BLASTX nr result
ID: Glycyrrhiza23_contig00028441
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza23_contig00028441 (270 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003622209.1| Double-strand-break repair protein rad21-lik... 100 1e-19 ref|XP_003553237.1| PREDICTED: uncharacterized protein LOC100810... 92 3e-17 gb|ADK60791.1| sister chromatid cohesion 1 protein, partial [Ara... 83 3e-14 ref|XP_002331697.1| predicted protein [Populus trichocarpa] gi|2... 72 4e-11 ref|NP_001119344.1| Sister chromatid cohesion 1 protein 2 [Arabi... 71 8e-11 >ref|XP_003622209.1| Double-strand-break repair protein rad21-like protein [Medicago truncatula] gi|355497224|gb|AES78427.1| Double-strand-break repair protein rad21-like protein [Medicago truncatula] Length = 853 Score = 100 bits (249), Expect = 1e-19 Identities = 50/72 (69%), Positives = 59/72 (81%) Frame = +2 Query: 2 LHKCFLEQRKETEWNVLNFSQVSRGRTRKECARLFYEILILRTTSYVDVQQNYPYGDIAV 181 L K F + K+ E +N SQVS+GRTRKE ARLFYEIL+L+TT+YVDVQQN YGDIAV Sbjct: 782 LSKSFQDAGKQKESGSVNLSQVSQGRTRKESARLFYEILVLKTTNYVDVQQNEAYGDIAV 841 Query: 182 QKLPKLDQTFGV 217 +KLPKLD+TFGV Sbjct: 842 KKLPKLDKTFGV 853 >ref|XP_003553237.1| PREDICTED: uncharacterized protein LOC100810733 [Glycine max] Length = 882 Score = 92.4 bits (228), Expect = 3e-17 Identities = 45/70 (64%), Positives = 55/70 (78%) Frame = +2 Query: 2 LHKCFLEQRKETEWNVLNFSQVSRGRTRKECARLFYEILILRTTSYVDVQQNYPYGDIAV 181 LH+ FL RK+ E + +NFSQV GR RKE A LFYE+L+L+TT YVDV+QN YGDIA+ Sbjct: 426 LHQSFLHARKQRE-DTVNFSQVFGGRARKESALLFYEVLVLKTTGYVDVEQNKAYGDIAI 484 Query: 182 QKLPKLDQTF 211 +LPKLDQTF Sbjct: 485 SRLPKLDQTF 494 >gb|ADK60791.1| sister chromatid cohesion 1 protein, partial [Arachis diogoi] Length = 71 Score = 82.8 bits (203), Expect = 3e-14 Identities = 39/58 (67%), Positives = 46/58 (79%) Frame = +2 Query: 2 LHKCFLEQRKETEWNVLNFSQVSRGRTRKECARLFYEILILRTTSYVDVQQNYPYGDI 175 LH+ +L RK+T V+NFSQV GR RKECARLFYE+L+LRTTSYV V+QN YGDI Sbjct: 13 LHRSYLGLRKQTHEQVVNFSQVLEGRVRKECARLFYELLVLRTTSYVGVEQNSAYGDI 70 >ref|XP_002331697.1| predicted protein [Populus trichocarpa] gi|222874175|gb|EEF11306.1| predicted protein [Populus trichocarpa] Length = 770 Score = 72.4 bits (176), Expect = 4e-11 Identities = 34/68 (50%), Positives = 47/68 (69%) Frame = +2 Query: 2 LHKCFLEQRKETEWNVLNFSQVSRGRTRKECARLFYEILILRTTSYVDVQQNYPYGDIAV 181 LH FL Q+K + VLN ++ GRT++E ARLFYEIL+L++ YVDV++ YGDI + Sbjct: 699 LHASFLIQKKRRQEEVLNLLRILEGRTKRESARLFYEILVLKSKGYVDVKEENLYGDILI 758 Query: 182 QKLPKLDQ 205 K P+ DQ Sbjct: 759 WKTPQWDQ 766 >ref|NP_001119344.1| Sister chromatid cohesion 1 protein 2 [Arabidopsis thaliana] gi|332007221|gb|AED94604.1| Sister chromatid cohesion 1 protein 2 [Arabidopsis thaliana] Length = 678 Score = 71.2 bits (173), Expect = 8e-11 Identities = 32/65 (49%), Positives = 47/65 (72%) Frame = +2 Query: 2 LHKCFLEQRKETEWNVLNFSQVSRGRTRKECARLFYEILILRTTSYVDVQQNYPYGDIAV 181 L K FLEQR+ E ++ Q+ RGRT+KE ARLFYE L+L+T YV+V+QN+PY D+ + Sbjct: 609 LEKTFLEQREREEEEKVSLLQLCRGRTQKESARLFYETLVLKTKGYVEVKQNHPYSDVFL 668 Query: 182 QKLPK 196 ++ + Sbjct: 669 MRVSR 673