BLASTX nr result

ID: Glycyrrhiza23_contig00028163 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00028163
         (303 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABI34306.1| Polyprotein, putative [Solanum demissum]                61   8e-08
gb|AAU90333.1| Putative gag and pol polyprotein, identical [Sola...    61   1e-07
ref|XP_003551572.1| PREDICTED: uncharacterized protein LOC100804...    58   9e-07
ref|XP_003631792.1| PREDICTED: uncharacterized protein LOC100252...    57   1e-06
emb|CAN76029.1| hypothetical protein VITISV_016069 [Vitis vinifera]    57   1e-06

>gb|ABI34306.1| Polyprotein, putative [Solanum demissum]
          Length = 1691

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 28/61 (45%), Positives = 40/61 (65%), Gaps = 1/61 (1%)
 Frame = -2

Query: 182 IAMISEINSVGGSEEWLVDTGTTRHVCYDKSLFKTYS-VANNQNVLLEDSHTTVVIGIGE 6
           +A+I++IN V   + W  D+G  RHVCYDK  FK Y+     + ++L DSHTT V+G G+
Sbjct: 295 VAVITDINMVENVDGWWADSGANRHVCYDKDWFKKYTHFEEPKTIMLGDSHTTQVLGTGD 354

Query: 5   V 3
           V
Sbjct: 355 V 355


>gb|AAU90333.1| Putative gag and pol polyprotein, identical [Solanum demissum]
          Length = 853

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 28/61 (45%), Positives = 41/61 (67%), Gaps = 1/61 (1%)
 Frame = -2

Query: 182 IAMISEINSVGGSEEWLVDTGTTRHVCYDKSLFKTYS-VANNQNVLLEDSHTTVVIGIGE 6
           +A+I++IN V   + W VD+G  RHVCYDK  FK Y+     + ++L D+HTT V+G G+
Sbjct: 142 VAVITDINMVENVDGWWVDSGANRHVCYDKDWFKKYTHFEEPKTIMLGDAHTTQVLGKGD 201

Query: 5   V 3
           V
Sbjct: 202 V 202


>ref|XP_003551572.1| PREDICTED: uncharacterized protein LOC100804842 [Glycine max]
          Length = 651

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 26/48 (54%), Positives = 33/48 (68%)
 Frame = -2

Query: 146 SEEWLVDTGTTRHVCYDKSLFKTYSVANNQNVLLEDSHTTVVIGIGEV 3
           S+ W VDTG +R+VCYD+ + KTY    N+ VLL DSHTT V G  +V
Sbjct: 374 SDGWGVDTGASRYVCYDRVMIKTYMNVENKKVLLGDSHTTTVAGTRDV 421


>ref|XP_003631792.1| PREDICTED: uncharacterized protein LOC100252656 [Vitis vinifera]
          Length = 946

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 27/61 (44%), Positives = 42/61 (68%), Gaps = 2/61 (3%)
 Frame = -2

Query: 179 AMISEINSVGGS-EEWLVDTGTTRHVCYDKSLFKTYS-VANNQNVLLEDSHTTVVIGIGE 6
           A++SE+N VG + +EW +DTG TRHVC DK +F T+  + N + V + +S T+ + G G+
Sbjct: 321 AVVSEVNLVGSNPKEWWIDTGATRHVCSDKKMFSTFEPIENGEKVFMGNSTTSEIKGQGK 380

Query: 5   V 3
           V
Sbjct: 381 V 381


>emb|CAN76029.1| hypothetical protein VITISV_016069 [Vitis vinifera]
          Length = 1096

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 27/61 (44%), Positives = 42/61 (68%), Gaps = 2/61 (3%)
 Frame = -2

Query: 179 AMISEINSVGGS-EEWLVDTGTTRHVCYDKSLFKTYS-VANNQNVLLEDSHTTVVIGIGE 6
           A++SE+N VG + +EW +DTG TRHVC DK +F T+  + N + V + +S T+ + G G+
Sbjct: 242 AVVSEVNLVGSNPKEWWIDTGATRHVCSDKKMFSTFEPIENGEKVFMGNSATSEIKGQGK 301

Query: 5   V 3
           V
Sbjct: 302 V 302


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