BLASTX nr result

ID: Glycyrrhiza23_contig00028207 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00028207
         (330 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003550468.1| PREDICTED: sister chromatid cohesion protein...    97   1e-18
ref|XP_003529677.1| PREDICTED: sister chromatid cohesion protein...    93   3e-17
ref|XP_003534746.1| PREDICTED: sister chromatid cohesion protein...    84   9e-15
ref|XP_003594308.1| Sister chromatid cohesion protein PDS5-like ...    82   3e-14
ref|XP_003547294.1| PREDICTED: sister chromatid cohesion protein...    78   7e-13

>ref|XP_003550468.1| PREDICTED: sister chromatid cohesion protein PDS5 homolog B-like
           [Glycine max]
          Length = 1642

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 47/52 (90%), Positives = 51/52 (98%)
 Frame = +3

Query: 174 HLQLKELGSKLETIPTSKDFLVKLLKQATTCLAELDQSPLSSTLDSMKPFFN 329
           HLQLKELGSKL+T+PTSKD LVKLLKQATTCLAELDQSPL+STL+SMKPFFN
Sbjct: 3   HLQLKELGSKLQTLPTSKDALVKLLKQATTCLAELDQSPLTSTLESMKPFFN 54


>ref|XP_003529677.1| PREDICTED: sister chromatid cohesion protein PDS5 homolog B-like
           [Glycine max]
          Length = 1641

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 46/51 (90%), Positives = 49/51 (96%)
 Frame = +3

Query: 177 LQLKELGSKLETIPTSKDFLVKLLKQATTCLAELDQSPLSSTLDSMKPFFN 329
           LQLKELGSKLET+PTSKD LVKLLKQATTCLAELDQSP +STL+SMKPFFN
Sbjct: 4   LQLKELGSKLETLPTSKDALVKLLKQATTCLAELDQSPSTSTLESMKPFFN 54


>ref|XP_003534746.1| PREDICTED: sister chromatid cohesion protein PDS5 homolog B-like
           [Glycine max]
          Length = 1648

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 39/57 (68%), Positives = 50/57 (87%)
 Frame = +3

Query: 159 MAQKPHLQLKELGSKLETIPTSKDFLVKLLKQATTCLAELDQSPLSSTLDSMKPFFN 329
           MAQKPHLQL+ELGSKLE++P+  + L +LLKQA +CL +LDQSP +STL+SMKPFF+
Sbjct: 1   MAQKPHLQLEELGSKLESLPSDDNALTELLKQAASCLTDLDQSPSASTLESMKPFFS 57


>ref|XP_003594308.1| Sister chromatid cohesion protein PDS5-like protein [Medicago
           truncatula] gi|124359430|gb|ABN05881.1| HEAT [Medicago
           truncatula] gi|355483356|gb|AES64559.1| Sister chromatid
           cohesion protein PDS5-like protein [Medicago truncatula]
          Length = 1683

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 37/57 (64%), Positives = 48/57 (84%)
 Frame = +3

Query: 159 MAQKPHLQLKELGSKLETIPTSKDFLVKLLKQATTCLAELDQSPLSSTLDSMKPFFN 329
           M QKPHLQLK+LGSKL+ IP+S + L+++LKQA TCL ++DQSP +S L+SMKPF N
Sbjct: 1   MGQKPHLQLKDLGSKLQIIPSSIEVLIQILKQAATCLTDMDQSPSASALESMKPFLN 57


>ref|XP_003547294.1| PREDICTED: sister chromatid cohesion protein PDS5 homolog B-like
           [Glycine max]
          Length = 1656

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 37/56 (66%), Positives = 46/56 (82%)
 Frame = +3

Query: 159 MAQKPHLQLKELGSKLETIPTSKDFLVKLLKQATTCLAELDQSPLSSTLDSMKPFF 326
           MAQKPH QL+ELGSKL++IP+  + L +LLKQA  CL +LDQS  +STL+SMKPFF
Sbjct: 1   MAQKPHFQLEELGSKLQSIPSDDNVLSELLKQAAACLTDLDQSQSASTLESMKPFF 56


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