BLASTX nr result

ID: Glycyrrhiza23_contig00028613 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00028613
         (658 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK39831.1| unknown [Lotus japonicus]                              233   2e-59
gb|AFK44423.1| unknown [Lotus japonicus]                              233   3e-59
ref|XP_003619792.1| Plastid DNA-binding protein [Medicago trunca...   207   2e-51
ref|XP_002331419.1| predicted protein [Populus trichocarpa] gi|2...   120   2e-25
ref|XP_003633998.1| PREDICTED: uncharacterized protein LOC100855...   113   4e-23

>gb|AFK39831.1| unknown [Lotus japonicus]
          Length = 209

 Score =  233 bits (594), Expect = 2e-59
 Identities = 125/182 (68%), Positives = 152/182 (83%), Gaps = 3/182 (1%)
 Frame = -3

Query: 539 MRKKLLISSALSFRSS---TPKLINHLSCEVCDSVGSSNVRWRRGWSYAAAASAPSEIPD 369
           M+KKL I++ LSFRS    TPK  NHLS EVCDSVG SNV+WR G SYAAA+SAPSE P+
Sbjct: 1   MQKKLQIAT-LSFRSIRFLTPKP-NHLSFEVCDSVGPSNVKWR-GLSYAAASSAPSEPPE 57

Query: 368 DRKSRKRVPKHERRAMVESFVNKYRSENAGKFPKITDIKKQVGGGFYVLREIVQELEYKS 189
            +K RKRV K +RRA+VESFVNK+RSENAGKFP ITDI+KQVGGGFY +REI++ELEYKS
Sbjct: 58  SQKGRKRVSKQQRRAIVESFVNKHRSENAGKFPTITDIQKQVGGGFYSIREIIKELEYKS 117

Query: 188 KMKSSNSMDEILVEKLFDEGELKTTESVNVSSGNIETAKDRPIQDESRSVLLDDKETINA 9
           KMKSSN+ DEIL+EKL D+ + +TTESV VSS NIET++++P QD+S  VL+D KET++ 
Sbjct: 118 KMKSSNNKDEILLEKLIDKSKRETTESVIVSSDNIETSREKPFQDDSLPVLIDGKETVST 177

Query: 8   GY 3
           GY
Sbjct: 178 GY 179


>gb|AFK44423.1| unknown [Lotus japonicus]
          Length = 217

 Score =  233 bits (593), Expect = 3e-59
 Identities = 125/182 (68%), Positives = 152/182 (83%), Gaps = 3/182 (1%)
 Frame = -3

Query: 539 MRKKLLISSALSFRSS---TPKLINHLSCEVCDSVGSSNVRWRRGWSYAAAASAPSEIPD 369
           M+KKL I++ LSFRS    TPK  NHLS EVCDSVG SNV+WR G SYAAA+SAPSE P+
Sbjct: 1   MQKKLQIAT-LSFRSIRFLTPKP-NHLSFEVCDSVGPSNVKWR-GLSYAAASSAPSEPPE 57

Query: 368 DRKSRKRVPKHERRAMVESFVNKYRSENAGKFPKITDIKKQVGGGFYVLREIVQELEYKS 189
            +K RKRV K +RRA+VESFVNK+RSENAGKFP ITDI+KQVGGGFY +REI++ELEYKS
Sbjct: 58  SQKGRKRVSKQQRRAIVESFVNKHRSENAGKFPTITDIQKQVGGGFYSIREIIKELEYKS 117

Query: 188 KMKSSNSMDEILVEKLFDEGELKTTESVNVSSGNIETAKDRPIQDESRSVLLDDKETINA 9
           KMKSSN+ DEIL+EKL D+ + +TTESV VSS NIET++++P QD+S  VL+D KET++ 
Sbjct: 118 KMKSSNNEDEILLEKLIDKSKRETTESVIVSSDNIETSREKPFQDDSLPVLIDGKETVST 177

Query: 8   GY 3
           GY
Sbjct: 178 GY 179


>ref|XP_003619792.1| Plastid DNA-binding protein [Medicago truncatula]
           gi|355494807|gb|AES76010.1| Plastid DNA-binding protein
           [Medicago truncatula]
          Length = 378

 Score =  207 bits (526), Expect = 2e-51
 Identities = 120/183 (65%), Positives = 140/183 (76%), Gaps = 7/183 (3%)
 Frame = -3

Query: 539 MRKKLLI--SSALSFRSSTPKLINHLSCEVCDSVGSSNVRWRRGWSYAAAASA---PSEI 375
           MRKKLLI  SS     + TPK  NHLS E     GSS ++WR GWS+AAAA+A   PSE 
Sbjct: 1   MRKKLLITLSSFRKIHNFTPKS-NHLSFEG----GSSKLQWR-GWSHAAAAAAACVPSET 54

Query: 374 PD--DRKSRKRVPKHERRAMVESFVNKYRSENAGKFPKITDIKKQVGGGFYVLREIVQEL 201
            D   RK+  RV KHERRAMVESFVNKY+SENAGKFP I   +K+VGG +Y +R+I+QEL
Sbjct: 55  EDIRPRKNGSRVSKHERRAMVESFVNKYKSENAGKFPAIKYTQKEVGGSYYTVRDIIQEL 114

Query: 200 EYKSKMKSSNSMDEILVEKLFDEGELKTTESVNVSSGNIETAKDRPIQDESRSVLLDDKE 21
           +YKSK+KS NS DEILVEK+ DE +LKT ESVNVSS NIETAKDRPIQ +S+SVLLDDKE
Sbjct: 115 KYKSKVKSLNSTDEILVEKVLDESKLKTAESVNVSSENIETAKDRPIQKDSQSVLLDDKE 174

Query: 20  TIN 12
            +N
Sbjct: 175 AVN 177


>ref|XP_002331419.1| predicted protein [Populus trichocarpa] gi|222873633|gb|EEF10764.1|
           predicted protein [Populus trichocarpa]
          Length = 192

 Score =  120 bits (302), Expect = 2e-25
 Identities = 70/158 (44%), Positives = 101/158 (63%)
 Frame = -3

Query: 500 RSSTPKLINHLSCEVCDSVGSSNVRWRRGWSYAAAASAPSEIPDDRKSRKRVPKHERRAM 321
           R S    I+ +  EV +++  +N++WR   + + AAS PS +P   K++KRV K +RRAM
Sbjct: 8   RGSARSTISTVFDEVANAIHGANMQWR---ARSYAASVPSHMPQSHKAQKRVSKDDRRAM 64

Query: 320 VESFVNKYRSENAGKFPKITDIKKQVGGGFYVLREIVQELEYKSKMKSSNSMDEILVEKL 141
           VES+VNKYR  +AGKFP I+D +KQVGG +Y +R+IVQELEYKSK+ SSNS ++     +
Sbjct: 65  VESYVNKYRETHAGKFPSISDARKQVGGNYYFIRKIVQELEYKSKISSSNSGNKKKELPI 124

Query: 140 FDEGELKTTESVNVSSGNIETAKDRPIQDESRSVLLDD 27
             E  +K     N+S+G      D   Q + R+V L+D
Sbjct: 125 VSEPLVKVK---NMSTGG--AMSDMRTQCDPRAVPLND 157


>ref|XP_003633998.1| PREDICTED: uncharacterized protein LOC100855088 [Vitis vinifera]
          Length = 381

 Score =  113 bits (282), Expect = 4e-23
 Identities = 74/178 (41%), Positives = 104/178 (58%), Gaps = 1/178 (0%)
 Frame = -3

Query: 539 MRKKLLIS-SALSFRSSTPKLINHLSCEVCDSVGSSNVRWRRGWSYAAAASAPSEIPDDR 363
           MR K L S S LS  S   +  + +  E+ + V  SN+R R G SYA   S PS +   +
Sbjct: 1   MRLKALTSLSKLSAPSHPLQASSDVYAEIINVVHKSNIR-RHGRSYAV--SVPSYVVKAQ 57

Query: 362 KSRKRVPKHERRAMVESFVNKYRSENAGKFPKITDIKKQVGGGFYVLREIVQELEYKSKM 183
           KSRKRVPK ER+ MVESFVNKYR  NAGKFP +++ +K VGG +Y++RE+VQELE+K+K 
Sbjct: 58  KSRKRVPKDERKVMVESFVNKYRGMNAGKFPTVSEAQKHVGGSYYIVRELVQELEHKAKT 117

Query: 182 KSSNSMDEILVEKLFDEGELKTTESVNVSSGNIETAKDRPIQDESRSVLLDDKETINA 9
              +  +E L+E    +      E+  VS+       D  I+D  ++V +   E  +A
Sbjct: 118 SPLSRRNENLMENEPAKERKSLAEAEKVSTS--RRTVDAVIEDYRQTVPISPLEASDA 173


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