BLASTX nr result

ID: Glycyrrhiza23_contig00028486 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00028486
         (244 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003540842.1| PREDICTED: PHD finger protein At1g33420-like...    84   9e-15
ref|XP_003605664.1| PHD finger protein [Medicago truncatula] gi|...    81   8e-14
ref|XP_003534422.1| PREDICTED: PHD finger protein At1g33420-like...    79   3e-13
ref|XP_002519951.1| DNA binding protein, putative [Ricinus commu...    67   2e-09
ref|XP_002893768.1| PHD finger family protein [Arabidopsis lyrat...    64   2e-08

>ref|XP_003540842.1| PREDICTED: PHD finger protein At1g33420-like [Glycine max]
          Length = 708

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 48/81 (59%), Positives = 56/81 (69%), Gaps = 1/81 (1%)
 Frame = +3

Query: 3   QSLADTELLTIKDLFSFLLALIRKFHKSLITRTPEEQHHECSNTSDELCPWTSEAVEDVQ 182
           QSLA+TELLTIKDLFSFLL LI +  K +  RT ++       TS+ LC WT   VEDVQ
Sbjct: 304 QSLAETELLTIKDLFSFLLTLILECRKPVAMRTSKQ-------TSNLLCAWTGNDVEDVQ 356

Query: 183 QAFIKVLLASGAC-KGKWVSR 242
            A IKVLLASG C + KWV+R
Sbjct: 357 HALIKVLLASGVCTEAKWVTR 377


>ref|XP_003605664.1| PHD finger protein [Medicago truncatula]
           gi|355506719|gb|AES87861.1| PHD finger protein [Medicago
           truncatula]
          Length = 719

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 46/81 (56%), Positives = 54/81 (66%), Gaps = 1/81 (1%)
 Frame = +3

Query: 3   QSLADTELLTIKDLFSFLLALIRKFHKSLITRTPEEQHHECSNTSDELCPWTSEAVEDVQ 182
           QSLA+TEL T+KDLFSFLL L++ F K     T     HE +   + LC WT   VEDVQ
Sbjct: 305 QSLAETELRTMKDLFSFLLELVQNFRKPRSAETANL--HEQTTPCNLLCSWTRNDVEDVQ 362

Query: 183 QAFIKVLLASGAC-KGKWVSR 242
           QA IKVLLAS AC + KWV+R
Sbjct: 363 QALIKVLLASSACNEAKWVTR 383


>ref|XP_003534422.1| PREDICTED: PHD finger protein At1g33420-like [Glycine max]
          Length = 708

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 45/81 (55%), Positives = 55/81 (67%), Gaps = 1/81 (1%)
 Frame = +3

Query: 3   QSLADTELLTIKDLFSFLLALIRKFHKSLITRTPEEQHHECSNTSDELCPWTSEAVEDVQ 182
           QSLA+TELLTI  LFSF+L LI +  K +  RT ++       TS+ LC WT   VE+VQ
Sbjct: 304 QSLAETELLTIGHLFSFMLTLIHECRKPVAMRTSKQ-------TSNMLCAWTGNDVEEVQ 356

Query: 183 QAFIKVLLASGAC-KGKWVSR 242
            A IKVLLASGAC + KWV+R
Sbjct: 357 HALIKVLLASGACTEAKWVTR 377


>ref|XP_002519951.1| DNA binding protein, putative [Ricinus communis]
           gi|223540997|gb|EEF42555.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 705

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 38/80 (47%), Positives = 55/80 (68%)
 Frame = +3

Query: 3   QSLADTELLTIKDLFSFLLALIRKFHKSLITRTPEEQHHECSNTSDELCPWTSEAVEDVQ 182
           QSL+D E+LT+KDL SF+L LI + ++SL+ +   ++    S+TS+ LC WT   VE VQ
Sbjct: 305 QSLSDLEVLTLKDLCSFMLRLIHQTNESLLPKATLKKIR--SSTSNVLCAWTRNDVECVQ 362

Query: 183 QAFIKVLLASGACKGKWVSR 242
           QA I+VL+A+   +  WVSR
Sbjct: 363 QAMIRVLVAASG-ENNWVSR 381


>ref|XP_002893768.1| PHD finger family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297339610|gb|EFH70027.1| PHD finger family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 697

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 35/80 (43%), Positives = 48/80 (60%)
 Frame = +3

Query: 3   QSLADTELLTIKDLFSFLLALIRKFHKSLITRTPEEQHHECSNTSDELCPWTSEAVEDVQ 182
           QSL+ +EL+T+KDLFSFLL LIR            E   + ++ S  LC W+   VE VQ
Sbjct: 305 QSLSCSELVTVKDLFSFLLQLIR------------ENRSKPTSKSSVLCAWSKSDVERVQ 352

Query: 183 QAFIKVLLASGACKGKWVSR 242
           QA +K+L A+G  +  WV+R
Sbjct: 353 QAMVKILKAAGRPRANWVTR 372


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