BLASTX nr result

ID: Glycyrrhiza23_contig00028377 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00028377
         (211 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003595076.1| DNA ligase [Medicago truncatula] gi|35548412...   137   9e-31
ref|XP_003546435.1| PREDICTED: DNA ligase 4-like [Glycine max]        136   2e-30
emb|CBI17913.3| unnamed protein product [Vitis vinifera]              127   9e-28
ref|XP_002263967.1| PREDICTED: DNA ligase 4-like [Vitis vinifera]     127   9e-28
ref|XP_002325262.1| predicted protein [Populus trichocarpa] gi|2...   121   5e-26

>ref|XP_003595076.1| DNA ligase [Medicago truncatula] gi|355484124|gb|AES65327.1| DNA
           ligase [Medicago truncatula]
          Length = 1244

 Score =  137 bits (345), Expect = 9e-31
 Identities = 61/69 (88%), Positives = 67/69 (97%)
 Frame = -3

Query: 209 RLEVLVPNGGINSHRSSGEPCWSFIAHNVDEVERFFKETIENRDEGIVVKDLNSKWEPSD 30
           R E+L+PNGGIN+HRSSGEPCWSFIAHN +EVERFFKETIENR+EGIVVKDL+SKWEPSD
Sbjct: 382 RFEILLPNGGINNHRSSGEPCWSFIAHNAEEVERFFKETIENREEGIVVKDLSSKWEPSD 441

Query: 29  RSGKWLKLK 3
           RSGKWLKLK
Sbjct: 442 RSGKWLKLK 450


>ref|XP_003546435.1| PREDICTED: DNA ligase 4-like [Glycine max]
          Length = 1171

 Score =  136 bits (343), Expect = 2e-30
 Identities = 63/69 (91%), Positives = 66/69 (95%)
 Frame = -3

Query: 209 RLEVLVPNGGINSHRSSGEPCWSFIAHNVDEVERFFKETIENRDEGIVVKDLNSKWEPSD 30
           RLE+LVPN GINSH SSGEPCWSFIAHNVDEVERFFKETIENRDEGIV+KD +SKWEPSD
Sbjct: 373 RLEILVPNAGINSHISSGEPCWSFIAHNVDEVERFFKETIENRDEGIVLKDHSSKWEPSD 432

Query: 29  RSGKWLKLK 3
           RSGKWLKLK
Sbjct: 433 RSGKWLKLK 441


>emb|CBI17913.3| unnamed protein product [Vitis vinifera]
          Length = 1163

 Score =  127 bits (319), Expect = 9e-28
 Identities = 55/69 (79%), Positives = 65/69 (94%)
 Frame = -3

Query: 209 RLEVLVPNGGINSHRSSGEPCWSFIAHNVDEVERFFKETIENRDEGIVVKDLNSKWEPSD 30
           R E+LVP+GG+N+HR SGEPCWS IA++VD+VERFFK+T+ENRDEGIV+KDL SKWEPSD
Sbjct: 374 RFEILVPSGGLNTHRPSGEPCWSLIAYDVDDVERFFKKTVENRDEGIVLKDLGSKWEPSD 433

Query: 29  RSGKWLKLK 3
           RSGKWLKLK
Sbjct: 434 RSGKWLKLK 442


>ref|XP_002263967.1| PREDICTED: DNA ligase 4-like [Vitis vinifera]
          Length = 1162

 Score =  127 bits (319), Expect = 9e-28
 Identities = 55/69 (79%), Positives = 65/69 (94%)
 Frame = -3

Query: 209 RLEVLVPNGGINSHRSSGEPCWSFIAHNVDEVERFFKETIENRDEGIVVKDLNSKWEPSD 30
           R E+LVP+GG+N+HR SGEPCWS IA++VD+VERFFK+T+ENRDEGIV+KDL SKWEPSD
Sbjct: 373 RFEILVPSGGLNTHRPSGEPCWSLIAYDVDDVERFFKKTVENRDEGIVLKDLGSKWEPSD 432

Query: 29  RSGKWLKLK 3
           RSGKWLKLK
Sbjct: 433 RSGKWLKLK 441


>ref|XP_002325262.1| predicted protein [Populus trichocarpa] gi|222866696|gb|EEF03827.1|
           predicted protein [Populus trichocarpa]
          Length = 1242

 Score =  121 bits (304), Expect = 5e-26
 Identities = 55/69 (79%), Positives = 63/69 (91%)
 Frame = -3

Query: 209 RLEVLVPNGGINSHRSSGEPCWSFIAHNVDEVERFFKETIENRDEGIVVKDLNSKWEPSD 30
           RLE+LVPNGG+N+HR  GEP  S IA+NVD++E+FFKETIENRDEGIV+KDL SKWEPSD
Sbjct: 382 RLEILVPNGGLNAHRLPGEPYCSLIAYNVDDIEKFFKETIENRDEGIVLKDLGSKWEPSD 441

Query: 29  RSGKWLKLK 3
           RSGKWLKLK
Sbjct: 442 RSGKWLKLK 450


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