BLASTX nr result

ID: Glycyrrhiza23_contig00028211 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00028211
         (817 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_173490.1| hypothetical protein NitaMp153 [Nicotiana tabac...   196   5e-48
ref|YP_004222249.1| hypothetical protein BevumaM_p010 [Beta vulg...   181   1e-43
ref|XP_002539036.1| conserved hypothetical protein [Ricinus comm...    95   8e-31
ref|XP_002516625.1| conserved hypothetical protein [Ricinus comm...    75   2e-27
gb|ABA99228.1| hypothetical protein LOC_Os12g34000 [Oryza sativa...    69   1e-18

>ref|YP_173490.1| hypothetical protein NitaMp153 [Nicotiana tabacum]
           gi|56806655|dbj|BAD83556.1| hypothetical protein
           (mitochondrion) [Nicotiana tabacum]
          Length = 109

 Score =  196 bits (498), Expect = 5e-48
 Identities = 97/109 (88%), Positives = 99/109 (90%)
 Frame = +3

Query: 390 MLPRHRPTTLRACGVFAGRSLPVVPSSPQAVWAGCPSLLRSVRLWITGTNVVE*DSRRVT 569
           MLPR RPTTLRACGVFA RSLPVVPSSP AVWAGCPSLLRS +LWI GTNVVE +SRRVT
Sbjct: 1   MLPRRRPTTLRACGVFARRSLPVVPSSPLAVWAGCPSLLRSFKLWIKGTNVVEWNSRRVT 60

Query: 570 RSAVPRCEVQVVMITPGYALAPLTGTPGPANAHENPGRSVLHSSDRRCG 716
           RS VPRCEVQVVMITPGYALAPLTGTP PANA ENPGRSVLHSSDRR G
Sbjct: 61  RSTVPRCEVQVVMITPGYALAPLTGTPEPANARENPGRSVLHSSDRRYG 109


>ref|YP_004222249.1| hypothetical protein BevumaM_p010 [Beta vulgaris subsp. maritima]
           gi|346683127|ref|YP_004842056.1| hypothetical protein
           BemaM_p008 [Beta macrocarpa]
           gi|317905687|emb|CBX33234.1| hypothetical protein [Beta
           vulgaris subsp. maritima] gi|319439767|emb|CBX33286.1|
           hypothetical protein [Beta vulgaris subsp. maritima]
           gi|320147999|emb|CBJ20665.1| hypothetical protein [Beta
           vulgaris subsp. maritima] gi|345500045|emb|CBX24861.1|
           hypothetical protein [Beta macrocarpa]
           gi|384939224|emb|CBL52070.1| hypothetical protein
           (mitochondrion) [Beta vulgaris subsp. maritima]
          Length = 145

 Score =  181 bits (460), Expect = 1e-43
 Identities = 91/108 (84%), Positives = 95/108 (87%), Gaps = 3/108 (2%)
 Frame = +3

Query: 390 MLPRHRPTTLRACGVFAGRSLPVVPSSPQAVWAGCPSLLRSVRLWITGTNVVE*DSRRVT 569
           MLPR RPTTLRACGVFA RSLPVVPSSP AVWAGCPSLLRSVRLWI GTNVV+ DS+RVT
Sbjct: 16  MLPRRRPTTLRACGVFARRSLPVVPSSPLAVWAGCPSLLRSVRLWIRGTNVVKWDSKRVT 75

Query: 570 RSAVPRCEVQVVMITPGYALAPLTGTPGPANAHENPG---RSVLHSSD 704
           RS VPRCEVQVVMITPGYALAPLTGTPGPANA ENPG    S+L + D
Sbjct: 76  RSTVPRCEVQVVMITPGYALAPLTGTPGPANARENPGLGRSSILPTGD 123


>ref|XP_002539036.1| conserved hypothetical protein [Ricinus communis]
           gi|223509128|gb|EEF23348.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 76

 Score = 95.1 bits (235), Expect(2) = 8e-31
 Identities = 40/43 (93%), Positives = 41/43 (95%)
 Frame = -3

Query: 518 PNRTQQRGTTRPYSLRGGWHYWQRPSGENAAGAKRGRPVPGEH 390
           PNRTQQRGTTRPYS RGGWHYW+RPSGENAAGAKRGRP PGEH
Sbjct: 1   PNRTQQRGTTRPYSQRGGWHYWKRPSGENAAGAKRGRPAPGEH 43



 Score = 65.5 bits (158), Expect(2) = 8e-31
 Identities = 29/34 (85%), Positives = 30/34 (88%)
 Frame = -2

Query: 387 HR*EREPGRWKSQGGPGHLTEMEDFSPIREGPLK 286
           HR EREPGRWKSQG PGHLTEME FSPI EGP+K
Sbjct: 43  HREEREPGRWKSQGRPGHLTEMEGFSPIIEGPMK 76


>ref|XP_002516625.1| conserved hypothetical protein [Ricinus communis]
           gi|223544227|gb|EEF45749.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 166

 Score = 75.1 bits (183), Expect(2) = 2e-27
 Identities = 37/50 (74%), Positives = 37/50 (74%)
 Frame = +3

Query: 372 PFPTYAMLPRHRPTTLRACGVFAGRSLPVVPSSPQAVWAGCPSLLRSVRL 521
           P     MLPRHRPT LRA GVF  RS  VVPSSP AVW GCPSLLRSVRL
Sbjct: 117 PLSVLPMLPRHRPTMLRAYGVFTRRSFLVVPSSPLAVWVGCPSLLRSVRL 166



 Score = 73.9 bits (180), Expect(2) = 2e-27
 Identities = 43/92 (46%), Positives = 45/92 (48%)
 Frame = +2

Query: 8   RVGAGRSFDQIPLKTVRAGLPACGSRHSRWPSPAFIRKSCSEIETARPRKLIRV*AALSV 187
           RVG G SFDQ+PLKTV AGLP CGS HSRW SPAFI KSCS                   
Sbjct: 39  RVGVGLSFDQVPLKTVCAGLPTCGSCHSRWSSPAFIHKSCSS------------------ 80

Query: 188 VPLTLXXXXXXXXXXXXXGLLPLFPRINALPL 283
                               LPLFPRI+ LPL
Sbjct: 81  --------------------LPLFPRIHVLPL 92


>gb|ABA99228.1| hypothetical protein LOC_Os12g34000 [Oryza sativa Japonica Group]
          Length = 162

 Score = 69.3 bits (168), Expect(2) = 1e-18
 Identities = 30/41 (73%), Positives = 32/41 (78%)
 Frame = -3

Query: 512 RTQQRGTTRPYSLRGGWHYWQRPSGENAAGAKRGRPVPGEH 390
           R+ +   T   SLRGGWHYWQRPSGENAAGAKRG P PGEH
Sbjct: 26  RSSKGQPTHTDSLRGGWHYWQRPSGENAAGAKRGGPAPGEH 66



 Score = 50.1 bits (118), Expect(2) = 1e-18
 Identities = 21/24 (87%), Positives = 22/24 (91%)
 Frame = -2

Query: 387 HR*EREPGRWKSQGGPGHLTEMED 316
           HR EREPGRWKSQG PGHLTEME+
Sbjct: 66  HREEREPGRWKSQGKPGHLTEMEE 89


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