BLASTX nr result

ID: Glycyrrhiza23_contig00028564 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00028564
         (354 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003516574.1| PREDICTED: nucleolar protein 6-like [Glycine...   179   2e-43
ref|XP_003612000.1| Nucleolar protein [Medicago truncatula] gi|3...   179   2e-43
ref|XP_003537588.1| PREDICTED: nucleolar protein 6-like [Glycine...   176   2e-42
emb|CBI17513.3| unnamed protein product [Vitis vinifera]              132   4e-29
ref|XP_002266705.1| PREDICTED: nucleolar protein 6-like [Vitis v...   132   4e-29

>ref|XP_003516574.1| PREDICTED: nucleolar protein 6-like [Glycine max]
          Length = 1055

 Score =  179 bits (454), Expect = 2e-43
 Identities = 84/102 (82%), Positives = 95/102 (93%), Gaps = 2/102 (1%)
 Frame = -2

Query: 353  LPKDLKGRPEELKNKLLVDFDPSRCFIRDLEEEFSTTFQVWHDSLGGDVIGLTWGKSYSS 174
            LPKDLKGRPEEL+NKLLVDFDPS+CFIRDL++EFSTTFQVWHD LGGDVIGLTWG+SY S
Sbjct: 952  LPKDLKGRPEELRNKLLVDFDPSKCFIRDLKQEFSTTFQVWHDYLGGDVIGLTWGESYPS 1011

Query: 173  KRKQEE--VVEEGYDPCKVLKTVGEVGKGFVRSIYFLKPPRL 54
            K+++ E  VVEE Y+PCKVLK VGEVGKGFV+SIYFLKPP+L
Sbjct: 1012 KKRKHEEVVVEEEYNPCKVLKAVGEVGKGFVKSIYFLKPPKL 1053


>ref|XP_003612000.1| Nucleolar protein [Medicago truncatula] gi|355513335|gb|AES94958.1|
            Nucleolar protein [Medicago truncatula]
          Length = 1048

 Score =  179 bits (454), Expect = 2e-43
 Identities = 90/104 (86%), Positives = 94/104 (90%), Gaps = 2/104 (1%)
 Frame = -2

Query: 353  LPKDLKGR-PEELKNKLLVDFDPSRCFIRDLEEEFSTTFQVWHDSLGGDVIGLTWGKSY- 180
            LPKDLKGR PEELKNKLLVDFDPSRCFI+DLE+EFST FQ+W DSLGGD IGLTW KSY 
Sbjct: 945  LPKDLKGRRPEELKNKLLVDFDPSRCFIKDLEKEFSTKFQLWRDSLGGDAIGLTWEKSYP 1004

Query: 179  SSKRKQEEVVEEGYDPCKVLKTVGEVGKGFVRSIYFLKPPRLTD 48
            S KRKQEEVVEEGYDP KVLK VGEVGKGFVRSIYFLKPPRL +
Sbjct: 1005 SKKRKQEEVVEEGYDPRKVLKAVGEVGKGFVRSIYFLKPPRLAN 1048


>ref|XP_003537588.1| PREDICTED: nucleolar protein 6-like [Glycine max]
          Length = 1050

 Score =  176 bits (445), Expect = 2e-42
 Identities = 86/101 (85%), Positives = 93/101 (92%), Gaps = 1/101 (0%)
 Frame = -2

Query: 353  LPKDLKGRPEELKNKLLVDFDPSRCFIRDLEEEFSTTFQVWHDSLGGDVIGLTWGKSY-S 177
            LPKDLKGRPEELKNKLLVDFDPS+CFIRDL++EFSTTFQVWHD LGGDVIGLTWG+SY S
Sbjct: 952  LPKDLKGRPEELKNKLLVDFDPSKCFIRDLKQEFSTTFQVWHDYLGGDVIGLTWGESYPS 1011

Query: 176  SKRKQEEVVEEGYDPCKVLKTVGEVGKGFVRSIYFLKPPRL 54
             KRK+E+VV    DPCKVLK VGEVGKGFVRSIYFLKPP+L
Sbjct: 1012 KKRKREDVV----DPCKVLKAVGEVGKGFVRSIYFLKPPKL 1048


>emb|CBI17513.3| unnamed protein product [Vitis vinifera]
          Length = 1066

 Score =  132 bits (331), Expect = 4e-29
 Identities = 64/100 (64%), Positives = 74/100 (74%)
 Frame = -2

Query: 353  LPKDLKGRPEELKNKLLVDFDPSRCFIRDLEEEFSTTFQVWHDSLGGDVIGLTWGKSYSS 174
            LP+ +KG   +LK+ LLVDFDP RCFI DLEEEF   F++W+DSLGGD IG+ W +S S 
Sbjct: 965  LPEHMKGNSPDLKDTLLVDFDPLRCFIGDLEEEFPNAFKLWYDSLGGDAIGMMWERSSSK 1024

Query: 173  KRKQEEVVEEGYDPCKVLKTVGEVGKGFVRSIYFLKPPRL 54
            KR + E  EE  DP  VLK VGEVGKGFVRSIY LK PRL
Sbjct: 1025 KRGRSEENEEEKDPVNVLKAVGEVGKGFVRSIYLLKSPRL 1064


>ref|XP_002266705.1| PREDICTED: nucleolar protein 6-like [Vitis vinifera]
          Length = 1057

 Score =  132 bits (331), Expect = 4e-29
 Identities = 64/100 (64%), Positives = 74/100 (74%)
 Frame = -2

Query: 353  LPKDLKGRPEELKNKLLVDFDPSRCFIRDLEEEFSTTFQVWHDSLGGDVIGLTWGKSYSS 174
            LP+ +KG   +LK+ LLVDFDP RCFI DLEEEF   F++W+DSLGGD IG+ W +S S 
Sbjct: 956  LPEHMKGNSPDLKDTLLVDFDPLRCFIGDLEEEFPNAFKLWYDSLGGDAIGMMWERSSSK 1015

Query: 173  KRKQEEVVEEGYDPCKVLKTVGEVGKGFVRSIYFLKPPRL 54
            KR + E  EE  DP  VLK VGEVGKGFVRSIY LK PRL
Sbjct: 1016 KRGRSEENEEEKDPVNVLKAVGEVGKGFVRSIYLLKSPRL 1055


Top