BLASTX nr result

ID: Glycyrrhiza23_contig00028441 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00028441
         (270 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003622209.1| Double-strand-break repair protein rad21-lik...   100   1e-19
ref|XP_003553237.1| PREDICTED: uncharacterized protein LOC100810...    92   3e-17
gb|ADK60791.1| sister chromatid cohesion 1 protein, partial [Ara...    83   3e-14
ref|XP_002331697.1| predicted protein [Populus trichocarpa] gi|2...    72   4e-11
ref|NP_001119344.1| Sister chromatid cohesion 1 protein 2 [Arabi...    71   8e-11

>ref|XP_003622209.1| Double-strand-break repair protein rad21-like protein [Medicago
           truncatula] gi|355497224|gb|AES78427.1|
           Double-strand-break repair protein rad21-like protein
           [Medicago truncatula]
          Length = 853

 Score =  100 bits (249), Expect = 1e-19
 Identities = 50/72 (69%), Positives = 59/72 (81%)
 Frame = +2

Query: 2   LHKCFLEQRKETEWNVLNFSQVSRGRTRKECARLFYEILILRTTSYVDVQQNYPYGDIAV 181
           L K F +  K+ E   +N SQVS+GRTRKE ARLFYEIL+L+TT+YVDVQQN  YGDIAV
Sbjct: 782 LSKSFQDAGKQKESGSVNLSQVSQGRTRKESARLFYEILVLKTTNYVDVQQNEAYGDIAV 841

Query: 182 QKLPKLDQTFGV 217
           +KLPKLD+TFGV
Sbjct: 842 KKLPKLDKTFGV 853


>ref|XP_003553237.1| PREDICTED: uncharacterized protein LOC100810733 [Glycine max]
          Length = 882

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 45/70 (64%), Positives = 55/70 (78%)
 Frame = +2

Query: 2   LHKCFLEQRKETEWNVLNFSQVSRGRTRKECARLFYEILILRTTSYVDVQQNYPYGDIAV 181
           LH+ FL  RK+ E + +NFSQV  GR RKE A LFYE+L+L+TT YVDV+QN  YGDIA+
Sbjct: 426 LHQSFLHARKQRE-DTVNFSQVFGGRARKESALLFYEVLVLKTTGYVDVEQNKAYGDIAI 484

Query: 182 QKLPKLDQTF 211
            +LPKLDQTF
Sbjct: 485 SRLPKLDQTF 494


>gb|ADK60791.1| sister chromatid cohesion 1 protein, partial [Arachis diogoi]
          Length = 71

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 39/58 (67%), Positives = 46/58 (79%)
 Frame = +2

Query: 2   LHKCFLEQRKETEWNVLNFSQVSRGRTRKECARLFYEILILRTTSYVDVQQNYPYGDI 175
           LH+ +L  RK+T   V+NFSQV  GR RKECARLFYE+L+LRTTSYV V+QN  YGDI
Sbjct: 13  LHRSYLGLRKQTHEQVVNFSQVLEGRVRKECARLFYELLVLRTTSYVGVEQNSAYGDI 70


>ref|XP_002331697.1| predicted protein [Populus trichocarpa] gi|222874175|gb|EEF11306.1|
           predicted protein [Populus trichocarpa]
          Length = 770

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 34/68 (50%), Positives = 47/68 (69%)
 Frame = +2

Query: 2   LHKCFLEQRKETEWNVLNFSQVSRGRTRKECARLFYEILILRTTSYVDVQQNYPYGDIAV 181
           LH  FL Q+K  +  VLN  ++  GRT++E ARLFYEIL+L++  YVDV++   YGDI +
Sbjct: 699 LHASFLIQKKRRQEEVLNLLRILEGRTKRESARLFYEILVLKSKGYVDVKEENLYGDILI 758

Query: 182 QKLPKLDQ 205
            K P+ DQ
Sbjct: 759 WKTPQWDQ 766


>ref|NP_001119344.1| Sister chromatid cohesion 1 protein 2 [Arabidopsis thaliana]
           gi|332007221|gb|AED94604.1| Sister chromatid cohesion 1
           protein 2 [Arabidopsis thaliana]
          Length = 678

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 32/65 (49%), Positives = 47/65 (72%)
 Frame = +2

Query: 2   LHKCFLEQRKETEWNVLNFSQVSRGRTRKECARLFYEILILRTTSYVDVQQNYPYGDIAV 181
           L K FLEQR+  E   ++  Q+ RGRT+KE ARLFYE L+L+T  YV+V+QN+PY D+ +
Sbjct: 609 LEKTFLEQREREEEEKVSLLQLCRGRTQKESARLFYETLVLKTKGYVEVKQNHPYSDVFL 668

Query: 182 QKLPK 196
            ++ +
Sbjct: 669 MRVSR 673


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