BLASTX nr result

ID: Glycyrrhiza23_contig00028301 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00028301
         (349 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003553784.1| PREDICTED: cyclic nucleotide-gated ion chann...    62   4e-08
ref|XP_003626568.1| Cyclic nucleotide-gated channel C [Medicago ...    55   4e-07
ref|XP_003520870.1| PREDICTED: cyclic nucleotide-gated ion chann...    59   5e-07

>ref|XP_003553784.1| PREDICTED: cyclic nucleotide-gated ion channel 1-like [Glycine max]
          Length = 716

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 32/51 (62%), Positives = 41/51 (80%)
 Frame = +2

Query: 185 QEDYVNNGDHKRKGRTSVSIVLNSIGRKVESGSKKMKKLRRPSAILPVSNG 337
           QED +++G+HKR  R SV  VL SIGR++ESGS+KMK LRR SA+ PVS+G
Sbjct: 24  QEDSIDSGNHKR--RPSVGTVLKSIGRRLESGSEKMKNLRRASAVHPVSDG 72


>ref|XP_003626568.1| Cyclic nucleotide-gated channel C [Medicago truncatula]
           gi|355501583|gb|AES82786.1| Cyclic nucleotide-gated
           channel C [Medicago truncatula]
          Length = 718

 Score = 55.5 bits (132), Expect(2) = 4e-07
 Identities = 34/55 (61%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
 Frame = +2

Query: 176 TIVQEDYVNNGDHKRKGRTSVSIVLNSIGRKVESGSKKMKKLRRPSAIL-PVSNG 337
           +I QE+ VN    KRK R SVS VL SIGR+  SGS+KMKK RRPS+I+ PVS G
Sbjct: 21  SIEQENTVN----KRKERPSVSAVLKSIGRRFVSGSEKMKKFRRPSSIVHPVSEG 71



 Score = 23.5 bits (49), Expect(2) = 4e-07
 Identities = 9/10 (90%), Positives = 10/10 (100%)
 Frame = +1

Query: 148 WRSESSFSID 177
           WRSESSFSI+
Sbjct: 14  WRSESSFSIE 23


>ref|XP_003520870.1| PREDICTED: cyclic nucleotide-gated ion channel 1-like [Glycine max]
          Length = 728

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 31/51 (60%), Positives = 39/51 (76%)
 Frame = +2

Query: 185 QEDYVNNGDHKRKGRTSVSIVLNSIGRKVESGSKKMKKLRRPSAILPVSNG 337
           QE+ +NNG+HKR  R SV  VL SIGR++ES S+KMK L R SA+ PVS+G
Sbjct: 24  QENSINNGNHKR--RPSVGAVLKSIGRRLESVSEKMKNLTRASAVHPVSDG 72


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