BLASTX nr result

ID: Glycyrrhiza23_contig00028169 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00028169
         (380 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003542330.1| PREDICTED: zinc finger CCCH domain-containin...   147   9e-34
dbj|BAK01344.1| predicted protein [Hordeum vulgare subsp. vulgare]    110   1e-22
ref|XP_002279554.2| PREDICTED: zinc finger CCCH domain-containin...   108   5e-22
emb|CBI27906.3| unnamed protein product [Vitis vinifera]              108   5e-22
ref|XP_004135717.1| PREDICTED: zinc finger CCCH domain-containin...   107   8e-22

>ref|XP_003542330.1| PREDICTED: zinc finger CCCH domain-containing protein 64-like
           [Glycine max]
          Length = 601

 Score =  147 bits (371), Expect = 9e-34
 Identities = 68/77 (88%), Positives = 74/77 (96%)
 Frame = +3

Query: 3   INGNLSLFYAEVPGGTILLHHVEEKERFPAQFGREVMAGLLNMADNADWRNCKHSKDEEM 182
           I+G+ SLFYA++PGGTILLHHVEEKE+FPAQFGREV+AGLLNMADNADWRN KHSKDEEM
Sbjct: 525 IDGDSSLFYAQIPGGTILLHHVEEKEKFPAQFGREVLAGLLNMADNADWRNRKHSKDEEM 584

Query: 183 KIVEDFKSRFQEYDPNC 233
           KIVE FKSRFQEYDPNC
Sbjct: 585 KIVEVFKSRFQEYDPNC 601


>dbj|BAK01344.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 608

 Score =  110 bits (275), Expect = 1e-22
 Identities = 48/74 (64%), Positives = 62/74 (83%)
 Frame = +3

Query: 6   NGNLSLFYAEVPGGTILLHHVEEKERFPAQFGREVMAGLLNMADNADWRNCKHSKDEEMK 185
           +G   LFY E+P GT+LLH ++  E+FPAQFGREV+AGLL+MAD ADWRNCK SK+EE+K
Sbjct: 533 DGKSGLFYVELPDGTLLLHMIDSGEKFPAQFGREVLAGLLSMADRADWRNCKLSKEEEVK 592

Query: 186 IVEDFKSRFQEYDP 227
           +V+DFK  F+E+DP
Sbjct: 593 MVDDFKQGFREFDP 606


>ref|XP_002279554.2| PREDICTED: zinc finger CCCH domain-containing protein 64-like
           [Vitis vinifera]
          Length = 607

 Score =  108 bits (270), Expect = 5e-22
 Identities = 46/71 (64%), Positives = 60/71 (84%)
 Frame = +3

Query: 15  LSLFYAEVPGGTILLHHVEEKERFPAQFGREVMAGLLNMADNADWRNCKHSKDEEMKIVE 194
           +S FY E+P GTIL H +E+ E+FP QFGREV+AGLLNMAD ADWRNCK SK++EMK+ E
Sbjct: 535 ISFFYVELPDGTILSHAIEDNEKFPVQFGREVLAGLLNMADRADWRNCKQSKEDEMKMAE 594

Query: 195 DFKSRFQEYDP 227
            FK++F+++DP
Sbjct: 595 VFKNQFKKFDP 605


>emb|CBI27906.3| unnamed protein product [Vitis vinifera]
          Length = 593

 Score =  108 bits (270), Expect = 5e-22
 Identities = 46/71 (64%), Positives = 60/71 (84%)
 Frame = +3

Query: 15  LSLFYAEVPGGTILLHHVEEKERFPAQFGREVMAGLLNMADNADWRNCKHSKDEEMKIVE 194
           +S FY E+P GTIL H +E+ E+FP QFGREV+AGLLNMAD ADWRNCK SK++EMK+ E
Sbjct: 521 ISFFYVELPDGTILSHAIEDNEKFPVQFGREVLAGLLNMADRADWRNCKQSKEDEMKMAE 580

Query: 195 DFKSRFQEYDP 227
            FK++F+++DP
Sbjct: 581 VFKNQFKKFDP 591


>ref|XP_004135717.1| PREDICTED: zinc finger CCCH domain-containing protein 64-like
           [Cucumis sativus] gi|449489882|ref|XP_004158448.1|
           PREDICTED: zinc finger CCCH domain-containing protein
           64-like [Cucumis sativus]
          Length = 606

 Score =  107 bits (268), Expect = 8e-22
 Identities = 49/71 (69%), Positives = 56/71 (78%)
 Frame = +3

Query: 18  SLFYAEVPGGTILLHHVEEKERFPAQFGREVMAGLLNMADNADWRNCKHSKDEEMKIVED 197
           S FYAE+P    L H +EE E FPAQFGREV+AGLLNMAD ADWRNC HSK+EE K+ ED
Sbjct: 535 SFFYAELPECVTLSHVIEENEIFPAQFGREVLAGLLNMADKADWRNCAHSKEEETKMAED 594

Query: 198 FKSRFQEYDPN 230
           FK RF+ +DPN
Sbjct: 595 FKIRFENFDPN 605


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