BLASTX nr result

ID: Glycyrrhiza23_contig00028125 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00028125
         (307 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003528426.1| PREDICTED: uncharacterized protein LOC100787...   126   2e-27
ref|XP_003532564.1| PREDICTED: uncharacterized protein LOC100810...   125   5e-27
ref|XP_003608271.1| Lysine-specific demethylase 3B [Medicago tru...   122   2e-26
gb|ABN06047.1| Zinc finger, RING-type; Transcription factor jumo...   122   2e-26
ref|XP_002524700.1| conserved hypothetical protein [Ricinus comm...   114   1e-23

>ref|XP_003528426.1| PREDICTED: uncharacterized protein LOC100787798 [Glycine max]
          Length = 1030

 Score =  126 bits (317), Expect = 2e-27
 Identities = 61/95 (64%), Positives = 70/95 (73%), Gaps = 14/95 (14%)
 Frame = +2

Query: 56  PLPDHLRCGRTDGRQWRCRRRVMDNLKLCEIHYLQGKHRQYKEKVPESLKLQRKRK---- 223
           PLPDHLRCGRTDGRQWRCRRRV +NLKLCEIHYLQG+HRQYKEKVPESLKLQRKRK    
Sbjct: 13  PLPDHLRCGRTDGRQWRCRRRVKENLKLCEIHYLQGRHRQYKEKVPESLKLQRKRKSNND 72

Query: 224 ----------EKDIAVVDNAETRARQVCKIATKRK 298
                       +  + DN E+RAR+  +I  K++
Sbjct: 73  EEEEPEPDNNNNNNVLDDNVESRARRTSRIVKKKR 107


>ref|XP_003532564.1| PREDICTED: uncharacterized protein LOC100810673 [Glycine max]
          Length = 1047

 Score =  125 bits (313), Expect = 5e-27
 Identities = 62/104 (59%), Positives = 71/104 (68%), Gaps = 23/104 (22%)
 Frame = +2

Query: 56  PLPDHLRCGRTDGRQWRCRRRVMDNLKLCEIHYLQGKHRQYKEKVPESLKLQRKRK---- 223
           PLPDHLRCGRTDGRQWRCRRRV +NLKLCEIHYLQG+HRQYKEKVPESLKLQRKRK    
Sbjct: 13  PLPDHLRCGRTDGRQWRCRRRVKENLKLCEIHYLQGRHRQYKEKVPESLKLQRKRKSNNN 72

Query: 224 -------------------EKDIAVVDNAETRARQVCKIATKRK 298
                              +K   + DN E+RAR+  +I  K++
Sbjct: 73  NNNNNEEEEEEEEEEKPEPDKKNVLDDNVESRARRTSRIVKKKR 116


>ref|XP_003608271.1| Lysine-specific demethylase 3B [Medicago truncatula]
           gi|355509326|gb|AES90468.1| Lysine-specific demethylase
           3B [Medicago truncatula]
          Length = 1282

 Score =  122 bits (307), Expect = 2e-26
 Identities = 60/92 (65%), Positives = 70/92 (76%), Gaps = 9/92 (9%)
 Frame = +2

Query: 59  LPDHLRCGRTDGRQWRCRRRVMDNLKLCEIHYLQGKHRQYKEKVPESLKLQRKRKEKD-- 232
           LPD LRCGRTDG+QWRC+RRVMDNLKLCEIHYLQGKHRQY+EKVPESLKLQRKRK K+  
Sbjct: 13  LPDELRCGRTDGKQWRCKRRVMDNLKLCEIHYLQGKHRQYREKVPESLKLQRKRKNKEEE 72

Query: 233 -----IAVVDNAE--TRARQVCKIATKRKRKK 307
                +  VDN E   R  +  K+  ++ +KK
Sbjct: 73  QEQETVVGVDNVEETVRVEKEFKMELRKTKKK 104


>gb|ABN06047.1| Zinc finger, RING-type; Transcription factor jumonji, jmjC; Zinc
           finger, C2H2-type [Medicago truncatula]
          Length = 1183

 Score =  122 bits (307), Expect = 2e-26
 Identities = 60/92 (65%), Positives = 70/92 (76%), Gaps = 9/92 (9%)
 Frame = +2

Query: 59  LPDHLRCGRTDGRQWRCRRRVMDNLKLCEIHYLQGKHRQYKEKVPESLKLQRKRKEKD-- 232
           LPD LRCGRTDG+QWRC+RRVMDNLKLCEIHYLQGKHRQY+EKVPESLKLQRKRK K+  
Sbjct: 13  LPDELRCGRTDGKQWRCKRRVMDNLKLCEIHYLQGKHRQYREKVPESLKLQRKRKNKEEE 72

Query: 233 -----IAVVDNAE--TRARQVCKIATKRKRKK 307
                +  VDN E   R  +  K+  ++ +KK
Sbjct: 73  QEQETVVGVDNVEETVRVEKEFKMELRKTKKK 104


>ref|XP_002524700.1| conserved hypothetical protein [Ricinus communis]
           gi|223536061|gb|EEF37719.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1033

 Score =  114 bits (284), Expect = 1e-23
 Identities = 58/94 (61%), Positives = 69/94 (73%), Gaps = 10/94 (10%)
 Frame = +2

Query: 56  PLPDHLRCGRTDGRQWRCRRRVMDNLKLCEIHYLQGKHRQYKEKVPESLKLQRKRKEKDI 235
           PLP+HLRC RTDGRQWRC RRVMD+ KLCEIH+LQG+HRQYK KVPESLKLQRK  +K  
Sbjct: 7   PLPEHLRCKRTDGRQWRCNRRVMDDKKLCEIHHLQGRHRQYKRKVPESLKLQRKYNKKLK 66

Query: 236 A----VVDNAETRAR------QVCKIATKRKRKK 307
           A    + DN E RA+      ++ K+   +KRKK
Sbjct: 67  ANADSISDNLEIRAQKEERFSRLVKLGKLKKRKK 100


Top