BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00028308
         (249 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD28627.2| RNA-directed DNA polymerase (Reverse transcriptas...    67   1e-09
gb|ABO80460.1| RNA-directed DNA polymerase ; Ribonuclease H, put...    67   2e-09
ref|XP_002317858.1| predicted protein [Populus trichocarpa] gi|2...    63   2e-08
gb|ABA96650.1| retrotransposon protein, putative, unclassified [...    59   4e-07
gb|EEE52912.1| hypothetical protein OsJ_35521 [Oryza sativa Japo...    59   4e-07

>gb|ABD28627.2| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H
           [Medicago truncatula]
          Length = 1296

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 32/70 (45%), Positives = 47/70 (67%), Gaps = 1/70 (1%)
 Frame = -1

Query: 219 MDRCDLLDLNFFGGKYTWQHPCRGGRLVSRQLDRAICD-PWCMAFPEATVEHLVRRYLDH 43
           M+ C+LLDL   GG++TW     G R++S++LDR + +  W ++FPEA VE L R + DH
Sbjct: 164 MNNCNLLDLTTTGGRFTWHKNNNGIRILSKKLDRGMANVDWRLSFPEAFVEVLCRLHSDH 223

Query: 42  NPILIRCSSL 13
           NP+L+R   L
Sbjct: 224 NPLLLRFGGL 233


>gb|ABO80460.1| RNA-directed DNA polymerase ; Ribonuclease H, putative [Medicago
           truncatula]
          Length = 311

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 33/74 (44%), Positives = 48/74 (64%), Gaps = 1/74 (1%)
 Frame = -1

Query: 219 MDRCDLLDLNFFGGKYTWQHPCRGGRLVSRQLDRAICD-PWCMAFPEATVEHLVRRYLDH 43
           M  C+LLDL   GG++TW     G R++S++LDRAI +  W ++FPEA ++ L R + DH
Sbjct: 129 MADCNLLDLTAIGGRFTWHRNHNGHRILSKKLDRAIANVDWRLSFPEAFIDVLCRTHSDH 188

Query: 42  NPILIRCSSLVGAR 1
           N IL+R   L  +R
Sbjct: 189 NLILLRFGGLPQSR 202


>ref|XP_002317858.1| predicted protein [Populus trichocarpa] gi|222858531|gb|EEE96078.1|
           predicted protein [Populus trichocarpa]
          Length = 1052

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 32/70 (45%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
 Frame = -1

Query: 219 MDRCDLLDLNFFGGKYTWQHPCRGGRLVSRQLDRAICD-PWCMAFPEATVEHLVRRYLDH 43
           +  C+L DL   G K+TW    +G R ++++LDRA+ D  W   FPEA VE L R + DH
Sbjct: 421 LSACNLTDLEAKGFKFTWHRYIQGVRHLAKKLDRALVDLEWQDKFPEAFVESLGRLHSDH 480

Query: 42  NPILIRCSSL 13
           +PIL+RC  L
Sbjct: 481 HPILLRCGGL 490


>gb|ABA96650.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1100

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 27/68 (39%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
 Frame = -1

Query: 219 MDRCDLLDLNFFGGKYTWQHPCRGGRLVSRQLDRAICDP-WCMAFPEATVEHLVRRYLDH 43
           +  CD+ DL F G  +T+ +  +GG  V  +LDRA+    W + +P+A V HLV    DH
Sbjct: 277 LSHCDVFDLGFIGTPWTYDNKRKGGYNVRVRLDRAVASQSWSVLYPQAQVRHLVSSRSDH 336

Query: 42  NPILIRCS 19
            PIL++C+
Sbjct: 337 CPILVQCT 344


>gb|EEE52912.1| hypothetical protein OsJ_35521 [Oryza sativa Japonica Group]
          Length = 1003

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 27/68 (39%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
 Frame = -1

Query: 219 MDRCDLLDLNFFGGKYTWQHPCRGGRLVSRQLDRAICDP-WCMAFPEATVEHLVRRYLDH 43
           +  CD+ DL F G  +T+ +  +GG  V  +LDRA+    W + +P+A V HLV    DH
Sbjct: 243 LSHCDVFDLGFIGTPWTYDNKRKGGYNVRVRLDRAVASQSWSVLYPQAQVRHLVSSRSDH 302

Query: 42  NPILIRCS 19
            PIL++C+
Sbjct: 303 CPILVQCT 310