BLASTX nr result

ID: Glycyrrhiza23_contig00028140 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00028140
         (689 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003534335.1| PREDICTED: alkylated DNA repair protein alkB...   271   9e-71
ref|XP_003612528.1| Alkylated DNA repair protein alkB-like prote...   258   8e-67
emb|CBI29214.3| unnamed protein product [Vitis vinifera]              208   7e-52
ref|XP_002270503.1| PREDICTED: alkylated DNA repair protein alkB...   208   7e-52
ref|XP_002519921.1| nucleic acid binding protein, putative [Rici...   196   4e-48

>ref|XP_003534335.1| PREDICTED: alkylated DNA repair protein alkB homolog 8-like
           [Glycine max]
          Length = 342

 Score =  271 bits (693), Expect = 9e-71
 Identities = 132/154 (85%), Positives = 143/154 (92%)
 Frame = -2

Query: 463 MGLPRFGRPKNNGELSSNLYVANCGPAVGLSDDDIASVFCKFGELKGVYAADESGTRVIV 284
           MGLPRFGRPKN+GELSSNL+VANCG AVGLSDDDIASVFCKFGELKGVYAADESGTRVIV
Sbjct: 1   MGLPRFGRPKNDGELSSNLFVANCGSAVGLSDDDIASVFCKFGELKGVYAADESGTRVIV 60

Query: 283 SYSEVCSAQAAIEALHGRPCPQLGGRSLHISYSVLQPNPQDQVRDLVPVSITASDLSIPG 104
           +Y E  SAQAA++ALHG+ CP+LGGRSLHI YSVLQP PQDQ  DLVPVSITASD+SIPG
Sbjct: 61  AYVEEGSAQAALKALHGQSCPELGGRSLHIRYSVLQPTPQDQASDLVPVSITASDVSIPG 120

Query: 103 IYLVHDLVSAKEEEELLQAVDCRPWNCLSKRRVQ 2
           ++LVHD +SAKEEEELLQAVDCRPWN LSKRRVQ
Sbjct: 121 LFLVHDFISAKEEEELLQAVDCRPWNSLSKRRVQ 154


>ref|XP_003612528.1| Alkylated DNA repair protein alkB-like protein [Medicago
           truncatula] gi|355513863|gb|AES95486.1| Alkylated DNA
           repair protein alkB-like protein [Medicago truncatula]
          Length = 344

 Score =  258 bits (659), Expect = 8e-67
 Identities = 125/154 (81%), Positives = 141/154 (91%)
 Frame = -2

Query: 463 MGLPRFGRPKNNGELSSNLYVANCGPAVGLSDDDIASVFCKFGELKGVYAADESGTRVIV 284
           MGLPRFGRPKN  ELSSNL+VANCGPAVG+SDD+IASVF KFGEL GVYAAD+SGTRVIV
Sbjct: 1   MGLPRFGRPKNGDELSSNLFVANCGPAVGISDDEIASVFSKFGELNGVYAADDSGTRVIV 60

Query: 283 SYSEVCSAQAAIEALHGRPCPQLGGRSLHISYSVLQPNPQDQVRDLVPVSITASDLSIPG 104
           S+S+V SAQ+A  ALHG+PCP+LGGRSL I YSVLQPNPQDQV+DLVPVS+TASDL+IPG
Sbjct: 61  SFSDVGSAQSAFMALHGKPCPELGGRSLFIRYSVLQPNPQDQVKDLVPVSMTASDLNIPG 120

Query: 103 IYLVHDLVSAKEEEELLQAVDCRPWNCLSKRRVQ 2
           +YL+HD VSA EEEELLQ+VD RPWN L+KRRVQ
Sbjct: 121 LYLLHDFVSATEEEELLQSVDSRPWNSLAKRRVQ 154


>emb|CBI29214.3| unnamed protein product [Vitis vinifera]
          Length = 912

 Score =  208 bits (530), Expect = 7e-52
 Identities = 110/155 (70%), Positives = 121/155 (78%), Gaps = 1/155 (0%)
 Frame = -2

Query: 463  MGLPRFGRPKN-NGELSSNLYVANCGPAVGLSDDDIASVFCKFGELKGVYAADESGTRVI 287
            MGLPRF RPK  +GELS NLYVANCGPAVGLS D IASVF  FGE+KGVY AD+SG RVI
Sbjct: 573  MGLPRFSRPKGVDGELSPNLYVANCGPAVGLSFDTIASVFSTFGEVKGVYPADDSGARVI 632

Query: 286  VSYSEVCSAQAAIEALHGRPCPQLGGRSLHISYSVLQPNPQDQVRDLVPVSITASDLSIP 107
            VSY E  +AQAA++AL G PCP LGGR LHI YS+ Q  P  QV D VPVS+  S+L+IP
Sbjct: 633  VSYFEESAAQAALKALDGHPCPALGGRFLHIRYSIFQ--PPSQVNDSVPVSLVDSELNIP 690

Query: 106  GIYLVHDLVSAKEEEELLQAVDCRPWNCLSKRRVQ 2
            GIYL+HD VSAKEEEELL AVD   W  LSKRRVQ
Sbjct: 691  GIYLLHDFVSAKEEEELLAAVDKMSWKSLSKRRVQ 725


>ref|XP_002270503.1| PREDICTED: alkylated DNA repair protein alkB homolog 8-like [Vitis
           vinifera]
          Length = 349

 Score =  208 bits (530), Expect = 7e-52
 Identities = 110/155 (70%), Positives = 121/155 (78%), Gaps = 1/155 (0%)
 Frame = -2

Query: 463 MGLPRFGRPKN-NGELSSNLYVANCGPAVGLSDDDIASVFCKFGELKGVYAADESGTRVI 287
           MGLPRF RPK  +GELS NLYVANCGPAVGLS D IASVF  FGE+KGVY AD+SG RVI
Sbjct: 10  MGLPRFSRPKGVDGELSPNLYVANCGPAVGLSFDTIASVFSTFGEVKGVYPADDSGARVI 69

Query: 286 VSYSEVCSAQAAIEALHGRPCPQLGGRSLHISYSVLQPNPQDQVRDLVPVSITASDLSIP 107
           VSY E  +AQAA++AL G PCP LGGR LHI YS+ Q  P  QV D VPVS+  S+L+IP
Sbjct: 70  VSYFEESAAQAALKALDGHPCPALGGRFLHIRYSIFQ--PPSQVNDSVPVSLVDSELNIP 127

Query: 106 GIYLVHDLVSAKEEEELLQAVDCRPWNCLSKRRVQ 2
           GIYL+HD VSAKEEEELL AVD   W  LSKRRVQ
Sbjct: 128 GIYLLHDFVSAKEEEELLAAVDKMSWKSLSKRRVQ 162


>ref|XP_002519921.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223540967|gb|EEF42525.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 421

 Score =  196 bits (498), Expect = 4e-48
 Identities = 104/161 (64%), Positives = 124/161 (77%), Gaps = 3/161 (1%)
 Frame = -2

Query: 475 IIEEMGL--PRFGRPKNNGE-LSSNLYVANCGPAVGLSDDDIASVFCKFGELKGVYAADE 305
           ++  MGL  PRF RPK   E L+ NLYVANCGPAVG+S + I SVF  FGE+KGVYAADE
Sbjct: 33  LVSIMGLTRPRFTRPKGVDEHLNPNLYVANCGPAVGISYEMIESVFSSFGEVKGVYAADE 92

Query: 304 SGTRVIVSYSEVCSAQAAIEALHGRPCPQLGGRSLHISYSVLQPNPQDQVRDLVPVSITA 125
           SG RVIVSY EV SAQ+A  +L G+PCP+ GGR LHI +SVLQP    +V D +PVS+ A
Sbjct: 93  SGARVIVSYFEVSSAQSAFNSLSGKPCPRFGGRYLHIRFSVLQPT--CEVNDSIPVSLVA 150

Query: 124 SDLSIPGIYLVHDLVSAKEEEELLQAVDCRPWNCLSKRRVQ 2
           S+L+IPG+YL+ D VSA+EE+ELL AVD RPW  LSKRRVQ
Sbjct: 151 SELNIPGLYLLPDFVSAEEEQELLAAVDARPWKSLSKRRVQ 191


Top