BLASTX nr result

ID: Glycyrrhiza23_contig00028311 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00028311
         (223 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003545238.1| PREDICTED: uncharacterized protein LOC100779...   100   2e-19
ref|XP_003616579.1| Fasciclin-like domain-containing protein [Me...    83   3e-14
ref|XP_002311206.1| fasciclin domain-containing protein [Populus...    65   4e-09

>ref|XP_003545238.1| PREDICTED: uncharacterized protein LOC100779091 [Glycine max]
          Length = 182

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 50/69 (72%), Positives = 57/69 (82%)
 Frame = +2

Query: 17  MRRRQVLKHSIALVTILVSVCSLFIVIVTIFKLPEAQTKNSEMGFYPIIRSRKVSNQDVK 196
           MR+RQVLKHSIA+V++LV VC  FIV VT+FKLPEA  K+ +MGFYP IRSRKVS QD  
Sbjct: 1   MRKRQVLKHSIAIVSMLVCVCCFFIVSVTVFKLPEAPRKDRQMGFYPTIRSRKVSLQDFN 60

Query: 197 LCKFGEMMI 223
           L KFGEMMI
Sbjct: 61  LGKFGEMMI 69


>ref|XP_003616579.1| Fasciclin-like domain-containing protein [Medicago truncatula]
           gi|355517914|gb|AES99537.1| Fasciclin-like
           domain-containing protein [Medicago truncatula]
          Length = 200

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 41/70 (58%), Positives = 52/70 (74%), Gaps = 1/70 (1%)
 Frame = +2

Query: 17  MRRRQVLKHSIALVTILVSVCSLFIVIVTIFKLPEAQTK-NSEMGFYPIIRSRKVSNQDV 193
           M++   LKHSIAL+TIL++VC +FI+ +T F LPE Q K N +MGF  I RSRK+S QD 
Sbjct: 1   MKKHHFLKHSIALITILLTVCCIFIIAITFFNLPEPQNKTNRKMGFDSITRSRKISIQDF 60

Query: 194 KLCKFGEMMI 223
            L KFGEMM+
Sbjct: 61  NLGKFGEMMV 70


>ref|XP_002311206.1| fasciclin domain-containing protein [Populus trichocarpa]
           gi|222851026|gb|EEE88573.1| fasciclin domain-containing
           protein [Populus trichocarpa]
          Length = 179

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 34/69 (49%), Positives = 49/69 (71%)
 Frame = +2

Query: 17  MRRRQVLKHSIALVTILVSVCSLFIVIVTIFKLPEAQTKNSEMGFYPIIRSRKVSNQDVK 196
           MRR   +K+SIA V +++S+C L +++V++F+LPEA   N   G Y  IR+RKVS +D  
Sbjct: 1   MRRGCFVKNSIAFVGVVISICCLSVIMVSVFQLPEASLINKVTGSYRTIRTRKVS-KDEA 59

Query: 197 LCKFGEMMI 223
           + KFGEMMI
Sbjct: 60  IGKFGEMMI 68


Top