BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00028559
         (414 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003522504.1| PREDICTED: pentatricopeptide repeat-containi...   208   3e-52
ref|XP_003528020.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   204   8e-51
ref|XP_002278530.1| PREDICTED: pentatricopeptide repeat-containi...   182   3e-44
ref|XP_002529510.1| pentatricopeptide repeat-containing protein,...   178   4e-43
ref|XP_002308024.1| predicted protein [Populus trichocarpa] gi|2...   175   3e-42

>ref|XP_003522504.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Glycine max]
          Length = 555

 Score =  208 bits (530), Expect = 3e-52
 Identities = 103/138 (74%), Positives = 118/138 (85%)
 Frame = -1

Query: 414 QLADSGVVPDIFTYNILINGFCKAGNINGAFKLFKDLQIKGLSPDYVTYGTLIDGLYRVD 235
           QLA SGV+PDI TYN+LINGFCKA NINGA KLFKD+Q KGLSP+ VTYGTLIDGL+RV 
Sbjct: 296 QLAGSGVMPDIVTYNVLINGFCKASNINGALKLFKDMQNKGLSPNPVTYGTLIDGLFRVG 355

Query: 234 REEDAFKIIEHMQKHAIEPNFTVYRTLMTWLCRKKKVSLACSLYLEYLKNLPGRDNDSIS 55
           REEDAFKI +HM KH  EP+F VYR LMTWLCRKK+VS A SLYLEYLKNL GR+++SI+
Sbjct: 356 REEDAFKIHKHMLKHGCEPSFEVYRALMTWLCRKKRVSQAFSLYLEYLKNLRGREDNSIN 415

Query: 54  DLKEYFVREKVEEAIRGL 1
            L+E FVR +VE+A RGL
Sbjct: 416 ALEECFVRGEVEQAFRGL 433



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 31/108 (28%), Positives = 52/108 (48%)
 Frame = -1

Query: 411 LADSGVVPDIFTYNILINGFCKAGNINGAFKLFKDLQIKGLSPDYVTYGTLIDGLYRVDR 232
           + + G  PD+  Y++LING+CK G +  A    + L+  GL+     Y +LI G +   R
Sbjct: 39  MKERGFQPDLICYSVLINGYCKLGRLEEAISFLRLLERDGLALGIKGYSSLIAGFFSARR 98

Query: 231 EEDAFKIIEHMQKHAIEPNFTVYRTLMTWLCRKKKVSLACSLYLEYLK 88
             +A      M K  I P+  +Y  L+  L  + +V  A  +  E ++
Sbjct: 99  YNEAHAWYGRMFKKGIVPDVVLYTILIRGLSSEGRVGEAAKMLGEMIQ 146


>ref|XP_003528020.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g79540-like [Glycine max]
          Length = 535

 Score =  204 bits (518), Expect = 8e-51
 Identities = 99/138 (71%), Positives = 115/138 (83%)
 Frame = -1

Query: 414 QLADSGVVPDIFTYNILINGFCKAGNINGAFKLFKDLQIKGLSPDYVTYGTLIDGLYRVD 235
           Q+A SGV+PDI TYN+LINGFCKA NINGA K FKD+Q KG SP+ VTYGTLIDGL+R+ 
Sbjct: 200 QVACSGVMPDIVTYNVLINGFCKAANINGALKFFKDMQNKGFSPNSVTYGTLIDGLFRIG 259

Query: 234 REEDAFKIIEHMQKHAIEPNFTVYRTLMTWLCRKKKVSLACSLYLEYLKNLPGRDNDSIS 55
           REEDAFKI EHM KH  EP+F VYR LMTWLCRK+KVS A  LYLEYLKNL GR++DSI+
Sbjct: 260 REEDAFKIREHMLKHGCEPSFEVYRALMTWLCRKRKVSQAFRLYLEYLKNLRGREDDSIN 319

Query: 54  DLKEYFVREKVEEAIRGL 1
            L++ FVR KVE+A +GL
Sbjct: 320 ALEQCFVRGKVEQAFQGL 337


>ref|XP_002278530.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Vitis vinifera]
          Length = 798

 Score =  182 bits (461), Expect = 3e-44
 Identities = 84/138 (60%), Positives = 115/138 (83%)
 Frame = -1

Query: 414 QLADSGVVPDIFTYNILINGFCKAGNINGAFKLFKDLQIKGLSPDYVTYGTLIDGLYRVD 235
           QLADSGVVPDI TYN+LINGFCKA NINGAFKLF++LQ+KG SPD VTYGTLIDG +RVD
Sbjct: 519 QLADSGVVPDIMTYNVLINGFCKAKNINGAFKLFRELQLKGHSPDSVTYGTLIDGFHRVD 578

Query: 234 REEDAFKIIEHMQKHAIEPNFTVYRTLMTWLCRKKKVSLACSLYLEYLKNLPGRDNDSIS 55
           REEDAF++++ M K+   P+  VY+ LMTW CRK K+S+A SL+L+YL++LP ++++++ 
Sbjct: 579 REEDAFRVLDQMVKNGCTPSSAVYKCLMTWSCRKGKLSVAFSLWLKYLRSLPSQEDETLK 638

Query: 54  DLKEYFVREKVEEAIRGL 1
             +E+F + ++E+A+R L
Sbjct: 639 LAEEHFEKGELEKAVRCL 656



 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 35/99 (35%), Positives = 51/99 (51%)
 Frame = -1

Query: 402 SGVVPDIFTYNILINGFCKAGNINGAFKLFKDLQIKGLSPDYVTYGTLIDGLYRVDREED 223
           SG  PD  T N L++GFCK G I+ AF L +  + +G       Y +LIDGL+R  R ++
Sbjct: 265 SGCCPDSITCNALLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDE 324

Query: 222 AFKIIEHMQKHAIEPNFTVYRTLMTWLCRKKKVSLACSL 106
             +    M K  IEP+  +Y  L+   C    V  A ++
Sbjct: 325 VQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNM 363



 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 30/89 (33%), Positives = 45/89 (50%)
 Frame = -1

Query: 402 SGVVPDIFTYNILINGFCKAGNINGAFKLFKDLQIKGLSPDYVTYGTLIDGLYRVDREED 223
           +G+ PD+  Y ILI GFC+ G ++ A  +  D+  +GLSPD   Y  LI G   V   + 
Sbjct: 335 AGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDK 394

Query: 222 AFKIIEHMQKHAIEPNFTVYRTLMTWLCR 136
           A  +   + K+   P    Y  L+  +CR
Sbjct: 395 ARSLQLEISKNDCFPTSCTYTILICGMCR 423



 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 23/96 (23%), Positives = 50/96 (52%)
 Frame = -1

Query: 414 QLADSGVVPDIFTYNILINGFCKAGNINGAFKLFKDLQIKGLSPDYVTYGTLIDGLYRVD 235
           ++   G+ P+   Y I+++G C+A   +   +L   +++ G  PD +T   L+DG  ++ 
Sbjct: 226 EMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNALLDGFCKLG 285

Query: 234 REEDAFKIIEHMQKHAIEPNFTVYRTLMTWLCRKKK 127
           + ++AF +++  +K         Y +L+  L R K+
Sbjct: 286 QIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKR 321



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 26/95 (27%), Positives = 50/95 (52%)
 Frame = -1

Query: 390 PDIFTYNILINGFCKAGNINGAFKLFKDLQIKGLSPDYVTYGTLIDGLYRVDREEDAFKI 211
           P+  T+ IL+NG CK G  + A K+F ++  KG+ P+ + Y  ++ GL +  R +D  ++
Sbjct: 199 PNRATFVILLNGLCKNGKTDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRL 258

Query: 210 IEHMQKHAIEPNFTVYRTLMTWLCRKKKVSLACSL 106
           +  M+     P+      L+   C+  ++  A +L
Sbjct: 259 LNTMKVSGCCPDSITCNALLDGFCKLGQIDEAFAL 293



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 25/96 (26%), Positives = 52/96 (54%)
 Frame = -1

Query: 414 QLADSGVVPDIFTYNILINGFCKAGNINGAFKLFKDLQIKGLSPDYVTYGTLIDGLYRVD 235
           ++ D G  PD+FTYN +++   +      A  ++  +     +P+  T+  L++GL +  
Sbjct: 156 KMKDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKLNYNPNRATFVILLNGLCKNG 215

Query: 234 REEDAFKIIEHMQKHAIEPNFTVYRTLMTWLCRKKK 127
           + +DA K+ + M +  I PN  +Y  +++ LC+ K+
Sbjct: 216 KTDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKR 251


>ref|XP_002529510.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223531026|gb|EEF32879.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 804

 Score =  178 bits (452), Expect = 4e-43
 Identities = 82/138 (59%), Positives = 111/138 (80%)
 Frame = -1

Query: 414 QLADSGVVPDIFTYNILINGFCKAGNINGAFKLFKDLQIKGLSPDYVTYGTLIDGLYRVD 235
           QL DSG  P+I TYNILI+GFCKAGNINGAFKLFK+LQ+KGLSPD VTYGTLI+GL   +
Sbjct: 514 QLTDSGFAPNIITYNILIHGFCKAGNINGAFKLFKELQLKGLSPDSVTYGTLINGLLSAN 573

Query: 234 REEDAFKIIEHMQKHAIEPNFTVYRTLMTWLCRKKKVSLACSLYLEYLKNLPGRDNDSIS 55
           REEDAF +++ + K+   P   VY++ MTW CR+ K++LA SL+L+YL+++PGRD++ + 
Sbjct: 574 REEDAFTVLDQILKNGCTPITEVYKSFMTWSCRRNKITLAFSLWLKYLRSIPGRDSEVLK 633

Query: 54  DLKEYFVREKVEEAIRGL 1
            ++E F + +VEEA+RGL
Sbjct: 634 SVEENFEKGEVEEAVRGL 651



 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 39/105 (37%), Positives = 53/105 (50%)
 Frame = -1

Query: 411 LADSGVVPDIFTYNILINGFCKAGNINGAFKLFKDLQIKGLSPDYVTYGTLIDGLYRVDR 232
           + D G +PD  TYN L++GFCK G ++ A  L K  +      D   Y  LIDGL+R  R
Sbjct: 257 MKDHGCIPDSVTYNALLHGFCKLGRVDEALGLLKYFEKDRYVLDKQGYSCLIDGLFRARR 316

Query: 231 EEDAFKIIEHMQKHAIEPNFTVYRTLMTWLCRKKKVSLACSLYLE 97
            EDA      M +H I+P+  +Y  +M  L +  K   A  L  E
Sbjct: 317 FEDAQVWYRKMTEHNIKPDVILYTIMMKGLSKAGKFKDALRLLNE 361



 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 33/123 (26%), Positives = 63/123 (51%)
 Frame = -1

Query: 393 VPDIFTYNILINGFCKAGNINGAFKLFKDLQIKGLSPDYVTYGTLIDGLYRVDREEDAFK 214
           +P+I T++ILI+G CK+G    A ++F ++  + + P+ +TY  +I GL +  + + A++
Sbjct: 193 LPNIATFSILIDGMCKSGKTQNALQMFDEMTQRRILPNKITYTIIISGLCQAQKADVAYR 252

Query: 213 IIEHMQKHAIEPNFTVYRTLMTWLCRKKKVSLACSLYLEYLKNLPGRDNDSISDLKEYFV 34
           +   M+ H   P+   Y  L+   C+  +V  A  L   + K+    D    S L +   
Sbjct: 253 LFIAMKDHGCIPDSVTYNALLHGFCKLGRVDEALGLLKYFEKDRYVLDKQGYSCLIDGLF 312

Query: 33  REK 25
           R +
Sbjct: 313 RAR 315



 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 30/104 (28%), Positives = 48/104 (46%)
 Frame = -1

Query: 414 QLADSGVVPDIFTYNILINGFCKAGNINGAFKLFKDLQIKGLSPDYVTYGTLIDGLYRVD 235
           ++ + G+VPD   YN LI G+C  G ++ A  L  ++          TY  LI G+ R  
Sbjct: 361 EMTERGLVPDTHCYNALIKGYCDLGLLDEAKSLHLEISKNDCFSSACTYTILICGMCRSG 420

Query: 234 REEDAFKIIEHMQKHAIEPNFTVYRTLMTWLCRKKKVSLACSLY 103
              DA +I   M+KH   P+   +  L+   C+   +  A  L+
Sbjct: 421 LVGDAQQIFNEMEKHGCYPSVVTFNALIDGFCKAGNIEKAQLLF 464


>ref|XP_002308024.1| predicted protein [Populus trichocarpa] gi|222854000|gb|EEE91547.1|
           predicted protein [Populus trichocarpa]
          Length = 789

 Score =  175 bits (444), Expect = 3e-42
 Identities = 77/138 (55%), Positives = 111/138 (80%)
 Frame = -1

Query: 414 QLADSGVVPDIFTYNILINGFCKAGNINGAFKLFKDLQIKGLSPDYVTYGTLIDGLYRVD 235
           QLADSG  P I+TYNIL+NGFCK GN NGA+KLF+++Q KGLSPD VTYGTLI+GL R  
Sbjct: 514 QLADSGDAPGIYTYNILVNGFCKLGNFNGAYKLFREMQFKGLSPDTVTYGTLINGLLRFQ 573

Query: 234 REEDAFKIIEHMQKHAIEPNFTVYRTLMTWLCRKKKVSLACSLYLEYLKNLPGRDNDSIS 55
           REEDA+K+ + M+K+   P+  VYRT+MTW+CR+ ++  A SL+L+YL+N+  +++++I 
Sbjct: 574 REEDAYKVFDQMEKNGCTPDAAVYRTMMTWMCRRMELPRAFSLWLKYLRNIRSQEDEAIK 633

Query: 54  DLKEYFVREKVEEAIRGL 1
            ++ YF +++VE+A+RGL
Sbjct: 634 AIEGYFEKQEVEKAVRGL 651



 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 34/96 (35%), Positives = 57/96 (59%)
 Frame = -1

Query: 393 VPDIFTYNILINGFCKAGNINGAFKLFKDLQIKGLSPDYVTYGTLIDGLYRVDREEDAFK 214
           +P++ T++ILI+G CK+GN+  A  LF ++  +G+ PD  TY  +I GL R  R +DA++
Sbjct: 193 LPNVATFSILIDGLCKSGNVKDALHLFDEMTQRGILPDAFTYCVVISGLCRSKRVDDAYR 252

Query: 213 IIEHMQKHAIEPNFTVYRTLMTWLCRKKKVSLACSL 106
           + + M+   + P+F     L+   C   +V  A SL
Sbjct: 253 LFDKMKDSGVGPDFVTCNALLNGFCMLDRVDEAFSL 288



 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 31/110 (28%), Positives = 63/110 (57%)
 Frame = -1

Query: 414 QLADSGVVPDIFTYNILINGFCKAGNINGAFKLFKDLQIKGLSPDYVTYGTLIDGLYRVD 235
           ++   G++PD FTY ++I+G C++  ++ A++LF  ++  G+ PD+VT   L++G   +D
Sbjct: 221 EMTQRGILPDAFTYCVVISGLCRSKRVDDAYRLFDKMKDSGVGPDFVTCNALLNGFCMLD 280

Query: 234 REEDAFKIIEHMQKHAIEPNFTVYRTLMTWLCRKKKVSLACSLYLEYLKN 85
           R ++AF ++   +K     +   Y  L+  L R K+      LY + +++
Sbjct: 281 RVDEAFSLLRLFEKDGYVLDVRGYSCLIRGLFRAKRYEDVQLLYRKMIED 330



 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 34/104 (32%), Positives = 54/104 (51%)
 Frame = -1

Query: 414 QLADSGVVPDIFTYNILINGFCKAGNINGAFKLFKDLQIKGLSPDYVTYGTLIDGLYRVD 235
           ++ +SGVVPD   YN+LI GFC  G ++ A  L  ++      P+  TY  LI G+ R  
Sbjct: 361 EMTESGVVPDTVCYNVLIKGFCDMGLLSEARSLQLEISRHDCFPNVKTYSILISGMCRNG 420

Query: 234 REEDAFKIIEHMQKHAIEPNFTVYRTLMTWLCRKKKVSLACSLY 103
              DA +I   M+K    P+   + +L+  LC+  ++  A  L+
Sbjct: 421 LTRDAQEIFNEMEKLGCYPSAVTFNSLIDGLCKTGQLEKAHLLF 464



 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 37/106 (34%), Positives = 52/106 (49%)
 Frame = -1

Query: 414 QLADSGVVPDIFTYNILINGFCKAGNINGAFKLFKDLQIKGLSPDYVTYGTLIDGLYRVD 235
           ++ DSGV PD  T N L+NGFC    ++ AF L +  +  G   D   Y  LI GL+R  
Sbjct: 256 KMKDSGVGPDFVTCNALLNGFCMLDRVDEAFSLLRLFEKDGYVLDVRGYSCLIRGLFRAK 315

Query: 234 REEDAFKIIEHMQKHAIEPNFTVYRTLMTWLCRKKKVSLACSLYLE 97
           R ED   +   M +  ++P+  +Y  +M  L    KV  A  L  E
Sbjct: 316 RYEDVQLLYRKMIEDNVKPDVYLYTIMMKGLAEAGKVRDALELLNE 361



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 26/93 (27%), Positives = 47/93 (50%)
 Frame = -1

Query: 414 QLADSGVVPDIFTYNILINGFCKAGNINGAFKLFKDLQIKGLSPDYVTYGTLIDGLYRVD 235
           ++ +  V PD++ Y I++ G  +AG +  A +L  ++   G+ PD V Y  LI G   + 
Sbjct: 326 KMIEDNVKPDVYLYTIMMKGLAEAGKVRDALELLNEMTESGVVPDTVCYNVLIKGFCDMG 385

Query: 234 REEDAFKIIEHMQKHAIEPNFTVYRTLMTWLCR 136
              +A  +   + +H   PN   Y  L++ +CR
Sbjct: 386 LLSEARSLQLEISRHDCFPNVKTYSILISGMCR 418