BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00028178
         (912 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003539065.1| PREDICTED: tRNA-specific 2-thiouridylase mnm...   361   1e-97
emb|CBI16383.3| unnamed protein product [Vitis vinifera]              324   3e-87
ref|XP_002282827.1| PREDICTED: tRNA-specific 2-thiouridylase mnm...   324   3e-87
ref|XP_004142116.1| PREDICTED: tRNA-specific 2-thiouridylase Mnm...   313   5e-83
ref|XP_002298404.1| predicted protein [Populus trichocarpa] gi|2...   309   5e-82

>ref|XP_003539065.1| PREDICTED: tRNA-specific 2-thiouridylase mnmA-like [Glycine max]
          Length = 488

 Score =  361 bits (927), Expect = 1e-97
 Identities = 172/190 (90%), Positives = 177/190 (93%)
 Frame = +3

Query: 3   GIILEAETGDFLGKHRGFWFYTIGQRQGLRLPGGPWYVVEKDVKNNVVFVSRNYFSIDKR 182
           G+ILEAETGDFLGKHRGFWFYTIGQRQGLRLPGGPWYVVEKDVKNNVVFVSRNYFS DKR
Sbjct: 282 GVILEAETGDFLGKHRGFWFYTIGQRQGLRLPGGPWYVVEKDVKNNVVFVSRNYFSFDKR 341

Query: 183 RRVFRVGSLKWLSGLPPSQTSQLQCKVRHGPGFYNCSLQMEVEGDDLEESAVVRISEDDQ 362
           RRVFRVGS KWLSGLPP QT+QLQCKVRHGPGFY+CSLQMEVE D    SAVVRISEDDQ
Sbjct: 342 RRVFRVGSFKWLSGLPPGQTTQLQCKVRHGPGFYDCSLQMEVEADGQCHSAVVRISEDDQ 401

Query: 363 GLAAGQFTAFYDGRTCIGSGVILESWDDQSLPVCAKALEIARMEDKSKIGNPVKIKVKPD 542
           GLAAGQF AFY+GRTCIGSGVILE WDDQS PVC KALEIARMEDKSKIGNPVKIKVKPD
Sbjct: 402 GLAAGQFAAFYEGRTCIGSGVILEFWDDQSFPVCTKALEIARMEDKSKIGNPVKIKVKPD 461

Query: 543 NPQDVCDSTE 572
           NPQ+VCDS E
Sbjct: 462 NPQEVCDSAE 471


>emb|CBI16383.3| unnamed protein product [Vitis vinifera]
          Length = 544

 Score =  324 bits (830), Expect(2) = 3e-87
 Identities = 154/190 (81%), Positives = 166/190 (87%)
 Frame = +3

Query: 3   GIILEAETGDFLGKHRGFWFYTIGQRQGLRLPGGPWYVVEKDVKNNVVFVSRNYFSIDKR 182
           GIILEAETGD LGKHRGFWFYTIGQRQGLRLPGGPWYVVEKDVKNNVVFVSRNYFS+DKR
Sbjct: 308 GIILEAETGDLLGKHRGFWFYTIGQRQGLRLPGGPWYVVEKDVKNNVVFVSRNYFSLDKR 367

Query: 183 RRVFRVGSLKWLSGLPPSQTSQLQCKVRHGPGFYNCSLQMEVEGDDLEESAVVRISEDDQ 362
           RR+FRVGSLKW+S  PP Q +QLQCKVRHGPGFYNCS  ME   D  E+ AVV++SEDDQ
Sbjct: 368 RRLFRVGSLKWISREPPGQINQLQCKVRHGPGFYNCSFTMEPGEDGHEDVAVVQLSEDDQ 427

Query: 363 GLAAGQFTAFYDGRTCIGSGVILESWDDQSLPVCAKALEIARMEDKSKIGNPVKIKVKPD 542
           GLAAGQFTAFY GR+CIGSGVILESWDDQ  PVCAKALEIARMEDKSK+G PVKIKV+P+
Sbjct: 428 GLAAGQFTAFYQGRSCIGSGVILESWDDQGFPVCAKALEIARMEDKSKLGKPVKIKVRPE 487

Query: 543 NPQDVCDSTE 572
            P    D  +
Sbjct: 488 TPPKGSDQID 497



 Score = 25.0 bits (53), Expect(2) = 3e-87
 Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
 Frame = +1

Query: 580 VKHHKGVRNYRVAATEQNKQTYQRNAVSIFPFNRLQK---KW 696
           +K  + + N + A T++  ++ +  A S FP N LQK   KW
Sbjct: 499 IKLDRELANSQAAVTDEISRSSEGEARSRFPMNWLQKIREKW 540


>ref|XP_002282827.1| PREDICTED: tRNA-specific 2-thiouridylase mnmA-like [Vitis vinifera]
          Length = 540

 Score =  324 bits (830), Expect(2) = 3e-87
 Identities = 154/190 (81%), Positives = 166/190 (87%)
 Frame = +3

Query: 3   GIILEAETGDFLGKHRGFWFYTIGQRQGLRLPGGPWYVVEKDVKNNVVFVSRNYFSIDKR 182
           GIILEAETGD LGKHRGFWFYTIGQRQGLRLPGGPWYVVEKDVKNNVVFVSRNYFS+DKR
Sbjct: 304 GIILEAETGDLLGKHRGFWFYTIGQRQGLRLPGGPWYVVEKDVKNNVVFVSRNYFSLDKR 363

Query: 183 RRVFRVGSLKWLSGLPPSQTSQLQCKVRHGPGFYNCSLQMEVEGDDLEESAVVRISEDDQ 362
           RR+FRVGSLKW+S  PP Q +QLQCKVRHGPGFYNCS  ME   D  E+ AVV++SEDDQ
Sbjct: 364 RRLFRVGSLKWISREPPGQINQLQCKVRHGPGFYNCSFTMEPGEDGHEDVAVVQLSEDDQ 423

Query: 363 GLAAGQFTAFYDGRTCIGSGVILESWDDQSLPVCAKALEIARMEDKSKIGNPVKIKVKPD 542
           GLAAGQFTAFY GR+CIGSGVILESWDDQ  PVCAKALEIARMEDKSK+G PVKIKV+P+
Sbjct: 424 GLAAGQFTAFYQGRSCIGSGVILESWDDQGFPVCAKALEIARMEDKSKLGKPVKIKVRPE 483

Query: 543 NPQDVCDSTE 572
            P    D  +
Sbjct: 484 TPPKGSDQID 493



 Score = 25.0 bits (53), Expect(2) = 3e-87
 Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
 Frame = +1

Query: 580 VKHHKGVRNYRVAATEQNKQTYQRNAVSIFPFNRLQK---KW 696
           +K  + + N + A T++  ++ +  A S FP N LQK   KW
Sbjct: 495 IKLDRELANSQAAVTDEISRSSEGEARSRFPMNWLQKIREKW 536


>ref|XP_004142116.1| PREDICTED: tRNA-specific 2-thiouridylase MnmA-like [Cucumis
           sativus] gi|449524848|ref|XP_004169433.1| PREDICTED:
           tRNA-specific 2-thiouridylase MnmA-like [Cucumis
           sativus]
          Length = 538

 Score =  313 bits (801), Expect = 5e-83
 Identities = 145/181 (80%), Positives = 161/181 (88%)
 Frame = +3

Query: 3   GIILEAETGDFLGKHRGFWFYTIGQRQGLRLPGGPWYVVEKDVKNNVVFVSRNYFSIDKR 182
           G+ILEAE+GDFLGKHRGFWFYTIGQRQGLRLPGGPWYVVEKD+KNNVVFVSRNYFS DKR
Sbjct: 302 GVILEAESGDFLGKHRGFWFYTIGQRQGLRLPGGPWYVVEKDIKNNVVFVSRNYFSFDKR 361

Query: 183 RRVFRVGSLKWLSGLPPSQTSQLQCKVRHGPGFYNCSLQMEVEGDDLEESAVVRISEDDQ 362
           RRVFRVGSLKWLSG PP Q ++LQCKVRHGP FY+C+L ME   D  E+ AVV +SEDDQ
Sbjct: 362 RRVFRVGSLKWLSGFPPDQFTELQCKVRHGPSFYSCNLTMEHSEDGHEDVAVVHLSEDDQ 421

Query: 363 GLAAGQFTAFYDGRTCIGSGVILESWDDQSLPVCAKALEIARMEDKSKIGNPVKIKVKPD 542
           GLAAGQF AFY GR+CIGSGVILESWDDQ  PVC KA+E A+MEDKSK+G P+KIKVKP+
Sbjct: 422 GLAAGQFAAFYKGRSCIGSGVILESWDDQGFPVCQKAIENAQMEDKSKLGKPIKIKVKPE 481

Query: 543 N 545
           +
Sbjct: 482 S 482


>ref|XP_002298404.1| predicted protein [Populus trichocarpa] gi|222845662|gb|EEE83209.1|
           predicted protein [Populus trichocarpa]
          Length = 434

 Score =  309 bits (792), Expect = 5e-82
 Identities = 145/180 (80%), Positives = 159/180 (88%)
 Frame = +3

Query: 3   GIILEAETGDFLGKHRGFWFYTIGQRQGLRLPGGPWYVVEKDVKNNVVFVSRNYFSIDKR 182
           G+ILEAETGDFLG HRGFWFYTIGQRQGLRLPGGPWYVVEKDVKNNVVFVSRNYFS+DKR
Sbjct: 228 GVILEAETGDFLGIHRGFWFYTIGQRQGLRLPGGPWYVVEKDVKNNVVFVSRNYFSLDKR 287

Query: 183 RRVFRVGSLKWLSGLPPSQTSQLQCKVRHGPGFYNCSLQMEVEGDDLEESAVVRISEDDQ 362
           RR FRVGSLKWLSG P   T+QLQCKVRHGP FY+CS+++E+  D  EE   V + EDDQ
Sbjct: 288 RRSFRVGSLKWLSGSPTDMTTQLQCKVRHGPTFYDCSVKIELGEDSPEEVVAVHLCEDDQ 347

Query: 363 GLAAGQFTAFYDGRTCIGSGVILESWDDQSLPVCAKALEIARMEDKSKIGNPVKIKVKPD 542
           GLAAGQFTAFY GRTCIGSGVILESWDD+  PVC KALE+AR+EDKSK+G PVKIKVKP+
Sbjct: 348 GLAAGQFTAFYQGRTCIGSGVILESWDDKGFPVCQKALELARLEDKSKLGKPVKIKVKPE 407