BLASTX nr result

ID: Glycyrrhiza23_contig00028302 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00028302
         (397 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003524946.1| PREDICTED: F-box/kelch-repeat protein At1g55...   157   1e-58
gb|ACU18853.1| unknown [Glycine max]                                  157   1e-58
gb|AFK40250.1| unknown [Lotus japonicus]                              153   2e-58
ref|XP_003629702.1| F-box/kelch-repeat protein [Medicago truncat...   154   2e-58
ref|XP_003531234.1| PREDICTED: F-box/kelch-repeat protein At1g55...   157   3e-58

>ref|XP_003524946.1| PREDICTED: F-box/kelch-repeat protein At1g55270-like isoform 1
           [Glycine max] gi|356512481|ref|XP_003524947.1|
           PREDICTED: F-box/kelch-repeat protein At1g55270-like
           isoform 2 [Glycine max]
          Length = 437

 Score =  157 bits (398), Expect(2) = 1e-58
 Identities = 69/82 (84%), Positives = 77/82 (93%)
 Frame = -2

Query: 396 DPNRNRWNFIPEMSTAMVPFIGVVHNGTWFLKGLGSGGDVMCDAYSPETDTWTPVTNGMV 217
           DPNRNRW+FI EM+TAMVPFIGVVHNGTWFLKGLGS  +V+C++YS ETDTWTPV+NGMV
Sbjct: 249 DPNRNRWSFISEMTTAMVPFIGVVHNGTWFLKGLGSNRNVICESYSQETDTWTPVSNGMV 308

Query: 216 SGWRNPCISLNGQLYALDCQDG 151
           +GWRNP ISLNGQLYALDCQDG
Sbjct: 309 NGWRNPSISLNGQLYALDCQDG 330



 Score = 94.4 bits (233), Expect(2) = 1e-58
 Identities = 46/50 (92%), Positives = 46/50 (92%)
 Frame = -1

Query: 151 CKLSVYDGATDSWKKFIDSKLHLGSSRALDAAALVSLNGKLCIIRNNMSI 2
           CKL VYD ATDSWKKFIDSKLHLGSS ALDAAALV LNGKLCIIRNNMSI
Sbjct: 331 CKLKVYDRATDSWKKFIDSKLHLGSSHALDAAALVPLNGKLCIIRNNMSI 380


>gb|ACU18853.1| unknown [Glycine max]
          Length = 245

 Score =  157 bits (398), Expect(2) = 1e-58
 Identities = 69/82 (84%), Positives = 77/82 (93%)
 Frame = -2

Query: 396 DPNRNRWNFIPEMSTAMVPFIGVVHNGTWFLKGLGSGGDVMCDAYSPETDTWTPVTNGMV 217
           DPNRNRW+FI EM+TAMVPFIGVVHNGTWFLKGLGS  +V+C++YS ETDTWTPV+NGMV
Sbjct: 57  DPNRNRWSFISEMTTAMVPFIGVVHNGTWFLKGLGSNRNVICESYSQETDTWTPVSNGMV 116

Query: 216 SGWRNPCISLNGQLYALDCQDG 151
           +GWRNP ISLNGQLYALDCQDG
Sbjct: 117 NGWRNPSISLNGQLYALDCQDG 138



 Score = 94.4 bits (233), Expect(2) = 1e-58
 Identities = 46/50 (92%), Positives = 46/50 (92%)
 Frame = -1

Query: 151 CKLSVYDGATDSWKKFIDSKLHLGSSRALDAAALVSLNGKLCIIRNNMSI 2
           CKL VYD ATDSWKKFIDSKLHLGSS ALDAAALV LNGKLCIIRNNMSI
Sbjct: 139 CKLKVYDRATDSWKKFIDSKLHLGSSHALDAAALVPLNGKLCIIRNNMSI 188


>gb|AFK40250.1| unknown [Lotus japonicus]
          Length = 437

 Score =  153 bits (386), Expect(2) = 2e-58
 Identities = 67/82 (81%), Positives = 76/82 (92%)
 Frame = -2

Query: 396 DPNRNRWNFIPEMSTAMVPFIGVVHNGTWFLKGLGSGGDVMCDAYSPETDTWTPVTNGMV 217
           DPNRNRW+FI EMSTAMVPFIGVVHN TWFLKGLG+  +V+C++Y+ ETDTWTPV+NGMV
Sbjct: 249 DPNRNRWSFISEMSTAMVPFIGVVHNETWFLKGLGTNRNVICESYAHETDTWTPVSNGMV 308

Query: 216 SGWRNPCISLNGQLYALDCQDG 151
           +GWRNP ISLNGQLYALDCQDG
Sbjct: 309 NGWRNPSISLNGQLYALDCQDG 330



 Score = 98.2 bits (243), Expect(2) = 2e-58
 Identities = 47/50 (94%), Positives = 48/50 (96%)
 Frame = -1

Query: 151 CKLSVYDGATDSWKKFIDSKLHLGSSRALDAAALVSLNGKLCIIRNNMSI 2
           CKL VYDGATDSWK+FIDSKLHLGSSRALDAAALV LNGKLCIIRNNMSI
Sbjct: 331 CKLKVYDGATDSWKRFIDSKLHLGSSRALDAAALVPLNGKLCIIRNNMSI 380


>ref|XP_003629702.1| F-box/kelch-repeat protein [Medicago truncatula]
           gi|355523724|gb|AET04178.1| F-box/kelch-repeat protein
           [Medicago truncatula]
          Length = 437

 Score =  154 bits (389), Expect(2) = 2e-58
 Identities = 67/82 (81%), Positives = 75/82 (91%)
 Frame = -2

Query: 396 DPNRNRWNFIPEMSTAMVPFIGVVHNGTWFLKGLGSGGDVMCDAYSPETDTWTPVTNGMV 217
           DPNRNRW+FI EM+TAMVPFIGV+HNGTWFLKGLGS  +V+C+AYS E+DTWTPV NGMV
Sbjct: 249 DPNRNRWSFISEMTTAMVPFIGVIHNGTWFLKGLGSNRNVICEAYSQESDTWTPVNNGMV 308

Query: 216 SGWRNPCISLNGQLYALDCQDG 151
            GWRNP ISLNG+LYALDCQDG
Sbjct: 309 VGWRNPSISLNGELYALDCQDG 330



 Score = 96.7 bits (239), Expect(2) = 2e-58
 Identities = 47/50 (94%), Positives = 48/50 (96%)
 Frame = -1

Query: 151 CKLSVYDGATDSWKKFIDSKLHLGSSRALDAAALVSLNGKLCIIRNNMSI 2
           CKL VYD ATDSWKKFIDS+LHLGSSRALDAAALVSLNGKLCIIRNNMSI
Sbjct: 331 CKLKVYDMATDSWKKFIDSRLHLGSSRALDAAALVSLNGKLCIIRNNMSI 380


>ref|XP_003531234.1| PREDICTED: F-box/kelch-repeat protein At1g55270-like [Glycine max]
          Length = 437

 Score =  157 bits (398), Expect(2) = 3e-58
 Identities = 69/82 (84%), Positives = 77/82 (93%)
 Frame = -2

Query: 396 DPNRNRWNFIPEMSTAMVPFIGVVHNGTWFLKGLGSGGDVMCDAYSPETDTWTPVTNGMV 217
           DPNRNRW+FI EM+TAMVPFIGVVHNGTWFLKGLGS  +V+C++YS ETDTWTPV+NGMV
Sbjct: 249 DPNRNRWSFISEMTTAMVPFIGVVHNGTWFLKGLGSNRNVICESYSQETDTWTPVSNGMV 308

Query: 216 SGWRNPCISLNGQLYALDCQDG 151
           +GWRNP ISLNGQLYALDCQDG
Sbjct: 309 NGWRNPSISLNGQLYALDCQDG 330



 Score = 92.8 bits (229), Expect(2) = 3e-58
 Identities = 45/50 (90%), Positives = 46/50 (92%)
 Frame = -1

Query: 151 CKLSVYDGATDSWKKFIDSKLHLGSSRALDAAALVSLNGKLCIIRNNMSI 2
           CKL VYD A+DSWKKFIDSKLHLG SRALDAAALV LNGKLCIIRNNMSI
Sbjct: 331 CKLKVYDRASDSWKKFIDSKLHLGRSRALDAAALVPLNGKLCIIRNNMSI 380


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