BLASTX nr result

ID: Glycyrrhiza23_contig00028186 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00028186
         (379 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003602653.1| DNA topoisomerase [Medicago truncatula] gi|3...   102   2e-20
ref|XP_004167550.1| PREDICTED: DNA topoisomerase 3-like, partial...   100   2e-19
ref|XP_004136599.1| PREDICTED: DNA topoisomerase 3-alpha-like [C...   100   2e-19
ref|XP_003526873.1| PREDICTED: DNA topoisomerase 3-alpha [Glycin...    92   4e-17
emb|CBI37515.3| unnamed protein product [Vitis vinifera]               91   1e-16

>ref|XP_003602653.1| DNA topoisomerase [Medicago truncatula] gi|355491701|gb|AES72904.1|
           DNA topoisomerase [Medicago truncatula]
          Length = 587

 Score =  102 bits (255), Expect = 2e-20
 Identities = 48/57 (84%), Positives = 54/57 (94%)
 Frame = -1

Query: 172 MGGRSVNVLNVAEKPSVAKSVANILSRNQGLRVREGRSRYNKIFEFNYSIRGHPCHM 2
           MGGR++ VLNVAEKPSVAKSVA+ILSRNQGLRVR+GRSRYN+IFEFNY+IRG PC M
Sbjct: 1   MGGRAITVLNVAEKPSVAKSVASILSRNQGLRVRDGRSRYNRIFEFNYTIRGQPCQM 57


>ref|XP_004167550.1| PREDICTED: DNA topoisomerase 3-like, partial [Cucumis sativus]
          Length = 607

 Score =  100 bits (248), Expect = 2e-19
 Identities = 48/56 (85%), Positives = 52/56 (92%)
 Frame = -1

Query: 169 GGRSVNVLNVAEKPSVAKSVANILSRNQGLRVREGRSRYNKIFEFNYSIRGHPCHM 2
           GGRS+ VLNVAEKPSVAKSVA ILSRNQGLRVR+GRSRYNKIFEFNY+IRG  C+M
Sbjct: 3   GGRSITVLNVAEKPSVAKSVATILSRNQGLRVRDGRSRYNKIFEFNYAIRGQSCNM 58


>ref|XP_004136599.1| PREDICTED: DNA topoisomerase 3-alpha-like [Cucumis sativus]
          Length = 925

 Score =  100 bits (248), Expect = 2e-19
 Identities = 48/56 (85%), Positives = 52/56 (92%)
 Frame = -1

Query: 169 GGRSVNVLNVAEKPSVAKSVANILSRNQGLRVREGRSRYNKIFEFNYSIRGHPCHM 2
           GGRS+ VLNVAEKPSVAKSVA ILSRNQGLRVR+GRSRYNKIFEFNY+IRG  C+M
Sbjct: 3   GGRSITVLNVAEKPSVAKSVATILSRNQGLRVRDGRSRYNKIFEFNYAIRGQSCNM 58


>ref|XP_003526873.1| PREDICTED: DNA topoisomerase 3-alpha [Glycine max]
          Length = 913

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 42/52 (80%), Positives = 48/52 (92%)
 Frame = -1

Query: 157 VNVLNVAEKPSVAKSVANILSRNQGLRVREGRSRYNKIFEFNYSIRGHPCHM 2
           +NVLNVAEKP VA++VA ILSRNQ +R+REGRSRYNKIFEFNY+IRG PCHM
Sbjct: 1   MNVLNVAEKPMVARTVATILSRNQNMRMREGRSRYNKIFEFNYTIRGQPCHM 52


>emb|CBI37515.3| unnamed protein product [Vitis vinifera]
          Length = 373

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 44/52 (84%), Positives = 47/52 (90%)
 Frame = -1

Query: 157 VNVLNVAEKPSVAKSVANILSRNQGLRVREGRSRYNKIFEFNYSIRGHPCHM 2
           + VLNVAEKPSVAK+VA ILSRNQGLRVREGRSRYNK+FEFNYSIRG  C M
Sbjct: 1   MKVLNVAEKPSVAKAVATILSRNQGLRVREGRSRYNKLFEFNYSIRGQHCQM 52


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