BLASTX nr result

ID: Glycyrrhiza23_contig00028544 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00028544
         (376 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003538656.1| PREDICTED: uncharacterized protein LOC100809...   167   8e-40
ref|XP_003516729.1| PREDICTED: uncharacterized protein LOC100792...   160   1e-37
ref|XP_003630104.1| Transcription factor tfiiib component [Medic...   116   2e-24
ref|XP_003631592.1| PREDICTED: uncharacterized protein LOC100854...    69   4e-10
emb|CBI37684.3| unnamed protein product [Vitis vinifera]               69   4e-10

>ref|XP_003538656.1| PREDICTED: uncharacterized protein LOC100809837 [Glycine max]
          Length = 710

 Score =  167 bits (423), Expect = 8e-40
 Identities = 89/124 (71%), Positives = 97/124 (78%)
 Frame = -1

Query: 373 SSEILRTTDLSNKIDYMSSIIPFSEDNRSLSAVITSQPDSLNAMLPEAVLHNGTRDWPSS 194
           +SEILRTT+L +K D  SS I  SEDN+SL+A I SQ DSLNAML E  +HNGT DWPSS
Sbjct: 307 TSEILRTTELPDKFDDTSSSI-LSEDNKSLAAAIPSQLDSLNAMLSEDAVHNGTTDWPSS 365

Query: 193 FGKSVTETADIFSGLESLDDFLTQAATSTGKPAPNSFGKKPTEENFAIPACSSVNSFGPC 14
           FGKS  E ADIFSGLESLDDFLTQAAT TGKPA +SF  K  EENF  PA SS+NSFG C
Sbjct: 366 FGKSSREAADIFSGLESLDDFLTQAATGTGKPALHSFNGKGGEENFVTPASSSINSFGEC 425

Query: 13  DTTQ 2
           DTTQ
Sbjct: 426 DTTQ 429


>ref|XP_003516729.1| PREDICTED: uncharacterized protein LOC100792788 [Glycine max]
          Length = 935

 Score =  160 bits (405), Expect = 1e-37
 Identities = 84/124 (67%), Positives = 92/124 (74%)
 Frame = -1

Query: 373 SSEILRTTDLSNKIDYMSSIIPFSEDNRSLSAVITSQPDSLNAMLPEAVLHNGTRDWPSS 194
           +SEILRTT+L  K D  SS IPFSEDN+SL+A I SQ DS N ML E  +HNGT DW SS
Sbjct: 315 TSEILRTTELPKKFDDSSSSIPFSEDNKSLAAAIPSQLDSPNVMLSEDAVHNGTTDWSSS 374

Query: 193 FGKSVTETADIFSGLESLDDFLTQAATSTGKPAPNSFGKKPTEENFAIPACSSVNSFGPC 14
           F KS  E ADIFSGLESL DF+TQAAT TGKPA +SF  K  EENF  PA SS+NSFG C
Sbjct: 375 FRKSPGEAADIFSGLESLHDFITQAATGTGKPALHSFNGKSGEENFVTPASSSINSFGEC 434

Query: 13  DTTQ 2
           D TQ
Sbjct: 435 DITQ 438


>ref|XP_003630104.1| Transcription factor tfiiib component [Medicago truncatula]
           gi|355524126|gb|AET04580.1| Transcription factor tfiiib
           component [Medicago truncatula]
          Length = 837

 Score =  116 bits (291), Expect = 2e-24
 Identities = 61/92 (66%), Positives = 67/92 (72%)
 Frame = -1

Query: 322 SSIIPFSEDNRSLSAVITSQPDSLNAMLPEAVLHNGTRDWPSSFGKSVTETADIFSGLES 143
           SS IPFSED+RSL AVI S  DSLNAM  E+ +H+GTRD+PSSFGKSV E ADIFSGLES
Sbjct: 203 SSGIPFSEDDRSLEAVIPSHSDSLNAMPSESAVHDGTRDFPSSFGKSVAENADIFSGLES 262

Query: 142 LDDFLTQAATSTGKPAPNSFGKKPTEENFAIP 47
           LDD L Q AT T KP   SF     EE F +P
Sbjct: 263 LDDILNQDATGTAKPDLKSFNVNGAEEKFVLP 294


>ref|XP_003631592.1| PREDICTED: uncharacterized protein LOC100854024 [Vitis vinifera]
          Length = 1053

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 39/79 (49%), Positives = 50/79 (63%), Gaps = 5/79 (6%)
 Frame = -1

Query: 313 IPFSEDNRSLSAVITSQP-DSLNAMLPEAVLHNGTRDWPSSFGKSVTETADIFSGLESLD 137
           + F +D+RS   V  S P D+++A+  E  + +G  DW SS+GKS  E ADIFSGLE LD
Sbjct: 339 VTFCDDDRSSVMVNPSGPLDAIDALHSEVAISDGNGDWNSSYGKSTGENADIFSGLEYLD 398

Query: 136 DFLTQAATST----GKPAP 92
           DFL+Q AT T     KP P
Sbjct: 399 DFLSQPATVTVSAASKPQP 417


>emb|CBI37684.3| unnamed protein product [Vitis vinifera]
          Length = 992

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 39/79 (49%), Positives = 50/79 (63%), Gaps = 5/79 (6%)
 Frame = -1

Query: 313 IPFSEDNRSLSAVITSQP-DSLNAMLPEAVLHNGTRDWPSSFGKSVTETADIFSGLESLD 137
           + F +D+RS   V  S P D+++A+  E  + +G  DW SS+GKS  E ADIFSGLE LD
Sbjct: 307 VTFCDDDRSSVMVNPSGPLDAIDALHSEVAISDGNGDWNSSYGKSTGENADIFSGLEYLD 366

Query: 136 DFLTQAATST----GKPAP 92
           DFL+Q AT T     KP P
Sbjct: 367 DFLSQPATVTVSAASKPQP 385


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