BLASTX nr result

ID: Glycyrrhiza23_contig00028616 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00028616
         (236 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003596842.1| Capsanthin/capsorubin synthase, chromoplast ...   131   7e-29
ref|XP_003541965.1| PREDICTED: capsanthin/capsorubin synthase, c...   129   2e-28
ref|XP_003596845.1| Lycopene beta-cyclase [Medicago truncatula] ...   121   5e-26
gb|ACJ66628.1| lycopene beta-cyclase [Actinidia chinensis]            111   7e-23
dbj|BAM66327.1| LCYb2, partial [Citrus unshiu]                        109   3e-22

>ref|XP_003596842.1| Capsanthin/capsorubin synthase, chromoplast [Medicago truncatula]
           gi|355485890|gb|AES67093.1| Capsanthin/capsorubin
           synthase, chromoplast [Medicago truncatula]
          Length = 502

 Score =  131 bits (329), Expect = 7e-29
 Identities = 61/78 (78%), Positives = 68/78 (87%)
 Frame = -1

Query: 236 SPPTSRKLRGRVHSTTKFGNFLDLKPEYQPEHLDFDLPWCHPSDRSRFDVIIIGAGPAGI 57
           S P+SRK    ++ST KFGNFLDLK EYQPE LDFDLPW HPSDRS+FDVII+GAGPAGI
Sbjct: 34  SLPSSRKTNTMINSTKKFGNFLDLKSEYQPEALDFDLPWHHPSDRSQFDVIIVGAGPAGI 93

Query: 56  RLSQQVSRYGIKVCCVDP 3
           RL++QVS YGIKVCCVDP
Sbjct: 94  RLAEQVSLYGIKVCCVDP 111


>ref|XP_003541965.1| PREDICTED: capsanthin/capsorubin synthase, chromoplast-like
           [Glycine max]
          Length = 493

 Score =  129 bits (325), Expect = 2e-28
 Identities = 57/68 (83%), Positives = 63/68 (92%)
 Frame = -1

Query: 206 RVHSTTKFGNFLDLKPEYQPEHLDFDLPWCHPSDRSRFDVIIIGAGPAGIRLSQQVSRYG 27
           RVHST+KFGNFLD KPE +PE LDFDLPWCHPSDR+RFDVIIIGAGPAG RL++QVS YG
Sbjct: 39  RVHSTSKFGNFLDFKPENKPESLDFDLPWCHPSDRNRFDVIIIGAGPAGTRLAEQVSLYG 98

Query: 26  IKVCCVDP 3
           +KVCCVDP
Sbjct: 99  VKVCCVDP 106


>ref|XP_003596845.1| Lycopene beta-cyclase [Medicago truncatula]
           gi|355485893|gb|AES67096.1| Lycopene beta-cyclase
           [Medicago truncatula]
          Length = 490

 Score =  121 bits (304), Expect = 5e-26
 Identities = 59/79 (74%), Positives = 68/79 (86%), Gaps = 1/79 (1%)
 Frame = -1

Query: 236 SPPTSRKL-RGRVHSTTKFGNFLDLKPEYQPEHLDFDLPWCHPSDRSRFDVIIIGAGPAG 60
           S P+SRK  +GR+H+T KFGNFLDLK EYQPE LDFDLP  HPSD + F+VIIIGAGPAG
Sbjct: 29  SLPSSRKQHQGRIHNTRKFGNFLDLKSEYQPEALDFDLPLFHPSDHTCFNVIIIGAGPAG 88

Query: 59  IRLSQQVSRYGIKVCCVDP 3
           IRL++QVS YG+KVCCVDP
Sbjct: 89  IRLAEQVSLYGMKVCCVDP 107


>gb|ACJ66628.1| lycopene beta-cyclase [Actinidia chinensis]
          Length = 493

 Score =  111 bits (277), Expect = 7e-23
 Identities = 53/75 (70%), Positives = 61/75 (81%)
 Frame = -1

Query: 227 TSRKLRGRVHSTTKFGNFLDLKPEYQPEHLDFDLPWCHPSDRSRFDVIIIGAGPAGIRLS 48
           T RK   ++H + KFGNFLDLKP  +PE LDFDL W  PS RSRFDVIIIG GPAG+RL+
Sbjct: 34  TPRKKHHKIHCS-KFGNFLDLKPISKPESLDFDLSWVDPSGRSRFDVIIIGTGPAGLRLA 92

Query: 47  QQVSRYGIKVCCVDP 3
           ++VSRYGIKVCCVDP
Sbjct: 93  ERVSRYGIKVCCVDP 107


>dbj|BAM66327.1| LCYb2, partial [Citrus unshiu]
          Length = 478

 Score =  109 bits (272), Expect = 3e-22
 Identities = 56/78 (71%), Positives = 64/78 (82%), Gaps = 4/78 (5%)
 Frame = -1

Query: 224 SRKLRGRVHS---TTKFGNFLDLKPEYQPEHLDFDLPWCHPSDRSRFDVIIIGAGPAGIR 54
           SRK  GR H    T+KFGNFL+L PE +PE LDFDLPW HPSDR R+DVIIIG GPAG+R
Sbjct: 28  SRKA-GRHHRRIRTSKFGNFLELTPESEPELLDFDLPWFHPSDRIRYDVIIIGTGPAGLR 86

Query: 53  LSQQV-SRYGIKVCCVDP 3
           L++QV SR+GIKVCCVDP
Sbjct: 87  LAEQVSSRHGIKVCCVDP 104


Top