Expect = 3e-33
 Identities = 71/99 (71%), Positives = 84/99 (84%)
 Frame = +2

Query: 2   LDLGRQIHTQSCVSGYSDDLSIGNALVSLYARCGKAREAYFAFDQIFAKDNRSWNSLISG 181
           L+ GRQIH QS VSGYS+DLSIGNALVSLYARCG+ +EAY  F++I AKD+ SWN LISG
Sbjct: 532 LNQGRQIHAQSYVSGYSEDLSIGNALVSLYARCGRIKEAYLEFEKIDAKDSISWNGLISG 591

Query: 182 LAQSGYCEEALNLFAQMNKTGLEINSFTFGSAVSAASNV 298
            AQSGYCE+AL +FAQMN+  LE + FTFGSAVSAA+N+
Sbjct: 592 FAQSGYCEDALKVFAQMNRAKLEASFFTFGSAVSAAANI 630



 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 38/96 (39%), Positives = 59/96 (61%)
 Frame = +2

Query: 11  GRQIHTQSCVSGYSDDLSIGNALVSLYARCGKAREAYFAFDQIFAKDNRSWNSLISGLAQ 190
           G+QIH      G+  D+ + NAL++ YA+CG   +A   F ++  K++ SWN++I+G +Q
Sbjct: 636 GKQIHAMIIKRGFDSDIEVSNALITFYAKCGSIEDARREFCEMPEKNDVSWNAMITGYSQ 695

Query: 191 SGYCEEALNLFAQMNKTGLEINSFTFGSAVSAASNV 298
            GY  EA+NLF +M + G   N  TF   +SA S+V
Sbjct: 696 HGYGNEAVNLFEKMKQVGEMPNHVTFVGVLSACSHV 731



 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 36/99 (36%), Positives = 56/99 (56%)
 Frame = +2

Query: 2   LDLGRQIHTQSCVSGYSDDLSIGNALVSLYARCGKAREAYFAFDQIFAKDNRSWNSLISG 181
           LDLG QIHTQ   +G+  ++ + + L+ +YA+ GK   A+     +   D  SW +LISG
Sbjct: 431 LDLGEQIHTQVIKTGFQFNVYVCSVLIDMYAKHGKLDTAHVILRTLTEDDVVSWTALISG 490

Query: 182 LAQSGYCEEALNLFAQMNKTGLEINSFTFGSAVSAASNV 298
            AQ     EAL  F +M   G++ ++  F SA+SA + +
Sbjct: 491 YAQHNLFAEALKHFKEMLNRGIQSDNIGFSSAISACAGI 529



 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 34/94 (36%), Positives = 52/94 (55%)
 Frame = +2

Query: 17  QIHTQSCVSGYSDDLSIGNALVSLYARCGKAREAYFAFDQIFAKDNRSWNSLISGLAQSG 196
           QIH +    G      I N L+ LYA+ G    A   FD +  KD+ SW ++ISG +Q+G
Sbjct: 133 QIHARIICHGLLCSPIISNPLIGLYAKNGLIISARKVFDNLCTKDSVSWVAMISGFSQNG 192

Query: 197 YCEEALNLFAQMNKTGLEINSFTFGSAVSAASNV 298
           Y EEA++LF +M+  G+    + F S +S  + +
Sbjct: 193 YEEEAIHLFCEMHTAGIFPTPYVFSSVLSGCTKI 226



 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 38/97 (39%), Positives = 57/97 (58%)
 Frame = +2

Query: 5   DLGRQIHTQSCVSGYSDDLSIGNALVSLYARCGKAREAYFAFDQIFAKDNRSWNSLISGL 184
           D+G Q+H      G S +  + NALV+LY+R      A   F ++ +KD  S+NSLISGL
Sbjct: 230 DVGEQLHALVFKYGSSLETYVCNALVTLYSRMPNFVSAEKVFSKMQSKDEVSFNSLISGL 289

Query: 185 AQSGYCEEALNLFAQMNKTGLEINSFTFGSAVSAASN 295
           AQ G+ + AL LF +M +  L+ +  T  S +SA ++
Sbjct: 290 AQQGFSDGALELFTKMKRDYLKPDCVTVASLLSACAS 326


>ref|XP_002525440.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223535253|gb|EEF36930.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 878

 Score =  137 bits (346), Expect = 7e-31
 Identities = 66/99 (66%), Positives = 83/99 (83%)
 Frame = +2

Query: 2   LDLGRQIHTQSCVSGYSDDLSIGNALVSLYARCGKAREAYFAFDQIFAKDNRSWNSLISG 181
           L  G+QIH QS +SGYS+DLSIGNALVSLYARCG+ +EA  AF++I AKD+ SWN+L+SG
Sbjct: 609 LSQGQQIHAQSYISGYSEDLSIGNALVSLYARCGRIQEANLAFEKIDAKDSISWNALMSG 668

Query: 182 LAQSGYCEEALNLFAQMNKTGLEINSFTFGSAVSAASNV 298
            AQSGYCEEAL +FAQM +  ++ + FTFGSAVSAA+N+
Sbjct: 669 FAQSGYCEEALKIFAQMTRANIKASLFTFGSAVSAAANM 707



 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 38/96 (39%), Positives = 59/96 (61%)
 Frame = +2

Query: 11   GRQIHTQSCVSGYSDDLSIGNALVSLYARCGKAREAYFAFDQIFAKDNRSWNSLISGLAQ 190
            G+QIH     +G+  ++ + NAL++LYA+CG    A   F +I  K+  SWN++I+G +Q
Sbjct: 713  GKQIHAMIMKTGFDSEIEVSNALITLYAKCGCIDGAKREFFEIPEKNEISWNAMITGYSQ 772

Query: 191  SGYCEEALNLFAQMNKTGLEINSFTFGSAVSAASNV 298
             G   EA+NLF +M + G + N  TF   +SA S+V
Sbjct: 773  HGCGIEAVNLFQKMKQVGAKPNHVTFVGVISACSHV 808



 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 35/99 (35%), Positives = 59/99 (59%)
 Frame = +2

Query: 2   LDLGRQIHTQSCVSGYSDDLSIGNALVSLYARCGKAREAYFAFDQIFAKDNRSWNSLISG 181
           LDLG QIH+Q+  +G+  ++ + + L+ +YA+ GK   A     ++  +D  SW +LI+G
Sbjct: 508 LDLGEQIHSQAIKTGFEFNVYVCSVLIDMYAKLGKLDIARGILRRLNEEDVVSWTALIAG 567

Query: 182 LAQSGYCEEALNLFAQMNKTGLEINSFTFGSAVSAASNV 298
             Q     EALNLF +M   G++ ++  F SA+SA + +
Sbjct: 568 YTQHDLFTEALNLFDEMLNRGIQSDNIGFSSAISACAGI 606



 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 38/98 (38%), Positives = 56/98 (57%)
 Frame = +2

Query: 5   DLGRQIHTQSCVSGYSDDLSIGNALVSLYARCGKAREAYFAFDQIFAKDNRSWNSLISGL 184
           D+G Q+H      G+  +  + NALV+LY+R G    A   F +I  KD  S+NSLISGL
Sbjct: 307 DIGEQLHALVFKCGFFLETYVCNALVTLYSRLGNFISAQQVFSKIKCKDEVSYNSLISGL 366

Query: 185 AQSGYCEEALNLFAQMNKTGLEINSFTFGSAVSAASNV 298
           +Q G  + AL LF +M    L+ +  T  S +SA +++
Sbjct: 367 SQQGCSDRALELFKKMQLDHLKPDCVTVASLLSACASI 404



 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 34/94 (36%), Positives = 52/94 (55%)
 Frame = +2

Query: 17  QIHTQSCVSGYSDDLSIGNALVSLYARCGKAREAYFAFDQIFAKDNRSWNSLISGLAQSG 196
           QIH      G        N L+ LYA+ G  R A   FD++  KD+ SW ++IS  +Q+G
Sbjct: 210 QIHASIISRGLGTSSIACNPLIDLYAKNGFIRSARKVFDELCMKDSVSWVAVISSYSQNG 269

Query: 197 YCEEALNLFAQMNKTGLEINSFTFGSAVSAASNV 298
           + EEA+ LF +M+ +GL    + F S +SA + +
Sbjct: 270 FGEEAIRLFCEMHISGLSPTPYVFSSVLSACAKI 303