BLASTX nr result
ID: Glycyrrhiza23_contig00028301
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza23_contig00028301 (349 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003553784.1| PREDICTED: cyclic nucleotide-gated ion chann... 62 4e-08 ref|XP_003626568.1| Cyclic nucleotide-gated channel C [Medicago ... 55 4e-07 ref|XP_003520870.1| PREDICTED: cyclic nucleotide-gated ion chann... 59 5e-07 >ref|XP_003553784.1| PREDICTED: cyclic nucleotide-gated ion channel 1-like [Glycine max] Length = 716 Score = 62.4 bits (150), Expect = 4e-08 Identities = 32/51 (62%), Positives = 41/51 (80%) Frame = +2 Query: 185 QEDYVNNGDHKRKGRTSVSIVLNSIGRKVESGSKKMKKLRRPSAILPVSNG 337 QED +++G+HKR R SV VL SIGR++ESGS+KMK LRR SA+ PVS+G Sbjct: 24 QEDSIDSGNHKR--RPSVGTVLKSIGRRLESGSEKMKNLRRASAVHPVSDG 72 >ref|XP_003626568.1| Cyclic nucleotide-gated channel C [Medicago truncatula] gi|355501583|gb|AES82786.1| Cyclic nucleotide-gated channel C [Medicago truncatula] Length = 718 Score = 55.5 bits (132), Expect(2) = 4e-07 Identities = 34/55 (61%), Positives = 40/55 (72%), Gaps = 1/55 (1%) Frame = +2 Query: 176 TIVQEDYVNNGDHKRKGRTSVSIVLNSIGRKVESGSKKMKKLRRPSAIL-PVSNG 337 +I QE+ VN KRK R SVS VL SIGR+ SGS+KMKK RRPS+I+ PVS G Sbjct: 21 SIEQENTVN----KRKERPSVSAVLKSIGRRFVSGSEKMKKFRRPSSIVHPVSEG 71 Score = 23.5 bits (49), Expect(2) = 4e-07 Identities = 9/10 (90%), Positives = 10/10 (100%) Frame = +1 Query: 148 WRSESSFSID 177 WRSESSFSI+ Sbjct: 14 WRSESSFSIE 23 >ref|XP_003520870.1| PREDICTED: cyclic nucleotide-gated ion channel 1-like [Glycine max] Length = 728 Score = 58.5 bits (140), Expect = 5e-07 Identities = 31/51 (60%), Positives = 39/51 (76%) Frame = +2 Query: 185 QEDYVNNGDHKRKGRTSVSIVLNSIGRKVESGSKKMKKLRRPSAILPVSNG 337 QE+ +NNG+HKR R SV VL SIGR++ES S+KMK L R SA+ PVS+G Sbjct: 24 QENSINNGNHKR--RPSVGAVLKSIGRRLESVSEKMKNLTRASAVHPVSDG 72