BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00028446
         (467 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003547332.1| PREDICTED: pentatricopeptide repeat-containi...   242   2e-62
ref|XP_003594555.1| Pentatricopeptide repeat-containing protein ...   238   3e-61
ref|XP_002277683.2| PREDICTED: pentatricopeptide repeat-containi...   233   2e-59
emb|CBI36037.3| unnamed protein product [Vitis vinifera]              233   2e-59
ref|XP_002515948.1| pentatricopeptide repeat-containing protein,...   233   2e-59

>ref|XP_003547332.1| PREDICTED: pentatricopeptide repeat-containing protein At1g51965,
           mitochondrial-like [Glycine max]
          Length = 647

 Score =  242 bits (618), Expect = 2e-62
 Identities = 116/122 (95%), Positives = 121/122 (99%)
 Frame = -2

Query: 466 EAHMRFKEMKEKGLNPDVVTYSTLIECFGKTDKVEMACRLFDEMIAEDCSPNLVTYNILL 287
           EAHMRFKEM+EKGLNPDVVTYSTLIECFGKTDKVEMACRLFDEM+AE+C+PNL+TYNILL
Sbjct: 526 EAHMRFKEMQEKGLNPDVVTYSTLIECFGKTDKVEMACRLFDEMLAEECTPNLITYNILL 585

Query: 286 DCLERSGRTAEAVDLYAKLKQQGLTPDSITYAVLERLQSGGHGKLRVRRQNPITGWVVSP 107
           DCLERSGRTAEAVDLYAKLKQQGLTPDSITYAVLERLQSGGHGKLR RRQNPITGWVVSP
Sbjct: 586 DCLERSGRTAEAVDLYAKLKQQGLTPDSITYAVLERLQSGGHGKLRFRRQNPITGWVVSP 645

Query: 106 LR 101
           LR
Sbjct: 646 LR 647



 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 34/92 (36%), Positives = 63/92 (68%)
 Frame = -2

Query: 460 HMRFKEMKEKGLNPDVVTYSTLIECFGKTDKVEMACRLFDEMIAEDCSPNLVTYNILLDC 281
           H  +++MK+ G  PD+ TY+ LI  FG+  +V++A + F+E+   DC P++++YN L++C
Sbjct: 458 HDLYEKMKQDGPPPDIFTYNILISSFGRAGRVDIAVKFFEELENSDCKPDVISYNSLINC 517

Query: 280 LERSGRTAEAVDLYAKLKQQGLTPDSITYAVL 185
           L ++G   EA   + +++++GL PD +TY+ L
Sbjct: 518 LGKNGDVDEAHMRFKEMQEKGLNPDVVTYSTL 549



 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 33/92 (35%), Positives = 57/92 (61%)
 Frame = -2

Query: 451 FKEMKEKGLNPDVVTYSTLIECFGKTDKVEMACRLFDEMIAEDCSPNLVTYNILLDCLER 272
           F++MK +   PDV TY+ +I   GK+ K + A  LF  M+A+ C+PNL+ YN +++ L +
Sbjct: 254 FEDMKRRHCEPDVFTYTIMIRMTGKSSKTDEALALFQAMLAKGCTPNLIGYNTMIEALAK 313

Query: 271 SGRTAEAVDLYAKLKQQGLTPDSITYAVLERL 176
                +AV L++K+ +  + P+  TY+V+  L
Sbjct: 314 GRMVDKAVLLFSKMVENDIQPNEFTYSVILNL 345



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 27/91 (29%), Positives = 48/91 (52%)
 Frame = -2

Query: 466 EAHMRFKEMKEKGLNPDVVTYSTLIECFGKTDKVEMACRLFDEMIAEDCSPNLVTYNILL 287
           EA     ++ EKG+  D + Y+T+    G+  ++     L+++M  +   P++ TYNIL+
Sbjct: 421 EAIDLLNKIHEKGITTDTIMYNTVFTALGRLKQISHIHDLYEKMKQDGPPPDIFTYNILI 480

Query: 286 DCLERSGRTAEAVDLYAKLKQQGLTPDSITY 194
               R+GR   AV  + +L+     PD I+Y
Sbjct: 481 SSFGRAGRVDIAVKFFEELENSDCKPDVISY 511


>ref|XP_003594555.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355483603|gb|AES64806.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 639

 Score =  238 bits (608), Expect = 3e-61
 Identities = 117/122 (95%), Positives = 119/122 (97%)
 Frame = -2

Query: 466 EAHMRFKEMKEKGLNPDVVTYSTLIECFGKTDKVEMACRLFDEMIAEDCSPNLVTYNILL 287
           EAHMRFKEM+EKGLNPDVVTYSTLIECFGKTDKVEMAC LFDEMIAE CSPNLVTYNILL
Sbjct: 518 EAHMRFKEMQEKGLNPDVVTYSTLIECFGKTDKVEMACSLFDEMIAEGCSPNLVTYNILL 577

Query: 286 DCLERSGRTAEAVDLYAKLKQQGLTPDSITYAVLERLQSGGHGKLRVRRQNPITGWVVSP 107
           DCLERSGRTAEAVDLYAKLKQQGLTPDSITYAVLERLQSG HGKLRVRRQNPITGWVVSP
Sbjct: 578 DCLERSGRTAEAVDLYAKLKQQGLTPDSITYAVLERLQSGRHGKLRVRRQNPITGWVVSP 637

Query: 106 LR 101
           L+
Sbjct: 638 LQ 639



 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 32/92 (34%), Positives = 63/92 (68%)
 Frame = -2

Query: 460 HMRFKEMKEKGLNPDVVTYSTLIECFGKTDKVEMACRLFDEMIAEDCSPNLVTYNILLDC 281
           H  +++MK+ G  PD+ TY+ LI  +G+  +V+ A ++F+E+   +C P++++YN L++C
Sbjct: 450 HDLYEKMKQDGPPPDIFTYNILISSYGRAGRVDSAVKIFEELENSNCQPDVISYNSLINC 509

Query: 280 LERSGRTAEAVDLYAKLKQQGLTPDSITYAVL 185
           L ++G   EA   + +++++GL PD +TY+ L
Sbjct: 510 LGKNGDVDEAHMRFKEMQEKGLNPDVVTYSTL 541



 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 30/94 (31%), Positives = 54/94 (57%)
 Frame = -2

Query: 466 EAHMRFKEMKEKGLNPDVVTYSTLIECFGKTDKVEMACRLFDEMIAEDCSPNLVTYNILL 287
           +A+  F++MK +   PD  TY+ +I   GK  K + +  LF  M+ +  + NL+ YN ++
Sbjct: 241 KAYKVFEDMKRRHCEPDTFTYTIMIRMTGKAGKTDESLALFQAMLEKGFTLNLIAYNTMI 300

Query: 286 DCLERSGRTAEAVDLYAKLKQQGLTPDSITYAVL 185
           + L +     +AV L++K+ + G  P+  TY+VL
Sbjct: 301 EALAKGRMADKAVLLFSKMVENGCQPNEFTYSVL 334



 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 26/96 (27%), Positives = 54/96 (56%), Gaps = 1/96 (1%)
 Frame = -2

Query: 451 FKEMKEKGLNPDVVTYSTLIECFGKTDKVEMACRLFDEMIAEDCSPNLVTYNILLDCLER 272
           + +M   G + D+  ++ L++   K  KV+ A ++F++M    C P+  TY I++    +
Sbjct: 211 YLDMLRCGYSLDIFAFNMLLDALAKDQKVDKAYKVFEDMKRRHCEPDTFTYTIMIRMTGK 270

Query: 271 SGRTAEAVDLYAKLKQQGLTPDSITY-AVLERLQSG 167
           +G+T E++ L+  + ++G T + I Y  ++E L  G
Sbjct: 271 AGKTDESLALFQAMLEKGFTLNLIAYNTMIEALAKG 306


>ref|XP_002277683.2| PREDICTED: pentatricopeptide repeat-containing protein At5g39710
           [Vitis vinifera]
          Length = 990

 Score =  233 bits (593), Expect = 2e-59
 Identities = 112/122 (91%), Positives = 119/122 (97%)
 Frame = -2

Query: 466 EAHMRFKEMKEKGLNPDVVTYSTLIECFGKTDKVEMACRLFDEMIAEDCSPNLVTYNILL 287
           EAHMRFKEM+E+GL+PDVVTYSTLIECFGKTDKVEMACRLFDEM+AE CSPN+VTYNILL
Sbjct: 372 EAHMRFKEMREEGLSPDVVTYSTLIECFGKTDKVEMACRLFDEMLAEGCSPNIVTYNILL 431

Query: 286 DCLERSGRTAEAVDLYAKLKQQGLTPDSITYAVLERLQSGGHGKLRVRRQNPITGWVVSP 107
           DCLERSGRTAEAVDLYAKLKQQGLTPDSITYAVLERLQSG H K+RVRR+NPITGWVVSP
Sbjct: 432 DCLERSGRTAEAVDLYAKLKQQGLTPDSITYAVLERLQSGSHQKVRVRRKNPITGWVVSP 491

Query: 106 LR 101
           LR
Sbjct: 492 LR 493



 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 32/94 (34%), Positives = 65/94 (69%)
 Frame = -2

Query: 466 EAHMRFKEMKEKGLNPDVVTYSTLIECFGKTDKVEMACRLFDEMIAEDCSPNLVTYNILL 287
           + H  +++MK+ G +PD+ +Y+ LI  FG+  +VE A ++F+E+    C P+++++N L+
Sbjct: 302 DLHDLYEKMKQDGPSPDIFSYNILISSFGRAGRVEEAVKIFEELENSSCKPDIISFNSLI 361

Query: 286 DCLERSGRTAEAVDLYAKLKQQGLTPDSITYAVL 185
           +CL ++G   EA   + +++++GL+PD +TY+ L
Sbjct: 362 NCLGKNGDIDEAHMRFKEMREEGLSPDVVTYSTL 395



 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 29/94 (30%), Positives = 52/94 (55%)
 Frame = -2

Query: 466 EAHMRFKEMKEKGLNPDVVTYSTLIECFGKTDKVEMACRLFDEMIAEDCSPNLVTYNILL 287
           + +M FK+MK K   PD  TY+ +I   GK  K + +  LF EM  +  +PNL+ YN ++
Sbjct: 95  QVYMVFKDMKRKHCEPDEYTYTIMIRMTGKIGKADESLTLFQEMTEKGYTPNLIAYNTMI 154

Query: 286 DCLERSGRTAEAVDLYAKLKQQGLTPDSITYAVL 185
             L  +    + + L++K+ +    P+  T++V+
Sbjct: 155 QALANNRMVDKTIFLFSKMVENNCRPNGFTFSVI 188



 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 29/91 (31%), Positives = 51/91 (56%)
 Frame = -2

Query: 466 EAHMRFKEMKEKGLNPDVVTYSTLIECFGKTDKVEMACRLFDEMIAEDCSPNLVTYNILL 287
           EA     ++ EK ++ D V Y+T++   GK  K      L+++M  +  SP++ +YNIL+
Sbjct: 267 EALDLLSKIHEKRISTDTVMYNTVLSALGKLKKTSDLHDLYEKMKQDGPSPDIFSYNILI 326

Query: 286 DCLERSGRTAEAVDLYAKLKQQGLTPDSITY 194
               R+GR  EAV ++ +L+     PD I++
Sbjct: 327 SSFGRAGRVEEAVKIFEELENSSCKPDIISF 357



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 23/86 (26%), Positives = 49/86 (56%)
 Frame = -2

Query: 451 FKEMKEKGLNPDVVTYSTLIECFGKTDKVEMACRLFDEMIAEDCSPNLVTYNILLDCLER 272
           + E++ +G   D+  Y+ L++   K +KV+    +F +M  + C P+  TY I++    +
Sbjct: 65  YVELRRRGYKLDIFAYNMLLDALAKDNKVDQVYMVFKDMKRKHCEPDEYTYTIMIRMTGK 124

Query: 271 SGRTAEAVDLYAKLKQQGLTPDSITY 194
            G+  E++ L+ ++ ++G TP+ I Y
Sbjct: 125 IGKADESLTLFQEMTEKGYTPNLIAY 150


>emb|CBI36037.3| unnamed protein product [Vitis vinifera]
          Length = 646

 Score =  233 bits (593), Expect = 2e-59
 Identities = 112/122 (91%), Positives = 119/122 (97%)
 Frame = -2

Query: 466 EAHMRFKEMKEKGLNPDVVTYSTLIECFGKTDKVEMACRLFDEMIAEDCSPNLVTYNILL 287
           EAHMRFKEM+E+GL+PDVVTYSTLIECFGKTDKVEMACRLFDEM+AE CSPN+VTYNILL
Sbjct: 525 EAHMRFKEMREEGLSPDVVTYSTLIECFGKTDKVEMACRLFDEMLAEGCSPNIVTYNILL 584

Query: 286 DCLERSGRTAEAVDLYAKLKQQGLTPDSITYAVLERLQSGGHGKLRVRRQNPITGWVVSP 107
           DCLERSGRTAEAVDLYAKLKQQGLTPDSITYAVLERLQSG H K+RVRR+NPITGWVVSP
Sbjct: 585 DCLERSGRTAEAVDLYAKLKQQGLTPDSITYAVLERLQSGSHQKVRVRRKNPITGWVVSP 644

Query: 106 LR 101
           LR
Sbjct: 645 LR 646



 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 32/94 (34%), Positives = 65/94 (69%)
 Frame = -2

Query: 466 EAHMRFKEMKEKGLNPDVVTYSTLIECFGKTDKVEMACRLFDEMIAEDCSPNLVTYNILL 287
           + H  +++MK+ G +PD+ +Y+ LI  FG+  +VE A ++F+E+    C P+++++N L+
Sbjct: 455 DLHDLYEKMKQDGPSPDIFSYNILISSFGRAGRVEEAVKIFEELENSSCKPDIISFNSLI 514

Query: 286 DCLERSGRTAEAVDLYAKLKQQGLTPDSITYAVL 185
           +CL ++G   EA   + +++++GL+PD +TY+ L
Sbjct: 515 NCLGKNGDIDEAHMRFKEMREEGLSPDVVTYSTL 548



 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 29/91 (31%), Positives = 51/91 (56%)
 Frame = -2

Query: 466 EAHMRFKEMKEKGLNPDVVTYSTLIECFGKTDKVEMACRLFDEMIAEDCSPNLVTYNILL 287
           EA     ++ EK ++ D V Y+T++   GK  K      L+++M  +  SP++ +YNIL+
Sbjct: 420 EALDLLSKIHEKRISTDTVMYNTVLSALGKLKKTSDLHDLYEKMKQDGPSPDIFSYNILI 479

Query: 286 DCLERSGRTAEAVDLYAKLKQQGLTPDSITY 194
               R+GR  EAV ++ +L+     PD I++
Sbjct: 480 SSFGRAGRVEEAVKIFEELENSSCKPDIISF 510



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 26/79 (32%), Positives = 44/79 (55%)
 Frame = -2

Query: 466 EAHMRFKEMKEKGLNPDVVTYSTLIECFGKTDKVEMACRLFDEMIAEDCSPNLVTYNILL 287
           + +M FK+MK K   PD  TY+ +I   GK  K + +  LF EM  +  +PNL+ YN ++
Sbjct: 278 QVYMVFKDMKRKHCEPDEYTYTIMIRMTGKIGKADESLTLFQEMTEKGYTPNLIAYNTMI 337

Query: 286 DCLERSGRTAEAVDLYAKL 230
             L  +    + + L++K+
Sbjct: 338 QALANNRMVDKTIFLFSKM 356



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 23/86 (26%), Positives = 49/86 (56%)
 Frame = -2

Query: 451 FKEMKEKGLNPDVVTYSTLIECFGKTDKVEMACRLFDEMIAEDCSPNLVTYNILLDCLER 272
           + E++ +G   D+  Y+ L++   K +KV+    +F +M  + C P+  TY I++    +
Sbjct: 248 YVELRRRGYKLDIFAYNMLLDALAKDNKVDQVYMVFKDMKRKHCEPDEYTYTIMIRMTGK 307

Query: 271 SGRTAEAVDLYAKLKQQGLTPDSITY 194
            G+  E++ L+ ++ ++G TP+ I Y
Sbjct: 308 IGKADESLTLFQEMTEKGYTPNLIAY 333


>ref|XP_002515948.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223544853|gb|EEF46368.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 706

 Score =  233 bits (593), Expect = 2e-59
 Identities = 113/127 (88%), Positives = 121/127 (95%)
 Frame = -2

Query: 466 EAHMRFKEMKEKGLNPDVVTYSTLIECFGKTDKVEMACRLFDEMIAEDCSPNLVTYNILL 287
           EAH+RF+EM+EKGLNPDVVTYSTLIECFGKTDKVEMACRLFDEM+AE C PN+VTYNILL
Sbjct: 372 EAHIRFREMQEKGLNPDVVTYSTLIECFGKTDKVEMACRLFDEMLAEGCFPNIVTYNILL 431

Query: 286 DCLERSGRTAEAVDLYAKLKQQGLTPDSITYAVLERLQSGGHGKLRVRRQNPITGWVVSP 107
           DCLERSGRTAEAVDLYAKLKQQGLTPDSITY+VLERLQSG H KLRVRR+NPITGWVVSP
Sbjct: 432 DCLERSGRTAEAVDLYAKLKQQGLTPDSITYSVLERLQSGSHRKLRVRRKNPITGWVVSP 491

Query: 106 LR*Y*KQ 86
           LR + KQ
Sbjct: 492 LRYFLKQ 498



 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 34/89 (38%), Positives = 60/89 (67%)
 Frame = -2

Query: 451 FKEMKEKGLNPDVVTYSTLIECFGKTDKVEMACRLFDEMIAEDCSPNLVTYNILLDCLER 272
           +++MK  G  PD+ TY+ LI  FG+  KV  A ++F+E+   DC P++++YN L++CL +
Sbjct: 307 YEKMKLDGPLPDIFTYNILISSFGRAGKVYEAIKIFEELENSDCKPDIISYNSLINCLGK 366

Query: 271 SGRTAEAVDLYAKLKQQGLTPDSITYAVL 185
           +G   EA   + +++++GL PD +TY+ L
Sbjct: 367 NGDLDEAHIRFREMQEKGLNPDVVTYSTL 395



 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 31/94 (32%), Positives = 57/94 (60%)
 Frame = -2

Query: 466 EAHMRFKEMKEKGLNPDVVTYSTLIECFGKTDKVEMACRLFDEMIAEDCSPNLVTYNILL 287
           +A   F++MK+K   PD  TY+ +I   G+  K++ +  LF+EM+ + CSPNL+ YN ++
Sbjct: 95  QAFKVFEDMKKKHCEPDEYTYTIMIRMTGRIGKLDESLALFEEMLNKGCSPNLIAYNTMI 154

Query: 286 DCLERSGRTAEAVDLYAKLKQQGLTPDSITYAVL 185
             L  S    + + L++K+ ++   P+  TY+V+
Sbjct: 155 QALANSRMVDKTILLFSKMMEKNCRPNEFTYSVI 188



 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 26/86 (30%), Positives = 50/86 (58%)
 Frame = -2

Query: 451 FKEMKEKGLNPDVVTYSTLIECFGKTDKVEMACRLFDEMIAEDCSPNLVTYNILLDCLER 272
           + EMK KG   D+  ++ L++   K  KV+ A ++F++M  + C P+  TY I++    R
Sbjct: 65  YLEMKRKGYTLDIFAFNMLLDALAKDQKVDQAFKVFEDMKKKHCEPDEYTYTIMIRMTGR 124

Query: 271 SGRTAEAVDLYAKLKQQGLTPDSITY 194
            G+  E++ L+ ++  +G +P+ I Y
Sbjct: 125 IGKLDESLALFEEMLNKGCSPNLIAY 150