BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00028294
         (310 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003627838.1| DNA-directed RNA polymerase subunit [Medicag...   159   2e-37
ref|XP_003541591.1| PREDICTED: DNA-directed RNA polymerase E sub...   143   2e-32
ref|XP_003545837.1| PREDICTED: DNA-directed RNA polymerase E sub...   140   1e-31
emb|CBI40152.3| unnamed protein product [Vitis vinifera]              123   2e-26
ref|XP_002265533.1| PREDICTED: DNA-directed RNA polymerase E sub...   123   2e-26

>ref|XP_003627838.1| DNA-directed RNA polymerase subunit [Medicago truncatula]
            gi|355521860|gb|AET02314.1| DNA-directed RNA polymerase
            subunit [Medicago truncatula]
          Length = 2032

 Score =  159 bits (403), Expect = 2e-37
 Identities = 75/102 (73%), Positives = 89/102 (87%)
 Frame = -2

Query: 309  YLNDCDCGRSYCREKAACLVKNQLRKVSLKDTAVDFIVEYQQQRKRRDSTEDAGLVGHIH 130
            YLNDCDCGR+YCRE AA LV+NQLRKVSLKD A+DFIVEYQQQR+RRD TEDAGLV HI 
Sbjct: 970  YLNDCDCGRNYCRENAAYLVQNQLRKVSLKDAALDFIVEYQQQRRRRDGTEDAGLVCHIR 1029

Query: 129  LNELMLEELKIDMADVFQRCQDRLNSFNRRKKAYQFLRRTEL 4
            L E+ LEELKI+M +V+Q+CQ++LNSF+R+KK   F +RTEL
Sbjct: 1030 LKEVKLEELKINMTEVYQKCQEKLNSFSRKKKLSPFFKRTEL 1071


>ref|XP_003541591.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Glycine max]
          Length = 2020

 Score =  143 bits (360), Expect = 2e-32
 Identities = 69/103 (66%), Positives = 88/103 (85%), Gaps = 1/103 (0%)
 Frame = -2

Query: 309  YLNDCDCGRSYCREKAACLVKNQLRKVSLKDTAVDFIVEYQQQRKRRDSTE-DAGLVGHI 133
            YLNDCDCG S CRE AA  VKNQLRKVSLK+ AV+FI+EYQQQR +++++E DAGLVGHI
Sbjct: 888  YLNDCDCGGSCCRENAAYSVKNQLRKVSLKNAAVEFIIEYQQQRTQKENSETDAGLVGHI 947

Query: 132  HLNELMLEELKIDMADVFQRCQDRLNSFNRRKKAYQFLRRTEL 4
            +L+E+MLEELKI MA+VF++C +RL SF+R+KK  Q+L+  EL
Sbjct: 948  YLDEMMLEELKISMANVFEKCLERLKSFSRKKKVNQYLKNIEL 990


>ref|XP_003545837.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Glycine max]
          Length = 2098

 Score =  140 bits (352), Expect = 1e-31
 Identities = 68/103 (66%), Positives = 85/103 (82%), Gaps = 1/103 (0%)
 Frame = -2

Query: 309  YLNDCDCGRSYCREKAACLVKNQLRKVSLKDTAVDFIVEYQQQRKRRDSTE-DAGLVGHI 133
            YLNDCDCG SYCRE AA  VK+QLRKVSLKD AV+FI+EYQQQR +++++E D GLVGHI
Sbjct: 888  YLNDCDCGGSYCRENAAYSVKDQLRKVSLKDAAVEFIIEYQQQRTQKENSETDVGLVGHI 947

Query: 132  HLNELMLEELKIDMADVFQRCQDRLNSFNRRKKAYQFLRRTEL 4
            +L+E+MLEELKI MA VF +C +RL SF+++KK  Q L+  EL
Sbjct: 948  YLDEMMLEELKISMAYVFDKCHERLKSFSQKKKVNQSLKNIEL 990


>emb|CBI40152.3| unnamed protein product [Vitis vinifera]
          Length = 1890

 Score =  123 bits (308), Expect = 2e-26
 Identities = 56/100 (56%), Positives = 76/100 (76%), Gaps = 1/100 (1%)
 Frame = -2

Query: 309  YLNDCDCGRSYCREKAACLVKNQLRKVSLKDTAVDFIVEYQQQRKRRDSTE-DAGLVGHI 133
            YLNDCDCGR YCRE AA LVKNQL+K SLKDTAV+F++EY +Q     S+E   GLVGHI
Sbjct: 944  YLNDCDCGRKYCRENAAYLVKNQLKKASLKDTAVEFMIEYVKQHAVSGSSEPGTGLVGHI 1003

Query: 132  HLNELMLEELKIDMADVFQRCQDRLNSFNRRKKAYQFLRR 13
            HLN+L+L++L + M +V Q+C++ +NSF ++K    F ++
Sbjct: 1004 HLNKLLLQDLNVSMQEVCQKCEETINSFRKKKNVGPFFKK 1043


>ref|XP_002265533.1| PREDICTED: DNA-directed RNA polymerase E subunit 1 [Vitis vinifera]
          Length = 1830

 Score =  123 bits (308), Expect = 2e-26
 Identities = 56/100 (56%), Positives = 76/100 (76%), Gaps = 1/100 (1%)
 Frame = -2

Query: 309  YLNDCDCGRSYCREKAACLVKNQLRKVSLKDTAVDFIVEYQQQRKRRDSTE-DAGLVGHI 133
            YLNDCDCGR YCRE AA LVKNQL+K SLKDTAV+F++EY +Q     S+E   GLVGHI
Sbjct: 884  YLNDCDCGRKYCRENAAYLVKNQLKKASLKDTAVEFMIEYVKQHAVSGSSEPGTGLVGHI 943

Query: 132  HLNELMLEELKIDMADVFQRCQDRLNSFNRRKKAYQFLRR 13
            HLN+L+L++L + M +V Q+C++ +NSF ++K    F ++
Sbjct: 944  HLNKLLLQDLNVSMQEVCQKCEETINSFRKKKNVGPFFKK 983