BLASTX nr result

ID: Glycyrrhiza23_contig00028608 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00028608
         (445 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001237342.1| WRKY40 [Glycine max] gi|83630931|gb|ABC26914...    89   3e-16
gb|ACU14983.1| unknown [Glycine max]                                   89   5e-16
ref|XP_003524285.1| PREDICTED: LOW QUALITY PROTEIN: probable WRK...    82   4e-14
ref|XP_003630131.1| WRKY transcription factor [Medicago truncatu...    81   1e-13
ref|XP_003526838.1| PREDICTED: probable WRKY transcription facto...    60   2e-07

>ref|NP_001237342.1| WRKY40 [Glycine max] gi|83630931|gb|ABC26914.1| WRKY40 [Glycine
           max]
          Length = 235

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 74/147 (50%), Positives = 86/147 (58%), Gaps = 2/147 (1%)
 Frame = -3

Query: 440 DQQNQIMPNMQIGGFNDIPFPTNLMTFPPLGCNNNNQPLKAFSSMASPSLASAESDSTSN 261
           D+Q+QI   M   GF    FPTNL TFPPLGC+ ++  LKAFSS+A  SLA ++ DS SN
Sbjct: 15  DEQDQIPTQM---GF--FSFPTNL-TFPPLGCHQSS--LKAFSSIAPSSLAISQLDSASN 66

Query: 260 XXXXXXXXXXXXTDHQKSISSEYLTSSFGGTHHQFLSLHRSSLNPWALG--SDCFMSSSK 87
                          QKS   E LTSSFGG   QFLSLHRSS+NPWALG  ++CF  SSK
Sbjct: 67  LTAETLFSTTA----QKS--REDLTSSFGGG--QFLSLHRSSVNPWALGEVAECF--SSK 116

Query: 86  RCXXXXXXXXXXXXXXXISAMKMKKMK 6
           R                ISAMKMKK+K
Sbjct: 117 R-------SGFDDHHFRISAMKMKKIK 136


>gb|ACU14983.1| unknown [Glycine max]
          Length = 235

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 73/147 (49%), Positives = 86/147 (58%), Gaps = 2/147 (1%)
 Frame = -3

Query: 440 DQQNQIMPNMQIGGFNDIPFPTNLMTFPPLGCNNNNQPLKAFSSMASPSLASAESDSTSN 261
           D+Q+QI   M   GF    FPTNL TFPPLGC+ ++  LKAFSS+A  SLA ++ DS SN
Sbjct: 15  DEQDQIPTQM---GF--FSFPTNL-TFPPLGCHQSS--LKAFSSIAPSSLAISQQDSASN 66

Query: 260 XXXXXXXXXXXXTDHQKSISSEYLTSSFGGTHHQFLSLHRSSLNPWALG--SDCFMSSSK 87
                          QKS   E LTSSFGG   QFLSLHRSS+NPWALG  ++CF  SSK
Sbjct: 67  LTAETLFSTTA----QKS--REDLTSSFGGG--QFLSLHRSSVNPWALGEVAECF--SSK 116

Query: 86  RCXXXXXXXXXXXXXXXISAMKMKKMK 6
           R                ISAMKMKK++
Sbjct: 117 R-------SGFDDHHFRISAMKMKKIE 136


>ref|XP_003524285.1| PREDICTED: LOW QUALITY PROTEIN: probable WRKY transcription factor
           13-like [Glycine max]
          Length = 240

 Score = 82.4 bits (202), Expect = 4e-14
 Identities = 74/148 (50%), Positives = 86/148 (58%), Gaps = 3/148 (2%)
 Frame = -3

Query: 440 DQQNQIMPNMQIGGFNDIPFPTNLMTFPPLGCNNNNQPLKAFSSMA-SPSLASAESDSTS 264
           ++Q+Q MP  QIG F   PFPTNL TFPPLGC+ ++  LKAFSS+A S SL  ++ DS S
Sbjct: 15  EEQDQ-MPT-QIGFF---PFPTNL-TFPPLGCHQSS--LKAFSSIAPSSSLVISQQDSVS 66

Query: 263 NXXXXXXXXXXXXTDHQKSISSEYLTSSFGGTHHQFLSLHRSSLNPWALG--SDCFMSSS 90
           N               QKS   E LTSSF G   QFLSLHR S+NPWALG  +DCF  SS
Sbjct: 67  NLTAETLFSTTA----QKS--REDLTSSFRGA--QFLSLHRLSVNPWALGEVADCF--SS 116

Query: 89  KRCXXXXXXXXXXXXXXXISAMKMKKMK 6
           KR                ISA KMKK+K
Sbjct: 117 KR-------SGIDDHHLEISATKMKKIK 137


>ref|XP_003630131.1| WRKY transcription factor [Medicago truncatula]
           gi|355524153|gb|AET04607.1| WRKY transcription factor
           [Medicago truncatula]
          Length = 215

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 69/134 (51%), Positives = 76/134 (56%), Gaps = 5/134 (3%)
 Frame = -3

Query: 389 IPFPTNLMTFPPLGCNNNNQPLKAFSSMASPSLASAESDSTSNXXXXXXXXXXXXTDHQK 210
           IPFPTNL TFP L CN   Q LKAFSS+AS SL S ESDSTSN             + QK
Sbjct: 4   IPFPTNL-TFPSLDCN---QSLKAFSSIAS-SLTS-ESDSTSNLTQTLLTT-----NPQK 52

Query: 209 SISSEYLTSSFGGTHHQFLSLHRSSLNPWA-LG----SDCFMSSSKRCXXXXXXXXXXXX 45
           S   EYLTSSFGG+   FLSLH S +NPWA LG    S+C  +S KR             
Sbjct: 53  S--KEYLTSSFGGST-PFLSLHGSIVNPWAILGGEVISNCMNNSGKR----NGVDHRDNH 105

Query: 44  XXXISAMKMKKMKG 3
               + MKMKKMKG
Sbjct: 106 LGVSTTMKMKKMKG 119


>ref|XP_003526838.1| PREDICTED: probable WRKY transcription factor 13-like [Glycine max]
          Length = 235

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 54/147 (36%), Positives = 71/147 (48%), Gaps = 2/147 (1%)
 Frame = -3

Query: 440 DQQNQIMPNMQIGGFNDIPFPTNLMTFPPLGCNNNNQPLKAFSSMASPSLASAESDSTSN 261
           ++Q+QI    Q+G FN IPFP N  T+PPLGC      LK+ S++A PSL+SA + S + 
Sbjct: 12  EEQDQIPT--QMGLFNIIPFPPN-QTYPPLGCQTVT--LKSISAIA-PSLSSAANFSETL 65

Query: 260 XXXXXXXXXXXXTDHQKSISSEYLTSSFGGTHHQFLSLHRSSLNPWALG--SDCFMSSSK 87
                         +Q+    +  +S  GG   Q LSL RS +N WA    SDC M    
Sbjct: 66  LSTAV---------NQRPREEDLTSSLVGGGGGQLLSLSRSRVNSWAWEEVSDCLMGK-- 114

Query: 86  RCXXXXXXXXXXXXXXXISAMKMKKMK 6
                            +SAMKMKKMK
Sbjct: 115 ----RIGGDDNHHHHLGVSAMKMKKMK 137


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